BLASTX nr result

ID: Cocculus23_contig00041888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00041888
         (355 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62051.1| hypothetical protein VITISV_016641 [Vitis vinifera]    47   2e-07
emb|CAN61757.1| hypothetical protein VITISV_030741 [Vitis vinifera]    45   8e-07
emb|CAN66445.1| hypothetical protein VITISV_003574 [Vitis vinifera]    38   8e-06

>emb|CAN62051.1| hypothetical protein VITISV_016641 [Vitis vinifera]
          Length = 1866

 Score = 46.6 bits (109), Expect(2) = 2e-07
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
 Frame = +1

Query: 88   LPVSLHKKIWDRWAYFSRHKVTKSVSMASILEEHIRANGSVNVKAVSII-AKLAILWVIW 264
            L  SL K +W R    ++       S++ +   +    GS     V    A +A++WV+W
Sbjct: 1754 LHCSLTKGLWHRLFQLAKMDWVSPRSISDMFFTNFNGFGSSKRGVVLWQDACIALMWVVW 1813

Query: 265  LSRNKRIFEGKDEDWSCVFESSKLLASRW 351
              RN RIFE K  +  C+++S + LAS W
Sbjct: 1814 RERNARIFEDKARNSGCLWDSIRFLASLW 1842



 Score = 33.9 bits (76), Expect(2) = 2e-07
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 3    QKRMPFIYVSPHCCHLCLKEGESADHI 83
            Q R P   +SP+ C LC+K GE+ DH+
Sbjct: 1726 QLRRPHKALSPNICKLCMKHGETVDHL 1752


>emb|CAN61757.1| hypothetical protein VITISV_030741 [Vitis vinifera]
          Length = 1306

 Score = 44.7 bits (104), Expect(2) = 8e-07
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = +1

Query: 88   LPVSLHKKIWDRWAYFSRHKVTKSVSMASILEEHIRANGSVNVKAVSII-AKLAILWVIW 264
            L  SL K +W R    ++       S++ +   +    GS     V    A +A++WV+W
Sbjct: 1194 LHCSLTKGLWHRLFQLAKMDWVSPRSISDMFFTNFNGFGSSKRGVVLWQDACIALMWVVW 1253

Query: 265  LSRNKRIFEGKDEDWSCVFESSKLLASRW 351
              RN RIFE K  +  C+++S   LAS W
Sbjct: 1254 RERNARIFEDKARNSGCLWDSICFLASLW 1282



 Score = 33.9 bits (76), Expect(2) = 8e-07
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 3    QKRMPFIYVSPHCCHLCLKEGESADHI 83
            Q R P   +SP+ C LC+K GE+ DH+
Sbjct: 1166 QLRRPHKALSPNICKLCMKHGETVDHL 1192


>emb|CAN66445.1| hypothetical protein VITISV_003574 [Vitis vinifera]
          Length = 1290

 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = +1

Query: 88  LPVSLHKKIWDRWAYFSRHKVTKSVSMASILEEHIRANGSVNVKAVSII---AKLAILWV 258
           L  SL  ++W R    ++  +    S+  ++   I+ NG  + K   ++   A +A++ V
Sbjct: 667 LHCSLTIRLWHRLFQLAKMDLVPPRSIFDMMS--IKFNGFGSSKRGLVLWQAASIALIRV 724

Query: 259 IWLSRNKRIFEGKDEDWSCVFESSKLLASRW 351
           +W  RN RIFE K  +   +++S   LAS W
Sbjct: 725 VWWERNARIFEDKVRNSEYLWDSIVFLASLW 755



 Score = 37.4 bits (85), Expect(2) = 8e-06
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +3

Query: 3   QKRMPFIYVSPHCCHLCLKEGESADHI 83
           Q R P+  +SP  C LC+K GESADHI
Sbjct: 639 QVRRPYKALSPDICILCMKHGESADHI 665


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