BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00040563
         (346 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK07074.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   1e-06
ref|XP_003601928.1| tRNA (cytosine-5-)-methyltransferase NSUN2 [...    56   6e-06

>dbj|BAK07074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 690

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +2

Query: 251 CVVCAAPGSKTFQLLEMIHQSTESGLLPAGMV 346
           C VCAAPGSKTFQLLEMIHQST+ G+LP  MV
Sbjct: 2   CAVCAAPGSKTFQLLEMIHQSTKPGVLPTAMV 33


>ref|XP_003601928.1| tRNA (cytosine-5-)-methyltransferase NSUN2 [Medicago truncatula]
           gi|355490976|gb|AES72179.1| tRNA
           (cytosine-5-)-methyltransferase NSUN2 [Medicago
           truncatula]
          Length = 844

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +2

Query: 119 SLKVFHY*KNLERAFELLTPSVSLMTLANVLDKIHS-HV*LFLGFCVVCAAPGSKTFQLL 295
           SLK FH    LE     +T   ++  +  +   +HS HV L +     CAAPGSKTFQLL
Sbjct: 139 SLKRFHEFLKLENEIGNITRQEAVSMVPPLFLDVHSNHVVLDM-----CAAPGSKTFQLL 193

Query: 296 EMIHQSTESGLLPAGMV 346
           E++H+ST++G LP GMV
Sbjct: 194 EILHRSTKAGSLPDGMV 210