BLASTX nr result
ID: Cocculus23_contig00040562
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00040562
(303 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004295339.1| PREDICTED: pentatricopeptide repeat-containi... 99 5e-19
ref|XP_007213091.1| hypothetical protein PRUPE_ppa025418mg, part... 96 4e-18
emb|CBI16742.3| unnamed protein product [Vitis vinifera] 94 3e-17
ref|XP_006343679.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_004242982.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_002520828.1| pentatricopeptide repeat-containing protein,... 89 8e-16
gb|EYU22278.1| hypothetical protein MIMGU_mgv1a025105mg, partial... 85 9e-15
ref|XP_003534752.2| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
ref|XP_007026433.1| Tetratricopeptide repeat-like superfamily pr... 81 1e-13
ref|XP_007147563.1| hypothetical protein PHAVU_006G135000g [Phas... 81 2e-13
ref|XP_004486555.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_006449972.1| hypothetical protein CICLE_v10017604mg, part... 75 1e-11
ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group] g... 74 3e-11
gb|EAY96283.1| hypothetical protein OsI_18181 [Oryza sativa Indi... 74 3e-11
gb|ADE76509.1| unknown [Picea sitchensis] 73 4e-11
ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
emb|CBI32698.3| unnamed protein product [Vitis vinifera] 72 6e-11
ref|XP_006654913.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ... 72 1e-10
ref|XP_004493071.1| PREDICTED: putative pentatricopeptide repeat... 71 2e-10
>ref|XP_004295339.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Fragaria vesca subsp. vesca]
Length = 653
Score = 99.4 bits (246), Expect = 5e-19
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
+YAA GKWD+FA +RK+MKERKV+KVPGFSQI VK + HVF+A D+ HP+ EI +L+E
Sbjct: 572 IYAARGKWDEFARVRKKMKERKVNKVPGFSQIQVKGRSHVFYARDRSHPQAAEIWGLLQE 631
Query: 181 KLLPHM 198
KLLPHM
Sbjct: 632 KLLPHM 637
>ref|XP_007213091.1| hypothetical protein PRUPE_ppa025418mg, partial [Prunus persica]
gi|462408956|gb|EMJ14290.1| hypothetical protein
PRUPE_ppa025418mg, partial [Prunus persica]
Length = 610
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/66 (63%), Positives = 54/66 (81%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
VYAA GKW++FA +RK+MKER+V KVPGFSQI VK + H+FFAGD+ HP+ EI +L+E
Sbjct: 524 VYAAHGKWEEFAQVRKKMKERRVKKVPGFSQIEVKGRSHIFFAGDRSHPQAAEIYGLLQE 583
Query: 181 KLLPHM 198
KLLP +
Sbjct: 584 KLLPQI 589
>emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
V+AA G WD+FA +RK+MK+R V KVPGFSQI VK K H FFAGDK HP+++EI +L E
Sbjct: 593 VFAARGNWDEFAEVRKKMKDRNVRKVPGFSQIEVKGKCHAFFAGDKSHPQVEEIYELLRE 652
Query: 181 KLLPHM 198
KLLP M
Sbjct: 653 KLLPIM 658
>ref|XP_006343679.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Solanum tuberosum]
Length = 589
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +1
Query: 4 YAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEEK 183
YAA G+W DFA +RK+MKERKV KVPGFS+I V K H+FF GDK HPE +EI ++++E
Sbjct: 520 YAASGRWGDFAQVRKKMKERKVKKVPGFSEIEVNGKNHIFFVGDKSHPEKEEIYTLIKEN 579
Query: 184 LLPHM 198
LLP M
Sbjct: 580 LLPLM 584
>ref|XP_004242982.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Solanum lycopersicum]
Length = 589
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +1
Query: 4 YAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEEK 183
YAA G+W DFA +RK+MKERKV KVPGFS+I V K H+FF GDK HPE +EI ++++E
Sbjct: 520 YAASGRWGDFAQVRKKMKERKVKKVPGFSEIEVNGKNHIFFVGDKSHPEKEEIYTLIKEN 579
Query: 184 LLPHM 198
LLP M
Sbjct: 580 LLPLM 584
>ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539959|gb|EEF41537.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 656
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/65 (64%), Positives = 49/65 (75%)
Frame = +1
Query: 4 YAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEEK 183
YAA GKW++FA +RK MKER V K PGFSQI VK K HVFF D+ HP+L+EI L+EK
Sbjct: 576 YAACGKWNEFAEVRKEMKERNVKKEPGFSQIEVKGKSHVFFVRDRSHPQLEEIYLFLDEK 635
Query: 184 LLPHM 198
LLP M
Sbjct: 636 LLPLM 640
>gb|EYU22278.1| hypothetical protein MIMGU_mgv1a025105mg, partial [Mimulus
guttatus]
Length = 648
Score = 85.1 bits (209), Expect = 9e-15
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = +1
Query: 4 YAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEEK 183
YAA GKWD F+ +RK+MK+R V K+PG SQI V K HVF A D+ HPE++E+ +L EK
Sbjct: 573 YAASGKWDKFSELRKKMKDRDVKKLPGLSQIDVNGKSHVFLARDRSHPEMEEMYKLLHEK 632
Query: 184 LLPHM 198
LLP M
Sbjct: 633 LLPQM 637
>ref|XP_003534752.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 672
Score = 81.3 bits (199), Expect = 1e-13
Identities = 33/65 (50%), Positives = 49/65 (75%)
Frame = +1
Query: 4 YAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEEK 183
YAA G+WD+FA +RKRM+ER V ++PG+SQI + K HVF G++ HP+++EI +L++
Sbjct: 593 YAAEGQWDEFAKVRKRMRERNVKRIPGYSQIQITGKNHVFVVGERSHPQIEEIYRLLQQN 652
Query: 184 LLPHM 198
L P M
Sbjct: 653 LQPLM 657
>ref|XP_007026433.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508781799|gb|EOY29055.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 655
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
VYAA KW++FA +RK MKERKV KV GFS + VK K HVFF GD+ HP+++E+ ML
Sbjct: 575 VYAAQEKWNEFARVRKMMKERKVKKVAGFSYVEVKGKNHVFFVGDRCHPQVEEMYEMLRV 634
Query: 181 KLLPHMIG 204
L P G
Sbjct: 635 MLPPRTSG 642
>ref|XP_007147563.1| hypothetical protein PHAVU_006G135000g [Phaseolus vulgaris]
gi|561020786|gb|ESW19557.1| hypothetical protein
PHAVU_006G135000g [Phaseolus vulgaris]
Length = 657
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/65 (52%), Positives = 49/65 (75%)
Frame = +1
Query: 4 YAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEEK 183
YAA G+W +FA +RKRMKER + K+PG+SQI +K K HVF G++ HP+++EI +L++
Sbjct: 579 YAAEGQWGEFAKVRKRMKERYLKKIPGYSQIQIKGKNHVFVVGERSHPQIEEIDRLLQQN 638
Query: 184 LLPHM 198
L P M
Sbjct: 639 LQPLM 643
>ref|XP_004486555.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Cicer arietinum]
Length = 626
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = +1
Query: 4 YAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEEK 183
YAA G+W +FA +RKRM+ER V K+PGFSQI V K H FF G++ HP+++EI +L
Sbjct: 548 YAAEGQWVEFAQVRKRMRERNVKKIPGFSQIQVNWKNHTFFVGERSHPQVEEIYRLLNLN 607
Query: 184 LLPHM 198
L P M
Sbjct: 608 LQPLM 612
>ref|XP_006449972.1| hypothetical protein CICLE_v10017604mg, partial [Citrus clementina]
gi|557552583|gb|ESR63212.1| hypothetical protein
CICLE_v10017604mg, partial [Citrus clementina]
Length = 384
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/66 (56%), Positives = 47/66 (71%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
V+AA G+WD+FA +RK+M ER+ KV FSQI VK K HVFF GD+ HP++ EI +L E
Sbjct: 308 VHAARGEWDEFAQVRKKM-ERRGKKVASFSQIEVKGKDHVFFVGDRSHPKVSEIYGLLRE 366
Query: 181 KLLPHM 198
LL M
Sbjct: 367 TLLAPM 372
>ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group]
gi|45680436|gb|AAS75237.1| unknown protein [Oryza sativa
Japonica Group] gi|113578003|dbj|BAF16366.1|
Os05g0112900 [Oryza sativa Japonica Group]
gi|215715346|dbj|BAG95097.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215736909|dbj|BAG95838.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222629956|gb|EEE62088.1| hypothetical protein
OsJ_16872 [Oryza sativa Japonica Group]
Length = 661
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/76 (46%), Positives = 49/76 (64%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
V+A+GG W++ AS+ K MK KV K PGFSQI V + HVF++ D++H + EI ML
Sbjct: 585 VFASGGMWNEVASVWKIMKGSKVKKTPGFSQIEVNARNHVFYSRDQMHSQRTEIYEMLNS 644
Query: 181 KLLPHMIGGCSV*KSF 228
+L+P M G S+ F
Sbjct: 645 RLVPQMKGSSSLGTDF 660
>gb|EAY96283.1| hypothetical protein OsI_18181 [Oryza sativa Indica Group]
Length = 661
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/76 (46%), Positives = 49/76 (64%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
V+A+GG W++ AS+ K MK KV K PGFSQI V + HVF++ D++H + EI ML
Sbjct: 585 VFASGGMWNEVASVWKIMKGSKVKKTPGFSQIEVNARNHVFYSRDQMHSQRTEIYEMLNS 644
Query: 181 KLLPHMIGGCSV*KSF 228
+L+P M G S+ F
Sbjct: 645 RLVPQMKGSSSLGTDF 660
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 73.2 bits (178), Expect = 4e-11
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
+YAA G+WDD A +RK MK+R V K PG S I VKNK H F DK HP+ +EI S LEE
Sbjct: 86 IYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYSTLEE 145
>ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
+YA+ G W+D A +R MK+R V KVPG S I VK++ HVFF D LHPE +I +MLEE
Sbjct: 681 IYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEE 740
Query: 181 KLLPHMIGG 207
LL + G
Sbjct: 741 LLLQMLDAG 749
>emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
+YA+ G W+D A +R MK+R V KVPG S I VK++ HVFF D LHPE +I +MLEE
Sbjct: 419 IYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEE 478
Query: 181 KLLPHMIGG 207
LL + G
Sbjct: 479 LLLQMLDAG 487
>ref|XP_006654913.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Oryza brachyantha]
Length = 664
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
V+A+GG W+D AS+ K +K KV K PGFSQI V + HVF++ D++H + EI ML
Sbjct: 580 VFASGGMWNDMASVWKIIKASKVKKTPGFSQIEVNARNHVFYSRDQMHSQCTEIYEMLNC 639
Query: 181 KLLPHMIGGCSV 216
L+P M G S+
Sbjct: 640 SLVPQMKGSSSL 651
>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
+YAA G+WD+ ++K M+ER V KVP +S + +K+K HVF A DK HP+++EI L+E
Sbjct: 714 IYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDE 773
>ref|XP_004493071.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cicer arietinum]
Length = 812
Score = 70.9 bits (172), Expect = 2e-10
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = +1
Query: 1 VYAAGGKWDDFASIRKRMKERKVSKVPGFSQIVVKNKRHVFFAGDKLHPELKEICSMLEE 180
+YAA G+WD+ ++K M+ER V KVP +S + +K+K HVF A DK HP+++EI L+E
Sbjct: 652 IYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFAANDKSHPQMREIMRKLDE 711