BLASTX nr result

ID: Cocculus23_contig00040918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00040918
         (334 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310774.2| hypothetical protein POPTR_0007s12170g [Popu...    58   1e-06
ref|XP_002306443.2| hypothetical protein POPTR_0005s13780g [Popu...    56   5e-06
ref|XP_002522396.1| bel1 homeotic protein, putative [Ricinus com...    55   8e-06

>ref|XP_002310774.2| hypothetical protein POPTR_0007s12170g [Populus trichocarpa]
           gi|566180906|ref|XP_006380743.1| hypothetical protein
           POPTR_0007s12170g [Populus trichocarpa]
           gi|550334712|gb|EEE91224.2| hypothetical protein
           POPTR_0007s12170g [Populus trichocarpa]
           gi|550334713|gb|ERP58540.1| hypothetical protein
           POPTR_0007s12170g [Populus trichocarpa]
          Length = 824

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = -3

Query: 332 STLVNFRTTTTGDVSLTLGLRHAGNLQPEKNRFSVVRDFGDC 207
           STL+ F TTT GDVSLTLGLRHAGN+ PEK+    +RDFG C
Sbjct: 784 STLIRFGTTTAGDVSLTLGLRHAGNM-PEKSPTFSMRDFGGC 824


>ref|XP_002306443.2| hypothetical protein POPTR_0005s13780g [Populus trichocarpa]
           gi|550338869|gb|EEE93439.2| hypothetical protein
           POPTR_0005s13780g [Populus trichocarpa]
          Length = 825

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = -3

Query: 332 STLVNFRTTTTGDVSLTLGLRHAGNLQPEKNRFSVVRDFGDC 207
           STL+ F T+T GDVSLTLGLRHAGN+ P+K+    VRDFG C
Sbjct: 785 STLIRFGTSTAGDVSLTLGLRHAGNV-PDKSPTFSVRDFGGC 825


>ref|XP_002522396.1| bel1 homeotic protein, putative [Ricinus communis]
           gi|223538474|gb|EEF40080.1| bel1 homeotic protein,
           putative [Ricinus communis]
          Length = 562

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 4/46 (8%)
 Frame = -3

Query: 332 STLVNFRTTTT--GDVSLTLGLRHAGNLQPEKNRFSV--VRDFGDC 207
           STL+ F TTT   GDVSLTLGLRHAGN+ PEKN  S   VRDFG+C
Sbjct: 518 STLIRFGTTTAAAGDVSLTLGLRHAGNM-PEKNTASAFSVRDFGNC 562


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