BLASTX nr result
ID: Cocculus23_contig00040843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00040843
(889 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006826399.1| hypothetical protein AMTR_s00004p00149230 [A... 169 1e-39
ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, part... 65 3e-08
ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containi... 63 2e-07
ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfam... 61 5e-07
gb|EYU20150.1| hypothetical protein MIMGU_mgv1a002588mg [Mimulus... 61 7e-07
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu... 60 9e-07
emb|CBI39452.3| unnamed protein product [Vitis vinifera] 59 2e-06
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-06
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi... 59 3e-06
tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea m... 59 3e-06
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 57 7e-06
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi... 57 7e-06
>ref|XP_006826399.1| hypothetical protein AMTR_s00004p00149230 [Amborella trichopoda]
gi|548830713|gb|ERM93636.1| hypothetical protein
AMTR_s00004p00149230 [Amborella trichopoda]
Length = 648
Score = 169 bits (428), Expect = 1e-39
Identities = 91/223 (40%), Positives = 134/223 (60%)
Frame = -3
Query: 680 LSSPGSLSVWNRRFMSSMRDYQDEEKHRTVHVNILVRSIVFIVQKTDKWDXXXXXXXXXX 501
+ +P +S N RF+ + +K R V VN+LVRS+ I+Q TD+W+
Sbjct: 1 MGNPRFISTGNPRFIPTSTT-TGTKKSRPVSVNLLVRSMASIIQNTDQWNTSLNILCDTS 59
Query: 500 XSEITPPIAVQVLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAILKVLTKDSVLSHASM 321
S +TP IAVQVLKRI+KP++A+ FF++L+ N F+HDSL YSA++KVLTK LS+ +
Sbjct: 60 SSNLTPSIAVQVLKRIRKPNIAYGFFEYLDRKNDFNHDSLTYSAMIKVLTKKPNLSNTLL 119
Query: 320 ADDLLRKKIDLGLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKSRGFAPSSASFNVLIG 141
A +LL KKI+L ++ +DF+FVL WV+V GF P ++ N ++
Sbjct: 120 AQNLLHKKIELRFEMFAADFDFVLSSWVQVKKVNEASKLLAQMVDHGFIPGISTCNEVLN 179
Query: 140 ALFKSKKKNLGWELFHQMLNVNTNTLDGQTFNIVMKFSCVEGR 12
LF K+ + G ELF+QML LD Q+FNI+M+ C +G+
Sbjct: 180 LLFSYKRSDSGRELFYQMLEGKIGELDTQSFNIIMREYCKDGK 222
>ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
gi|462415618|gb|EMJ20355.1| hypothetical protein
PRUPE_ppa016282mg, partial [Prunus persica]
Length = 721
Score = 65.5 bits (158), Expect = 3e-08
Identities = 46/181 (25%), Positives = 81/181 (44%)
Frame = -3
Query: 545 TDKWDXXXXXXXXXXXSEITPPIAVQVLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAI 366
T+ W S ++ Q L IK P A +FFKW+E GF H+ Y +
Sbjct: 58 TNTWSSELESSLSTISSSLSKTTVHQTLHLIKTPHKALQFFKWVEVM-GFSHNDQSYFLM 116
Query: 365 LKVLTKDSVLSHASMADDLLRKKIDLGLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKS 186
L++L + L+ A + K+ + + + F +++ + R KS
Sbjct: 117 LEILGRARNLNAARNLLFSIEKRSNGAVKLEDRFFNSLIRNYGRAGLFQESIKLFTTMKS 176
Query: 185 RGFAPSSASFNVLIGALFKSKKKNLGWELFHQMLNVNTNTLDGQTFNIVMKFSCVEGRTE 6
G +PS SFN L+ L K + N+ ++ +ML++ T D TFNI+++ C+ +
Sbjct: 177 LGVSPSVVSFNSLLSILLKKGRTNMAKNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMVD 236
Query: 5 D 3
+
Sbjct: 237 E 237
>ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cicer arietinum]
Length = 740
Score = 62.8 bits (151), Expect = 2e-07
Identities = 41/157 (26%), Positives = 76/157 (48%)
Frame = -3
Query: 473 VQVLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAILKVLTKDSVLSHASMADDLLRKKI 294
+Q L+ IK P AF FF W+ NGF H+S Y +L++L ++ L+ A + K+
Sbjct: 93 LQTLRHIKFPSKAFHFFNWVH-ENGFSHNSQSYFIMLEILGREKNLNVARNFLFSIEKRS 151
Query: 293 DLGLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKSRGFAPSSASFNVLIGALFKSKKKN 114
+ + + F +++ + KS G +PS +FN ++ L + + N
Sbjct: 152 NGEVKLEDRFFNSLIRSYGEAGLFKESIKLFQTMKSIGVSPSVITFNSVLLILLRRGRTN 211
Query: 113 LGWELFHQMLNVNTNTLDGQTFNIVMKFSCVEGRTED 3
+ E+F +ML+ T D T+NI+++ C ++
Sbjct: 212 MAKEVFDEMLSTYGVTPDTYTYNILIRGFCKNSMVDE 248
>ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508704486|gb|EOX96382.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 724
Score = 61.2 bits (147), Expect = 5e-07
Identities = 47/208 (22%), Positives = 91/208 (43%)
Frame = -3
Query: 626 RDYQDEEKHRTVHVNILVRSIVFIVQKTDKWDXXXXXXXXXXXSEITPPIAVQVLKRIKK 447
R + D+ K T +S+ ++ T W ++ +Q L+ IK
Sbjct: 46 RGWDDKAKSSTKTKR--AKSMARVINSTP-WSSELESSLSSLSPSLSKTTVLQTLRLIKA 102
Query: 446 PDLAFEFFKWLEGSNGFDHDSLCYSAILKVLTKDSVLSHASMADDLLRKKIDLGLDVMPS 267
P A +FF W++ GF H++ + IL++L K+ L+ A + K+ + + +
Sbjct: 103 PSKALQFFDWVQ-KMGFPHNAQSFFLILEILGKERNLNAARNLLLSIEKRSNGSVKLEDQ 161
Query: 266 DFEFVLQQWVRVXXXXXXXXXXXXXKSRGFAPSSASFNVLIGALFKSKKKNLGWELFHQM 87
F +++ + + K G +PS SFN L+ L K + N+ +F +M
Sbjct: 162 FFNSLIRSYGKAGLFQESIKVFETMKGIGVSPSVVSFNNLLMILLKRGRTNMAKSVFDEM 221
Query: 86 LNVNTNTLDGQTFNIVMKFSCVEGRTED 3
L+ + D TFNI+++ C+ ++
Sbjct: 222 LSTYGVSPDVYTFNILIRGFCMNSMVDE 249
>gb|EYU20150.1| hypothetical protein MIMGU_mgv1a002588mg [Mimulus guttatus]
Length = 656
Score = 60.8 bits (146), Expect = 7e-07
Identities = 40/156 (25%), Positives = 73/156 (46%)
Frame = -3
Query: 470 QVLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAILKVLTKDSVLSHASMADDLLRKKID 291
Q L+RIK P A FF W + S+GF H+ Y +L++L + L+ A + KK +
Sbjct: 38 QTLRRIKTPSNALRFFNWAQ-SSGFTHNHHSYFIMLQILGRARHLNPARNFLFSIPKKSN 96
Query: 290 LGLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKSRGFAPSSASFNVLIGALFKSKKKNL 111
+ + F +++ + KS +PS+ +FN L L K + +
Sbjct: 97 NTVPLTDKFFNSLIRSYGDAGLYQESLKIFQVMKSMAVSPSTVTFNSLFSILLKRGRMGM 156
Query: 110 GWELFHQMLNVNTNTLDGQTFNIVMKFSCVEGRTED 3
+EL+++ML D TFN++++ C+ ++
Sbjct: 157 VFELYNEMLKTYGAKPDSYTFNVLIRGLCMNSSVDE 192
>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
gi|550323558|gb|ERP53036.1| hypothetical protein
POPTR_0014s05550g [Populus trichocarpa]
Length = 728
Score = 60.5 bits (145), Expect = 9e-07
Identities = 43/156 (27%), Positives = 70/156 (44%)
Frame = -3
Query: 470 QVLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAILKVLTKDSVLSHASMADDLLRKKID 291
QVL+ I P AFEFF W NGF HDS Y +L +L ++ L+ A + ++ +
Sbjct: 96 QVLRFIASPPKAFEFFNWAS-RNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSN 154
Query: 290 LGLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKSRGFAPSSASFNVLIGALFKSKKKNL 111
+ + +L+ + KS G +PS +FN L+ L K + N+
Sbjct: 155 GSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNM 214
Query: 110 GWELFHQMLNVNTNTLDGQTFNIVMKFSCVEGRTED 3
+F +M T D TFNI+++ C ++
Sbjct: 215 AHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDE 250
>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 59.3 bits (142), Expect = 2e-06
Identities = 40/181 (22%), Positives = 79/181 (43%)
Frame = -3
Query: 545 TDKWDXXXXXXXXXXXSEITPPIAVQVLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAI 366
T+ W ++ +Q L+ I+ P A FF+W+E + GF H+ Y +
Sbjct: 75 TEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVE-AKGFTHNEQSYFLM 133
Query: 365 LKVLTKDSVLSHASMADDLLRKKIDLGLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKS 186
+++L + L+ A + KK + + F +++ + K
Sbjct: 134 IEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKE 193
Query: 185 RGFAPSSASFNVLIGALFKSKKKNLGWELFHQMLNVNTNTLDGQTFNIVMKFSCVEGRTE 6
G +PS +FN L+ + K + ++ +LF +ML+ T D TFNI+++ C+ +
Sbjct: 194 IGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVD 253
Query: 5 D 3
+
Sbjct: 254 E 254
>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 59.3 bits (142), Expect = 2e-06
Identities = 40/181 (22%), Positives = 79/181 (43%)
Frame = -3
Query: 545 TDKWDXXXXXXXXXXXSEITPPIAVQVLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAI 366
T+ W ++ +Q L+ I+ P A FF+W+E + GF H+ Y +
Sbjct: 75 TEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVE-AKGFTHNEQSYFLM 133
Query: 365 LKVLTKDSVLSHASMADDLLRKKIDLGLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKS 186
+++L + L+ A + KK + + F +++ + K
Sbjct: 134 IEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKE 193
Query: 185 RGFAPSSASFNVLIGALFKSKKKNLGWELFHQMLNVNTNTLDGQTFNIVMKFSCVEGRTE 6
G +PS +FN L+ + K + ++ +LF +ML+ T D TFNI+++ C+ +
Sbjct: 194 IGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVD 253
Query: 5 D 3
+
Sbjct: 254 E 254
>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1128
Score = 58.9 bits (141), Expect = 3e-06
Identities = 42/156 (26%), Positives = 73/156 (46%)
Frame = -3
Query: 470 QVLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAILKVLTKDSVLSHASMADDLLRKKID 291
Q L+RIK P A +FF W+E S GF H S Y IL++L ++ L+ A + K+ +
Sbjct: 85 QTLRRIKTPSQAIKFFNWVE-SLGFSHTSHSYFTILELLGRNRNLNAARNFLFSIEKRSN 143
Query: 290 LGLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKSRGFAPSSASFNVLIGALFKSKKKNL 111
+ + F +++ + KS G + S SFN L L K + ++
Sbjct: 144 GKVKLEDKFFNSLIRSYGAAGLFQEAVNVFKTMKSMGISASVFSFNSLFSVLLKRGRTSM 203
Query: 110 GWELFHQMLNVNTNTLDGQTFNIVMKFSCVEGRTED 3
++ +ML + D TFNI+++ C+ ++
Sbjct: 204 VRNVYDEMLGMYGVEPDTHTFNILIRGFCMSSMVDE 239
>tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein
ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 58.9 bits (141), Expect = 3e-06
Identities = 41/159 (25%), Positives = 72/159 (45%)
Frame = -3
Query: 479 IAVQVLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAILKVLTKDSVLSHASMADDLLRK 300
+ V VL+ ++ P+L FF W E G+ H CY+A+ +VL D A + LLR+
Sbjct: 106 VVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFD---DRARTTERLLRE 162
Query: 299 KIDLGLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKSRGFAPSSASFNVLIGALFKSKK 120
+ +V+ ++++ R K G+ PS A++N L+ L + +
Sbjct: 163 IGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQ 222
Query: 119 KNLGWELFHQMLNVNTNTLDGQTFNIVMKFSCVEGRTED 3
++G+ + +M + T D T + C EGR D
Sbjct: 223 MDMGFRVQKEMSELGFCT-DKFTVGCFAQALCKEGRWSD 260
>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 57.4 bits (137), Expect = 7e-06
Identities = 44/215 (20%), Positives = 91/215 (42%)
Frame = -3
Query: 647 RRFMSSMRDYQDEEKHRTVHVNILVRSIVFIVQKTDKWDXXXXXXXXXXXSEITPPIAVQ 468
R + S + + + + +TV ++ I + W ++ +Q
Sbjct: 30 RCYSSRLTETKTKSSTKTVKATVMAEMI-----NSKPWSSDLESSLASLSPSLSQTTVLQ 84
Query: 467 VLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAILKVLTKDSVLSHASMADDLLRKKIDL 288
L ++ A +FF W + G+ H Y ++L++L ++ L+ A + K+
Sbjct: 85 TLGFLRDTSKALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRG 143
Query: 287 GLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKSRGFAPSSASFNVLIGALFKSKKKNLG 108
+ + F +++ + R KS G +PS +FN L+ L K + N+
Sbjct: 144 IVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMA 203
Query: 107 WELFHQMLNVNTNTLDGQTFNIVMKFSCVEGRTED 3
+++ +ML+ T D TFNI+++ C+ G +D
Sbjct: 204 KKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDD 238
>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 57.4 bits (137), Expect = 7e-06
Identities = 44/215 (20%), Positives = 91/215 (42%)
Frame = -3
Query: 647 RRFMSSMRDYQDEEKHRTVHVNILVRSIVFIVQKTDKWDXXXXXXXXXXXSEITPPIAVQ 468
R + S + + + + +TV ++ I + W ++ +Q
Sbjct: 30 RCYSSRLTETKTKSSTKTVKATVMAEMI-----NSKPWSSDLESSLASLSPSLSQTTVLQ 84
Query: 467 VLKRIKKPDLAFEFFKWLEGSNGFDHDSLCYSAILKVLTKDSVLSHASMADDLLRKKIDL 288
L ++ A +FF W + G+ H Y ++L++L ++ L+ A + K+
Sbjct: 85 TLGFLRDTSKALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRG 143
Query: 287 GLDVMPSDFEFVLQQWVRVXXXXXXXXXXXXXKSRGFAPSSASFNVLIGALFKSKKKNLG 108
+ + F +++ + R KS G +PS +FN L+ L K + N+
Sbjct: 144 IVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMA 203
Query: 107 WELFHQMLNVNTNTLDGQTFNIVMKFSCVEGRTED 3
+++ +ML+ T D TFNI+++ C+ G +D
Sbjct: 204 KKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDD 238