BLASTX nr result
ID: Cocculus23_contig00040665
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00040665
(241 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
emb|CBI28421.3| unnamed protein product [Vitis vinifera] 114 1e-23
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera] 114 1e-23
ref|XP_004243553.1| PREDICTED: pentatricopeptide repeat-containi... 102 4e-20
ref|XP_006363010.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_002531694.1| pentatricopeptide repeat-containing protein,... 97 2e-18
ref|XP_006856878.1| hypothetical protein AMTR_s00055p00197790 [A... 96 4e-18
ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citr... 93 4e-17
ref|XP_004295353.1| PREDICTED: pentatricopeptide repeat-containi... 92 6e-17
ref|XP_007049304.1| Pentatricopeptide repeat-containing protein,... 91 2e-16
ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|EPS74565.1| hypothetical protein M569_00187, partial [Genlise... 83 3e-14
ref|XP_006492780.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_006492779.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_006838717.1| hypothetical protein AMTR_s00002p00251730 [A... 62 6e-08
ref|XP_006442168.1| hypothetical protein CICLE_v10018770mg [Citr... 62 1e-07
ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera] 57 3e-06
>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 114 bits (286), Expect = 1e-23
Identities = 49/78 (62%), Positives = 64/78 (82%)
Frame = -3
Query: 236 ILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRN 57
I+ +HKD E+ +QFFYW+S+RPFYKH+++CF ++LNRLVRD+V ADH+RILMIKACRN
Sbjct: 81 IVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRN 140
Query: 56 KEEITMVLGYLNEIGKKG 3
+EEI V +LNEI G
Sbjct: 141 EEEIRRVADFLNEISGMG 158
>emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 114 bits (286), Expect = 1e-23
Identities = 49/78 (62%), Positives = 64/78 (82%)
Frame = -3
Query: 236 ILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRN 57
I+ +HKD E+ +QFFYW+S+RPFYKH+++CF ++LNRLVRD+V ADH+RILMIKACRN
Sbjct: 81 IVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRN 140
Query: 56 KEEITMVLGYLNEIGKKG 3
+EEI V +LNEI G
Sbjct: 141 EEEIRRVADFLNEISGMG 158
>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 114 bits (286), Expect = 1e-23
Identities = 49/78 (62%), Positives = 64/78 (82%)
Frame = -3
Query: 236 ILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRN 57
I+ +HKD E+ +QFFYW+S+RPFYKH+++CF ++LNRLVRD+V ADH+RILMIKACRN
Sbjct: 123 IVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRN 182
Query: 56 KEEITMVLGYLNEIGKKG 3
+EEI V +LNEI G
Sbjct: 183 EEEIRRVADFLNEISGMG 200
>ref|XP_004243553.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Solanum lycopersicum]
Length = 815
Score = 102 bits (255), Expect = 4e-20
Identities = 45/79 (56%), Positives = 62/79 (78%)
Frame = -3
Query: 239 RILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACR 60
+I+EIH++ E +QFFYWVS+R FYKH +C+ ++LNRLV D+ ADHVRILMIK CR
Sbjct: 91 KIVEIHENTEVALQFFYWVSKRHFYKHDRNCYVSMLNRLVFDKKFAPADHVRILMIKGCR 150
Query: 59 NKEEITMVLGYLNEIGKKG 3
N+EE+ V+ YL+E+ +KG
Sbjct: 151 NQEEMKWVIEYLSELSRKG 169
>ref|XP_006363010.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like isoform X1 [Solanum tuberosum]
gi|565394734|ref|XP_006363011.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X2 [Solanum tuberosum]
gi|565394736|ref|XP_006363012.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X3 [Solanum tuberosum]
Length = 913
Score = 102 bits (253), Expect = 7e-20
Identities = 44/79 (55%), Positives = 62/79 (78%)
Frame = -3
Query: 239 RILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACR 60
+++EIH++ E +QFFYWVS+R FYKH +C+ ++LNRLV D+ ADHV+ILMIK CR
Sbjct: 91 KLVEIHENTEVALQFFYWVSKRHFYKHDRNCYVSMLNRLVFDKKFTPADHVKILMIKGCR 150
Query: 59 NKEEITMVLGYLNEIGKKG 3
N+EEI V+ YL+E+ +KG
Sbjct: 151 NQEEIKWVIEYLSELSRKG 169
>ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 97.4 bits (241), Expect = 2e-18
Identities = 41/77 (53%), Positives = 60/77 (77%)
Frame = -3
Query: 236 ILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRN 57
IL+ HK+ ++ ++FF+W+SRR F+KH + CF ++LNRLVRD++ ADHVRILMIK+CRN
Sbjct: 84 ILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRN 143
Query: 56 KEEITMVLGYLNEIGKK 6
+ E+ V +L+EI K
Sbjct: 144 EGEVKRVTQFLSEINSK 160
>ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 97.4 bits (241), Expect = 2e-18
Identities = 41/77 (53%), Positives = 60/77 (77%)
Frame = -3
Query: 236 ILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRN 57
IL+ HK+ ++ ++FF+W+SRR F+KH + CF ++LNRLVRD++ ADHVRILMIK+CRN
Sbjct: 84 ILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRN 143
Query: 56 KEEITMVLGYLNEIGKK 6
+ E+ V +L+EI K
Sbjct: 144 EGEVKRVTQFLSEINSK 160
>ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528670|gb|EEF30685.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 821
Score = 97.1 bits (240), Expect = 2e-18
Identities = 41/75 (54%), Positives = 59/75 (78%)
Frame = -3
Query: 239 RILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACR 60
+I+ H + +T +QFFYW+S+R FYKH + CF ++LNRLV+D++L ADHVRILMIKACR
Sbjct: 76 KIINTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACR 135
Query: 59 NKEEITMVLGYLNEI 15
N++E+ V +L+ I
Sbjct: 136 NEDELKRVTDFLHGI 150
>ref|XP_006856878.1| hypothetical protein AMTR_s00055p00197790 [Amborella trichopoda]
gi|548860812|gb|ERN18345.1| hypothetical protein
AMTR_s00055p00197790 [Amborella trichopoda]
Length = 940
Score = 96.3 bits (238), Expect = 4e-18
Identities = 41/78 (52%), Positives = 61/78 (78%)
Frame = -3
Query: 236 ILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRN 57
+L +HKD ++ +QFFYW+S+RP Y+HSLD FF LL L+R+Q+LK A+ ++ILMIKAC +
Sbjct: 112 VLSLHKDAKSALQFFYWISQRPGYQHSLDTFFVLLKSLLREQLLKQAEKIQILMIKACSD 171
Query: 56 KEEITMVLGYLNEIGKKG 3
+ EI V+ +LNE+ +G
Sbjct: 172 EAEILKVIEFLNELRSRG 189
>ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citrus clementina]
gi|568830449|ref|XP_006469511.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like [Citrus sinensis]
gi|557550366|gb|ESR60995.1| hypothetical protein
CICLE_v10014182mg [Citrus clementina]
Length = 929
Score = 92.8 bits (229), Expect = 4e-17
Identities = 40/74 (54%), Positives = 55/74 (74%)
Frame = -3
Query: 236 ILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRN 57
I+ H++ + +QFFYW+S+R FYKH + CF ++LNRLV D+ ADHVRILMIKACRN
Sbjct: 80 IINTHQNTDVVLQFFYWISKRRFYKHDMGCFVSMLNRLVHDRNFDPADHVRILMIKACRN 139
Query: 56 KEEITMVLGYLNEI 15
+EE+ V +L E+
Sbjct: 140 EEELKRVFEFLIEL 153
>ref|XP_004295353.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Fragaria vesca subsp. vesca]
Length = 927
Score = 92.4 bits (228), Expect = 6e-17
Identities = 37/79 (46%), Positives = 62/79 (78%)
Frame = -3
Query: 239 RILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACR 60
+I++ H++ ++ ++FF+WVSRR YKH ++CF ++L+RLVR+++ ADHVR+L++K CR
Sbjct: 82 KIIQTHRNTDSALRFFFWVSRRKPYKHDMNCFVSMLDRLVREKLFGPADHVRLLLVKGCR 141
Query: 59 NKEEITMVLGYLNEIGKKG 3
N+EE+ V+ YLNE + G
Sbjct: 142 NEEELKWVVEYLNEKKRNG 160
>ref|XP_007049304.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|508701565|gb|EOX93461.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 909
Score = 90.5 bits (223), Expect = 2e-16
Identities = 37/73 (50%), Positives = 55/73 (75%)
Frame = -3
Query: 239 RILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACR 60
+I+ HK+ ++ ++FF+WVS+R FYKH + C+ +LNRL +D+ DHVRILMIKACR
Sbjct: 69 QIITTHKNTDSVLEFFFWVSKRHFYKHDMGCYVLMLNRLAKDRKFPPVDHVRILMIKACR 128
Query: 59 NKEEITMVLGYLN 21
N+EE+ V+ +LN
Sbjct: 129 NEEEVKRVIEFLN 141
>ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/74 (51%), Positives = 57/74 (77%)
Frame = -3
Query: 236 ILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRN 57
+L+ H + E+ ++FF+WVSR F+KH + CF ++LNRLVRD++ AD+VRILMIK+CRN
Sbjct: 84 LLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRN 143
Query: 56 KEEITMVLGYLNEI 15
+ E+ V+ L+EI
Sbjct: 144 EGEVKRVIQVLSEI 157
>gb|EPS74565.1| hypothetical protein M569_00187, partial [Genlisea aurea]
Length = 860
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = -3
Query: 236 ILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRN 57
ILE H++L++ +QFFYW+S+ FYKH + C+ +LNRLV + ADHVRILMIK+C +
Sbjct: 41 ILETHENLDSALQFFYWLSKLNFYKHDMSCYIYMLNRLVAGKKFSSADHVRILMIKSCED 100
Query: 56 KEEITMVLGYLNEIGK 9
++ V+ +LN I K
Sbjct: 101 GGQMRAVVDHLNGICK 116
>ref|XP_006492780.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like isoform X2 [Citrus sinensis]
Length = 910
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/70 (35%), Positives = 46/70 (65%)
Frame = -3
Query: 212 ETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRNKEEITMVL 33
+T + F YW+S++P +KHS++ + +LLN L+R+ K ++ + LM+K+C +EI VL
Sbjct: 90 QTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVL 149
Query: 32 GYLNEIGKKG 3
+L + + G
Sbjct: 150 DFLRRVNESG 159
>ref|XP_006492779.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like isoform X1 [Citrus sinensis]
Length = 922
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/70 (35%), Positives = 46/70 (65%)
Frame = -3
Query: 212 ETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRNKEEITMVL 33
+T + F YW+S++P +KHS++ + +LLN L+R+ K ++ + LM+K+C +EI VL
Sbjct: 90 QTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVL 149
Query: 32 GYLNEIGKKG 3
+L + + G
Sbjct: 150 DFLRRVNESG 159
>ref|XP_006838717.1| hypothetical protein AMTR_s00002p00251730 [Amborella trichopoda]
gi|548841223|gb|ERN01286.1| hypothetical protein
AMTR_s00002p00251730 [Amborella trichopoda]
Length = 904
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = -3
Query: 239 RILEIHKDLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACR 60
++LE+ D + + FF+W+ + P YKH+L + A+L+RL+ + A+ +RI MIK+C
Sbjct: 79 KVLELILDTKIALNFFFWMGQVPGYKHNLQSYVAILDRLIHAGSMGMAEKIRITMIKSCE 138
Query: 59 NKEEITMVLGYLNEIGKK 6
+ ++I V+ +IG K
Sbjct: 139 SIDDIEFVIDTFRKIGDK 156
>ref|XP_006442168.1| hypothetical protein CICLE_v10018770mg [Citrus clementina]
gi|557544430|gb|ESR55408.1| hypothetical protein
CICLE_v10018770mg [Citrus clementina]
Length = 910
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/70 (35%), Positives = 45/70 (64%)
Frame = -3
Query: 212 ETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRNKEEITMVL 33
+T + F YW+S++P +KHS++ + +LLN L+R+ K ++ + LM+K+C +EI VL
Sbjct: 90 QTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVL 149
Query: 32 GYLNEIGKKG 3
+L + G
Sbjct: 150 DFLRRVNDSG 159
>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
protein product [Vitis vinifera]
Length = 890
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/72 (34%), Positives = 46/72 (63%)
Frame = -3
Query: 218 DLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRNKEEITM 39
D +T + FF W++ RP +KH++ + ++LN L+R ++L A+ +RI MIK+C + E++
Sbjct: 80 DPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLF 139
Query: 38 VLGYLNEIGKKG 3
VL ++ G
Sbjct: 140 VLEVFRKMNADG 151
>emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/72 (34%), Positives = 46/72 (63%)
Frame = -3
Query: 218 DLETTVQFFYWVSRRPFYKHSLDCFFALLNRLVRDQVLKHADHVRILMIKACRNKEEITM 39
D +T + FF W++ RP +KH++ + ++LN L+R ++L A+ +RI MIK+C + E++
Sbjct: 80 DPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLF 139
Query: 38 VLGYLNEIGKKG 3
VL ++ G
Sbjct: 140 VLEVFRKMNADG 151