BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00041550
         (262 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]    77   2e-12
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...    67   3e-09
ref|XP_007201781.1| hypothetical protein PRUPE_ppa001132mg [Prun...    66   6e-09
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    65   1e-08
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_006850196.1| hypothetical protein AMTR_s00022p00248730 [A...    64   2e-08
dbj|BAD08027.1| putative pentatricopeptide (PPR) repeat-containi...    60   4e-07
ref|NP_001045762.2| Os02g0127600 [Oryza sativa Japonica Group] g...    60   4e-07
gb|EEC72399.1| hypothetical protein OsI_05688 [Oryza sativa Indi...    60   4e-07
ref|XP_006648271.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
gb|EMT06801.1| hypothetical protein F775_20393 [Aegilops tauschii]     59   7e-07
gb|EXB93154.1| hypothetical protein L484_024492 [Morus notabilis]      58   1e-06
ref|XP_006342394.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_004243929.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_004291546.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
dbj|BAK07990.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   3e-06
gb|AFW69966.1| hypothetical protein ZEAMMB73_723641 [Zea mays] g...    56   5e-06
ref|XP_003573904.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_006441414.1| hypothetical protein CICLE_v10024609mg [Citr...    55   8e-06

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Vitis vinifera]
          Length = 881

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 34/68 (50%), Positives = 49/68 (72%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           + ++ + + F+ +L K +K  RK+ NT++VG CK NK  IALEIL+E+ EKG+ PSLECY
Sbjct: 646 NERISDALNFFSDLQKRRKVGRKLCNTMVVGLCKANKVDIALEILKEIREKGVTPSLECY 705

Query: 239 EGLVRAFC 262
           E LV+  C
Sbjct: 706 EELVKVLC 713


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 34/68 (50%), Positives = 49/68 (72%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           + ++ + + F+ +L K +K  RK+ NT++VG CK NK  IALEIL+E+ EKG+ PSLECY
Sbjct: 646 NERISDALNFFSDLQKRRKVGRKLCNTMVVGLCKANKVDIALEILKEIREKGVTPSLECY 705

Query: 239 EGLVRAFC 262
           E LV+  C
Sbjct: 706 EELVKVLC 713


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 28/68 (41%), Positives = 44/68 (64%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S ++ + + F+D + + +K  RK+YNT++VG CKVNK   AL    E+   G++PS+ECY
Sbjct: 660 SERISDALNFFDAVGQRRKIGRKLYNTMVVGLCKVNKVDSALSFFLEMQSNGMVPSVECY 719

Query: 239 EGLVRAFC 262
           E L+   C
Sbjct: 720 EVLIMLLC 727


>ref|XP_007201781.1| hypothetical protein PRUPE_ppa001132mg [Prunus persica]
           gi|462397181|gb|EMJ02980.1| hypothetical protein
           PRUPE_ppa001132mg [Prunus persica]
          Length = 899

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 27/68 (39%), Positives = 50/68 (73%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S ++ + + F+++L + ++  R++Y+T+IVG CKV +  IAL+ L+E+ EKG++PS +CY
Sbjct: 665 SERISDALNFFNDLHQRREMGRRLYSTMIVGLCKVKRVDIALDFLKEMREKGVVPSDDCY 724

Query: 239 EGLVRAFC 262
           E L++  C
Sbjct: 725 EFLIQLSC 732


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 43/68 (63%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S ++ + +IF   LS+ +   RK+ N V+VG CK NK  +A +  + + +KG +PS+ECY
Sbjct: 646 SERISDALIFLSNLSQTRTIGRKISNVVVVGLCKANKTNLAFDFWKHLRDKGTVPSIECY 705

Query: 239 EGLVRAFC 262
           E L + FC
Sbjct: 706 EELAKHFC 713


>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Cucumis sativus]
          Length = 913

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 43/68 (63%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S ++ + +IF   LS+ +   RK+ N V+VG CK NK  +A +  + + +KG +PS+ECY
Sbjct: 670 SERISDALIFLSNLSQTRTIGRKISNVVVVGLCKANKTNLAFDFWKHLRDKGTVPSIECY 729

Query: 239 EGLVRAFC 262
           E L + FC
Sbjct: 730 EELAKHFC 737


>ref|XP_006850196.1| hypothetical protein AMTR_s00022p00248730 [Amborella trichopoda]
           gi|548853794|gb|ERN11777.1| hypothetical protein
           AMTR_s00022p00248730 [Amborella trichopoda]
          Length = 897

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/68 (42%), Positives = 44/68 (64%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S+++   +  + EL +  +PS K+YN +IVG C+ +K  +AL + R+  E+GLIPSL CY
Sbjct: 648 SKRIVTALNSFRELCECLEPSTKLYNVIIVGLCRADKTELALALWRDARERGLIPSLTCY 707

Query: 239 EGLVRAFC 262
           E LV   C
Sbjct: 708 EELVHMLC 715


>dbj|BAD08027.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 903

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S+++ + + F++ +   K P  K+YN  I G C+  KP  A+   RE  EKGL+PS+ CY
Sbjct: 645 SKRIGDALNFFNFIRDKKTPGTKLYNVFISGLCEAQKPEQAMVFWREAREKGLVPSISCY 704

Query: 239 EGLVRAFC 262
           E LV   C
Sbjct: 705 EQLVLLLC 712


>ref|NP_001045762.2| Os02g0127600 [Oryza sativa Japonica Group]
           gi|255670569|dbj|BAF07676.2| Os02g0127600 [Oryza sativa
           Japonica Group]
          Length = 886

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S+++ + + F++ +   K P  K+YN  I G C+  KP  A+   RE  EKGL+PS+ CY
Sbjct: 645 SKRIGDALNFFNFIRDKKTPGTKLYNVFISGLCEAQKPEQAMVFWREAREKGLVPSISCY 704

Query: 239 EGLVRAFC 262
           E LV   C
Sbjct: 705 EQLVLLLC 712


>gb|EEC72399.1| hypothetical protein OsI_05688 [Oryza sativa Indica Group]
          Length = 831

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S+++ + + F++ +   K P  K+YN  I G C+  KP  A+   RE  EKGL+PS+ CY
Sbjct: 573 SKRIGDALNFFNFIRDKKTPGTKLYNVFISGLCEAQKPEQAMVFWREAREKGLVPSISCY 632

Query: 239 EGLVRAFC 262
           E LV   C
Sbjct: 633 EQLVLLLC 640


>ref|XP_006648271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like, partial [Oryza brachyantha]
          Length = 784

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S+++ + + F++ +   K P  K+YN  I G C+  KP  A+   RE  EKGL+PS+ CY
Sbjct: 522 SKRIGDALNFFNFIRDKKAPRTKLYNVFISGLCEARKPEQAMVFWREAREKGLVPSISCY 581

Query: 239 EGLVRAFC 262
           E LV   C
Sbjct: 582 EQLVLLLC 589


>gb|EMT06801.1| hypothetical protein F775_20393 [Aegilops tauschii]
          Length = 809

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S+++ + + F++ + + K P  K+YN  I G C+  KP  A+   RE  +KGLIPS++CY
Sbjct: 547 SKRIGDALTFFNFIHEKKPPGTKMYNVFISGLCEARKPEQAMVFWREARDKGLIPSIDCY 606

Query: 239 EGLV 250
           E LV
Sbjct: 607 EQLV 610


>gb|EXB93154.1| hypothetical protein L484_024492 [Morus notabilis]
          Length = 901

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/68 (35%), Positives = 41/68 (60%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S K+ + + F++ L   +   RK+ N ++ G C+ N+  IALE  ++    G+IPS+ECY
Sbjct: 667 SDKILDAVNFFNSLRGRRNFGRKLCNAMVTGLCRANRLDIALEFFKDAKNNGVIPSIECY 726

Query: 239 EGLVRAFC 262
           E L++  C
Sbjct: 727 ELLIKLLC 734


>ref|XP_006342394.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like isoform X1 [Solanum tuberosum]
           gi|565350891|ref|XP_006342395.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71210-like isoform X2 [Solanum tuberosum]
          Length = 895

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = +2

Query: 65  KLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECYEG 244
           K+ + + ++ +LS  +   RK++N ++VG CK NKPG A  +  E+    L PS+ECYE 
Sbjct: 663 KIADALNYFRDLSNRRGLGRKLWNNMVVGLCKANKPGNAWNMFWEMRSTHLRPSMECYEE 722

Query: 245 LVRAFC 262
           LV+  C
Sbjct: 723 LVKLLC 728


>ref|XP_004243929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Solanum lycopersicum]
          Length = 896

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = +2

Query: 65  KLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECYEG 244
           K+ + + ++ +LS  +   RK++N ++VG CK NKPG A  +  E+    L PS+ECYE 
Sbjct: 664 KIADALNYFCDLSNRRGLGRKLWNNMVVGLCKANKPGNAWNMFWEMRSTHLRPSMECYEE 723

Query: 245 LVRAFC 262
           LV+  C
Sbjct: 724 LVKLLC 729


>ref|XP_004291546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/66 (34%), Positives = 43/66 (65%)
 Frame = +2

Query: 65  KLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECYEG 244
           K  + + ++++L + +   R++Y+ +I+G  K  KP  AL +L E+ EKG++PS  CYE 
Sbjct: 398 KYSDALNYFNDLRQRRNLGRRLYSLMIMGMSKARKPDFALALLEEMREKGIVPSNNCYEF 457

Query: 245 LVRAFC 262
           L+++ C
Sbjct: 458 LIQSLC 463


>dbj|BAK07990.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 912

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/64 (40%), Positives = 40/64 (62%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S+++ + + F++ + + K P  K+YN  I G C+  KP  A+   RE  +KGLIPS+ CY
Sbjct: 650 SKRIGDALHFFNCIHEKKPPGTKMYNVFISGLCEARKPEQAMVFWREARDKGLIPSISCY 709

Query: 239 EGLV 250
           E LV
Sbjct: 710 EQLV 713


>gb|AFW69966.1| hypothetical protein ZEAMMB73_723641 [Zea mays]
           gi|413935416|gb|AFW69967.1| hypothetical protein
           ZEAMMB73_723641 [Zea mays] gi|413935417|gb|AFW69968.1|
           hypothetical protein ZEAMMB73_723641 [Zea mays]
          Length = 913

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/68 (36%), Positives = 39/68 (57%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S+ L   + F++ + + K P  ++YN  I G C+V KP  A+   RE  + G+IPS+ CY
Sbjct: 650 SKNLGGALNFFNLVRRKKTPCARLYNVFISGLCEVRKPEQAMMFFREARDNGIIPSMYCY 709

Query: 239 EGLVRAFC 262
           E L+   C
Sbjct: 710 ENLLLLLC 717


>ref|XP_003573904.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like isoform 1 [Brachypodium distachyon]
           gi|357146190|ref|XP_003573905.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71210-like isoform 2 [Brachypodium distachyon]
          Length = 905

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/64 (40%), Positives = 40/64 (62%)
 Frame = +2

Query: 59  SRKLYNTIIFYDELSKHKKPSRKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECY 238
           S+++ + + F++ + + K P  K+YN  I G C+  KP  A+   RE  +KGLIPS+ CY
Sbjct: 642 SKRIGDALNFFNCIHEKKAPRSKMYNLFISGLCEARKPEQAMVFWREARDKGLIPSITCY 701

Query: 239 EGLV 250
           E LV
Sbjct: 702 EELV 705


>ref|XP_006441414.1| hypothetical protein CICLE_v10024609mg [Citrus clementina]
           gi|557543676|gb|ESR54654.1| hypothetical protein
           CICLE_v10024609mg [Citrus clementina]
          Length = 862

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/47 (48%), Positives = 32/47 (68%)
 Frame = +2

Query: 122 RKVYNTVIVGHCKVNKPGIALEILREVSEKGLIPSLECYEGLVRAFC 262
           RK+YNT+IVG CK  K  +A   +RE+   G+ PS+ECYE L++  C
Sbjct: 662 RKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLC 708