BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00041715
         (289 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                55   1e-05

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = +2

Query: 41  KRLLPVPPQSISAIPPTSSSCTQNKKYIKV-IDECSFCKQKIHWKDQCPQLLNKIQ 205
           K +L     S+ A+P    S  QNK Y +V  DECSFCKQK HWK QCP+L  + Q
Sbjct: 211 KGILSASNPSVLAVPSKPFSNHQNKPYTRVGFDECSFCKQKGHWKAQCPKLRQQNQ 266