BLASTX nr result
ID: Cocculus23_contig00040574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00040574
(387 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 105 9e-21
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 97 3e-18
emb|CAN60100.1| hypothetical protein VITISV_021668 [Vitis vinifera] 91 2e-16
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera] 80 2e-13
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 79 5e-13
emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera] 78 1e-12
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 75 1e-11
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 73 4e-11
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 73 5e-11
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera] 72 8e-11
gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group] 72 8e-11
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 70 2e-10
emb|CAN66823.1| hypothetical protein VITISV_003499 [Vitis vinifera] 69 5e-10
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 69 5e-10
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 69 5e-10
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 69 7e-10
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo... 69 9e-10
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G... 69 9e-10
gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subc... 68 1e-09
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 64 2e-08
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 105 bits (261), Expect = 9e-21
Identities = 53/127 (41%), Positives = 70/127 (55%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQLCG++GHV +C +RFD F P + T E+ D
Sbjct: 310 CQLCGKIGHVVAQCYYRFDHTFQVPQ---NLSSRNSSPRAYYSFSPQVNGVIPTSEVFSD 366
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
NWYPDSGA+ HVT + NLM ++ + Q QVHVGNG GL + +G S F SPF S+ L+
Sbjct: 367 DNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSPFSSKPLL 426
Query: 366 FNNLLHL 386
N+LLH+
Sbjct: 427 LNHLLHV 433
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 96.7 bits (239), Expect = 3e-18
Identities = 56/135 (41%), Positives = 74/135 (54%), Gaps = 8/135 (5%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATP----- 170
CQLCGR+GHV +C +RFD +F GPS G F TP
Sbjct: 286 CQLCGRIGHVVMQCYYRFDQSFTGPSQLQGNRPQGNMAHLHQQLSEXF--FPGTPSVKPT 343
Query: 171 --ELVCDSNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSP 344
E++ D+NWYPDSGAT H+T ++NNL+ S+ +V VGNG+GL +G +SF S
Sbjct: 344 TAEIIQDNNWYPDSGATHHLTPNLNNLLTKSQFPSSDEVFVGNGKGLPIHHIGHTSFSSS 403
Query: 345 F-QSRQLVFNNLLHL 386
F S+ L LLH+
Sbjct: 404 FIPSKTLALKQLLHV 418
>emb|CAN60100.1| hypothetical protein VITISV_021668 [Vitis vinifera]
Length = 411
Score = 90.9 bits (224), Expect = 2e-16
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Frame = +3
Query: 12 LCGRLGHVAHKC*FRFDSNFHGP-SAAFGXXXXXXXXXXXXXXXXXXXAFLAT-PELVCD 185
+C ++GH A++C +R+D +F P + F L T PE +CD
Sbjct: 182 VCMKIGHSANRCYYRYDPSFQSPRTLGFTPSFQKSPQTQXQGGNKPNMQVLXTIPENICD 241
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+NWYPDS A+ HVT++ NNL+ H+ QV VGNG G+ + +G S F PF S+
Sbjct: 242 TNWYPDSSASNHVTTNANNLVEHTPYYGNEQVRVGNGMGIFIKYIGLSQFSXPFTSQLFS 301
Query: 366 FNNLLHL 386
N LLH+
Sbjct: 302 LNXLLHV 308
>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
Length = 1079
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAA--FGXXXXXXXXXXXXXXXXXXXAFLATPELV 179
CQ+C ++GH A +C +R+D +F GP +ATPE +
Sbjct: 282 CQVCMKIGHSADRCYYRYDPSFQGPHTPGFTPSFQKSPQTQIQGGNKPNMQVLMATPENI 341
Query: 180 CDSNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQ 299
CD+NWYPDSGA+ HVT++ NNL+ H+ QV VGN Q
Sbjct: 342 CDTNWYPDSGASNHVTTNANNLVEHTPYYGNEQVRVGNDQ 381
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 79.3 bits (194), Expect = 5e-13
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 23/150 (15%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAA----------------------FGXXXXXXXX 119
CQLC + GH H+C +R+D NFHG A G
Sbjct: 183 CQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGNVNLTEYD 242
Query: 120 XXXXXXXXXXXAFLATPELVCDSNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQ 299
A +ATPE + + W+PDSGAT HVT D+ NL + ++ + ++H+GNG
Sbjct: 243 AQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGT 302
Query: 300 GLCFQCVGSSSFCSPFQSRQLVF-NNLLHL 386
GL +G S F S +++F N+L +
Sbjct: 303 GLKISHIGLSVFPSSSSPNKVLFLKNILRV 332
>emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera]
Length = 410
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/78 (48%), Positives = 50/78 (64%)
Frame = +3
Query: 153 AFLATPELVCDSNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSS 332
A ATP++V D+NWYP+SGA+ HVT D NLM ++ QVH+GNG L + VG S
Sbjct: 209 AMFATPKVVNDTNWYPNSGASNHVTFDATNLMTKAEYYGSDQVHIGNGMDLSIKHVGQSI 268
Query: 333 FCSPFQSRQLVFNNLLHL 386
F SP+ S+ L LLH+
Sbjct: 269 FSSPYTSKILSLKQLLHV 286
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 74.7 bits (182), Expect = 1e-11
Identities = 47/127 (37%), Positives = 66/127 (51%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQ+C ++GHVA +C RFD+ F P A+ A +A P L+ +
Sbjct: 314 CQICCKIGHVATECWHRFDNQFQ-PKASHSNQFSSSAQDPQ--------ALMAAPGLLGE 364
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+ W+ D+GAT HVTSD+ NL H+ S +V VGNG+GL G SS P L+
Sbjct: 365 TPWFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSI--PTSQGALL 422
Query: 366 FNNLLHL 386
N+LH+
Sbjct: 423 LKNVLHV 429
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 73.2 bits (178), Expect = 4e-11
Identities = 41/127 (32%), Positives = 61/127 (48%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQLCG++GHV C +R+D NF S A D
Sbjct: 1242 CQLCGKIGHVVADCWYRYDENFIPDSKT-----------------------AAAASYGVD 1278
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+NWY D+GAT H+T +++ L H K + + Q+H +G G+ + VG S +P + QL
Sbjct: 1279 TNWYMDTGATDHITGELDKLTTHEKYNGKEQIHTASGAGMDIKHVGHSIIHTPICNIQL- 1337
Query: 366 FNNLLHL 386
N+LH+
Sbjct: 1338 -KNILHV 1343
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 72.8 bits (177), Expect = 5e-11
Identities = 43/127 (33%), Positives = 61/127 (48%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQ+CG+ GH+A C RFD + A +ATP V D
Sbjct: 256 CQVCGKYGHIAINCYHRFDQTYQ------------------PTMNNHLAAMVATPSTVGD 297
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+WY D+GAT H+T ++N L +H+ + +V VGNG L +G S+ S SR L
Sbjct: 298 ESWYMDTGATHHLTPNLNKLNSHTPFAGSDKVMVGNGNRLNISNIGHSTISS--VSRSLN 355
Query: 366 FNNLLHL 386
N+LH+
Sbjct: 356 LKNILHV 362
>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
Length = 1211
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +3
Query: 159 LATPELVCDSNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFC 338
+ T E+ D NWYP+SGA+ HVT + N+M ++ + Q QVHVGNG GL + +G F
Sbjct: 301 IPTSEVFGDDNWYPNSGASNHVTPNPANMMKSAEFARQNQVHVGNGIGLSIKHIGQFEFL 360
Query: 339 SPFQSRQLVFNNLLHL 386
S F S+ L+ N+LL++
Sbjct: 361 SHFSSKPLLLNHLLYV 376
>gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 760
Score = 72.0 bits (175), Expect = 8e-11
Identities = 43/127 (33%), Positives = 60/127 (47%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQLCG+LGH KC RFD++F G A A AT D
Sbjct: 201 CQLCGKLGHTVIKCYKRFDTSFTGEEKA---------------------ANTATTSYGID 239
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+NWY D+GAT H+T +++ L K + QVH NG G+ + ++ P S LV
Sbjct: 240 TNWYVDTGATDHITGELDKLTVRDKYTGNEQVHAANGTGMEISHIDHATV--PISSGNLV 297
Query: 366 FNNLLHL 386
N+L++
Sbjct: 298 LKNVLYV 304
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/117 (35%), Positives = 59/117 (50%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQLCG++GH HKC RFD++F G + A +A D
Sbjct: 194 CQLCGKIGHTVHKCWKRFDASFTGEDKS---------------------ANVAASSYEVD 232
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSR 356
+NWY DSGAT H+TS+++ L K + QVH +G G+ Q GS++ S ++R
Sbjct: 233 TNWYIDSGATDHITSELDKLTVKDKYAGNDQVHTASGSGVA-QIGGSATGSSAAETR 288
>emb|CAN66823.1| hypothetical protein VITISV_003499 [Vitis vinifera]
Length = 763
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAA--FGXXXXXXXXXXXXXXXXXXXAFLATPELV 179
CQLC ++GH +C +++D +F GP +AT E +
Sbjct: 156 CQLCMKIGHSVDRCYYKYDPSFQGPRTLGFTPSFQRSPQTQVQGGNKPNMQVLMATLENI 215
Query: 180 CDSNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQ 299
CD+NWYPDSGA+ HVT++ NNL+ H+ QV GN Q
Sbjct: 216 CDTNWYPDSGASXHVTANANNLVEHTXYYGNEQVR-GNDQ 254
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/127 (30%), Positives = 56/127 (44%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQLCG+ GH H C RFD +F G F + A D
Sbjct: 260 CQLCGKEGHTVHTCWKRFDRSFSGNDVIF------------QQHHQQAKSASAVSSYGVD 307
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+NWY D+ AT H+T ++ L + QVH N G+ +G + F +P +R L
Sbjct: 308 TNWYLDTAATDHITGELKKLTTKERYHGNEQVHAANSAGMSISHIGRTIFHTP--NRNLA 365
Query: 366 FNNLLHL 386
NN+L++
Sbjct: 366 LNNVLYI 372
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/127 (30%), Positives = 56/127 (44%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQLCG+ GH H C RFD +F G F + A D
Sbjct: 260 CQLCGKEGHTVHTCWKRFDRSFSGNDVIF------------QQHHQQAKSASAVSSYGVD 307
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+NWY D+ AT H+T ++ L + QVH N G+ +G + F +P +R L
Sbjct: 308 TNWYLDTAATDHITGELKKLTTKERYHGNEQVHAANSAGMSISHIGRTIFHTP--NRNLA 365
Query: 366 FNNLLHL 386
NN+L++
Sbjct: 366 LNNVLYI 372
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 68.9 bits (167), Expect = 7e-10
Identities = 36/127 (28%), Positives = 58/127 (45%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
C LCG+ GHV C +R+D NF A D
Sbjct: 277 CHLCGKTGHVVADCWYRYDENF-----------------------VPENKIAAAASYGVD 313
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+NWY D+GAT H+T +++ L K + + Q++ +G G+ + +G S C+P +R +
Sbjct: 314 TNWYVDTGATDHITGELDKLTTREKYNGKDQIYTASGAGMDIKHIGHSVICTP--TRNIY 371
Query: 366 FNNLLHL 386
N+LH+
Sbjct: 372 LKNILHV 378
>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 68.6 bits (166), Expect = 9e-10
Identities = 42/127 (33%), Positives = 60/127 (47%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQLC +LGH KC RFD++F G + A AT
Sbjct: 154 CQLCDKLGHTVVKCYKRFDASFTGEEKS---------------------AAAATSSYGVG 192
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+NWY D+GAT H+TSD++ L K + QVH +G G+ +G S + Q R L+
Sbjct: 193 TNWYIDTGATDHITSDLDKLTVREKYNGGDQVHTASGSGMKINQIGQSIVRT--QHRDLI 250
Query: 366 FNNLLHL 386
N+L++
Sbjct: 251 LKNILYV 257
>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 572
Score = 68.6 bits (166), Expect = 9e-10
Identities = 42/127 (33%), Positives = 60/127 (47%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQLC +LGH KC RFD++F G + A AT
Sbjct: 227 CQLCDKLGHTVVKCYKRFDASFTGEEKS---------------------AAAATSSYGVG 265
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+NWY D+GAT H+TSD++ L K + QVH +G G+ +G S + Q R L+
Sbjct: 266 TNWYIDTGATDHITSDLDKLTVREKYNGGDQVHTASGSGMKINQIGQSIVRT--QHRDLI 323
Query: 366 FNNLLHL 386
N+L++
Sbjct: 324 LKNILYV 330
>gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 358
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/127 (31%), Positives = 59/127 (46%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQLCG++GH KC RFD+++ G + AT D
Sbjct: 223 CQLCGKIGHTVVKCWKRFDTSYSGEEKSVAA---------------------ATNSYGVD 261
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+NWY D+GAT H+T ++ L K + QVH +G G+ VG + +P R +V
Sbjct: 262 TNWYIDTGATDHITGELEKLTVRDKYTGGDQVHTASGTGMGIDHVGRTVIRTPV--RDVV 319
Query: 366 FNNLLHL 386
N+LH+
Sbjct: 320 LRNVLHV 326
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 63.9 bits (154), Expect = 2e-08
Identities = 39/127 (30%), Positives = 57/127 (44%)
Frame = +3
Query: 6 CQLCGRLGHVAHKC*FRFDSNFHGPSAAFGXXXXXXXXXXXXXXXXXXXAFLATPELVCD 185
CQ+C + GHVA KC RFD N+ A A D
Sbjct: 248 CQVCYKRGHVAAKCWHRFDENY--------------------VPDERHVAAAAQAAYAVD 287
Query: 186 SNWYPDSGATAHVTSDVNNLMNHSK*SHQVQVHVGNGQGLCFQCVGSSSFCSPFQSRQLV 365
+NWY DSGAT H+TS+++ L K ++H NG G+ + +G + +P + L
Sbjct: 288 TNWYIDSGATDHITSELDKLTVREKYKGTEKIHTANGVGMQIKHIGHALVHTP-DNHTLH 346
Query: 366 FNNLLHL 386
N+LH+
Sbjct: 347 LKNVLHV 353