BLASTX nr result
ID: Cocculus23_contig00039651
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00039651
(1049 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat... 537 e-150
ref|XP_007207055.1| hypothetical protein PRUPE_ppb002198mg [Prun... 507 e-141
ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat... 503 e-140
ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat... 500 e-139
ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat... 499 e-138
ref|XP_007010336.1| Pentatricopeptide repeat (PPR) superfamily p... 496 e-138
gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis] 476 e-132
ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citr... 476 e-132
ref|XP_002323645.2| pentatricopeptide repeat-containing family p... 471 e-130
ref|XP_002526706.1| pentatricopeptide repeat-containing protein,... 467 e-129
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat... 455 e-125
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat... 455 e-125
ref|XP_003539649.2| PREDICTED: putative pentatricopeptide repeat... 451 e-124
ref|XP_007133846.1| hypothetical protein PHAVU_011G213900g [Phas... 441 e-121
gb|EPS63455.1| hypothetical protein M569_11327 [Genlisea aurea] 432 e-119
ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t... 431 e-118
ref|XP_004487107.1| PREDICTED: putative pentatricopeptide repeat... 426 e-116
ref|XP_006418524.1| hypothetical protein EUTSA_v10002816mg [Eutr... 409 e-111
ref|NP_187494.1| pentatricopeptide repeat-containing protein [Ar... 401 e-109
ref|XP_002884698.1| pentatricopeptide repeat-containing protein ... 392 e-106
>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 537 bits (1384), Expect = e-150
Identities = 258/348 (74%), Positives = 301/348 (86%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
Y LMR EG PNNFTFPFVLKACARL D+QLGV+IHT VVK GF+ DVFVKTSL+CLYAK
Sbjct: 100 YGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAK 159
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CG+LEDAH++FD+IP++NVVSWTAIISGYI G+F EA+DMF RL+++ L PDSFT+VRV
Sbjct: 160 CGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRV 219
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
LSAC+QLGD GE IH+ + E GM RNVFV TSLVDMY+K G+MEKARSVFD MPEKD+
Sbjct: 220 LSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDI 279
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V+W AMI GYA NGLPKEA++LF QMQRE VKPDC+T+V VLSAC+RLG LE+G+ VS L
Sbjct: 280 VSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGL 339
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
V++NEFL NPVLGTALID+YAKCGSM +AWE+FKGMKE+D VVWNA+ISGLAMNG+V+ +
Sbjct: 340 VDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKIS 399
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
FGLF Q+EKLG PDGNTFIGLLC C HAGLVDEGR YF+SM +SL
Sbjct: 400 FGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSL 447
Score = 212 bits (540), Expect = 2e-52
Identities = 114/305 (37%), Positives = 182/305 (59%), Gaps = 4/305 (1%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGF-LEDAHR---LFDEIPERNVVSWTAIISGYI 271
+H H+++ G D + LL + +C F D + LF +I + N+ W +I G +
Sbjct: 33 LHAHLLRFGLCHDNY----LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLV 88
Query: 272 EFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVF 451
F +A++ + + P++FT VL AC++L D + G IH V + G +VF
Sbjct: 89 SNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVF 148
Query: 452 VATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREK 631
V TSLV +Y+K G +E A VFD++P+K+VV+W+A+I GY G +EA+++F ++
Sbjct: 149 VKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMN 208
Query: 632 VKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAW 811
+ PD FT+V VLSAC++LG L G+ + + + + + N +GT+L+DMYAKCG+M +A
Sbjct: 209 LAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKAR 268
Query: 812 ELFKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAG 991
+F GM E+D+V W A+I G A+NG + A LF QM++ PD T +G+L AC G
Sbjct: 269 SVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLG 328
Query: 992 LVDEG 1006
++ G
Sbjct: 329 ALELG 333
>ref|XP_007207055.1| hypothetical protein PRUPE_ppb002198mg [Prunus persica]
gi|462402697|gb|EMJ08254.1| hypothetical protein
PRUPE_ppb002198mg [Prunus persica]
Length = 636
Score = 507 bits (1305), Expect = e-141
Identities = 240/345 (69%), Positives = 289/345 (83%)
Frame = +2
Query: 11 MRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGF 190
MR EG+ PN+FTFPFVLKACAR SD LG+ IHT VVK GF DV+VKTSLLCLYAKCG+
Sbjct: 53 MRTEGILPNSFTFPFVLKACARRSDFPLGLNIHTLVVKTGFNFDVYVKTSLLCLYAKCGY 112
Query: 191 LEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSA 370
LE AH++FD+IP++NVVSWTAII GYI G++ EA+D F RL+++ L+PDSF+LVRVLSA
Sbjct: 113 LEHAHKVFDDIPDKNVVSWTAIICGYIGAGQYREAIDTFRRLLEMGLRPDSFSLVRVLSA 172
Query: 371 CSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTW 550
C +LGD GE I RY+ E GMG+NVFVATSLVD+Y+K G MEKAR +FD M EKD+V+W
Sbjct: 173 CGKLGDLSSGEWIDRYITEIGMGKNVFVATSLVDLYAKCGQMEKARGIFDGMLEKDIVSW 232
Query: 551 SAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEK 730
S+MI GYASNGLPKEA++LFFQMQ+E +KPDC+ MV VLSAC+RLG LE+G+ L++K
Sbjct: 233 SSMIQGYASNGLPKEAIDLFFQMQKENLKPDCYAMVGVLSACARLGALELGEWAGSLMDK 292
Query: 731 NEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGL 910
+EF +NPVLGTALIDMYAKCG M+QAWE+FKGMK+RD VVWNA +SGLAMNGHV+ FGL
Sbjct: 293 HEFFVNPVLGTALIDMYAKCGCMIQAWEVFKGMKKRDHVVWNAAMSGLAMNGHVKTVFGL 352
Query: 911 FAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
F Q+EK G PDGNTF+GLLC C HAGLVDEGR YF++M +SL
Sbjct: 353 FGQVEKNGIRPDGNTFMGLLCGCSHAGLVDEGRRYFNNMTSVFSL 397
Score = 198 bits (503), Expect = 4e-48
Identities = 100/266 (37%), Positives = 161/266 (60%)
Frame = +2
Query: 209 LFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGD 388
+FD+ + N+ W +I G + F +A++ F+ + + P+SFT VL AC++ D
Sbjct: 18 VFDQTTQPNIFLWNTMIRGLVSDDCFDDAIEFFISMRTEGILPNSFTFPFVLKACARRSD 77
Query: 389 QEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGG 568
G +IH V + G +V+V TSL+ +Y+K G +E A VFD++P+K+VV+W+A+I G
Sbjct: 78 FPLGLNIHTLVVKTGFNFDVYVKTSLLCLYAKCGYLEHAHKVFDDIPDKNVVSWTAIICG 137
Query: 569 YASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLN 748
Y G +EA++ F ++ ++PD F++V VLSAC +LG L G+ + R + + N
Sbjct: 138 YIGAGQYREAIDTFRRLLEMGLRPDSFSLVRVLSACGKLGDLSSGEWIDRYITEIGMGKN 197
Query: 749 PVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEK 928
+ T+L+D+YAKCG M +A +F GM E+D+V W+++I G A NG + A LF QM+K
Sbjct: 198 VFVATSLVDLYAKCGQMEKARGIFDGMLEKDIVSWSSMIQGYASNGLPKEAIDLFFQMQK 257
Query: 929 LGTPPDGNTFIGLLCACVHAGLVDEG 1006
PD +G+L AC G ++ G
Sbjct: 258 ENLKPDCYAMVGVLSACARLGALELG 283
Score = 104 bits (259), Expect = 7e-20
Identities = 54/174 (31%), Positives = 93/174 (53%)
Frame = +2
Query: 485 FGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAV 664
FG +R VFD+ + ++ W+ MI G S+ +A+E F M+ E + P+ FT V
Sbjct: 9 FGHASYSRLVFDQTTQPNIFLWNTMIRGLVSDDCFDDAIEFFISMRTEGILPNSFTFPFV 68
Query: 665 LSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDL 844
L AC+R +G ++ LV K F + + T+L+ +YAKCG + A ++F + ++++
Sbjct: 69 LKACARRSDFPLGLNIHTLVVKTGFNFDVYVKTSLLCLYAKCGYLEHAHKVFDDIPDKNV 128
Query: 845 VVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEG 1006
V W A+I G G + A F ++ ++G PD + + +L AC G + G
Sbjct: 129 VSWTAIICGYIGAGQYREAIDTFRRLLEMGLRPDSFSLVRVLSACGKLGDLSSG 182
>ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Solanum lycopersicum]
Length = 688
Score = 503 bits (1295), Expect = e-140
Identities = 242/350 (69%), Positives = 291/350 (83%), Gaps = 1/350 (0%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
+H MR EG PNNFTFPF+LK+C RLSD +LGV+ H VVK GF+ DVFVKT L+C YA+
Sbjct: 101 FHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVKAHGLVVKGGFDYDVFVKTGLVCFYAR 160
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CGFL+DAH++FD+IPE+NVVSWTAII+GYI+FG+F EA+D+F R +++ L PDSFTLVRV
Sbjct: 161 CGFLDDAHQMFDDIPEKNVVSWTAIITGYIDFGKFKEAIDLFRRSLEMGLSPDSFTLVRV 220
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
LSACS++GD GE IH Y E G+GRNVFV T LVDMY+K G M KAR VFDEM EKDV
Sbjct: 221 LSACSRVGDVSAGEWIHGYAVEMGIGRNVFVNTGLVDMYAKCGEMAKAREVFDEMVEKDV 280
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V+WSAMI GYA NGLPKEALE+F+ MQRE V+PDC++MV VLSACSRLG LEVG+ S+L
Sbjct: 281 VSWSAMIQGYAVNGLPKEALEVFYTMQRENVRPDCYSMVGVLSACSRLGALEVGEWASKL 340
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGM-KERDLVVWNAVISGLAMNGHVQA 898
++ NEFL N VLGTALIDMYAKCG MV AWE+FK M ++D V+WNAV+SGLAM+G+V++
Sbjct: 341 MDMNEFLSNAVLGTALIDMYAKCGRMVSAWEIFKQMLVKKDRVIWNAVLSGLAMHGYVKS 400
Query: 899 AFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSLK 1048
AF F+Q+EKLG P+GNTFIGLLCAC HAGLVDEGR YF SM + YSL+
Sbjct: 401 AFCCFSQVEKLGIKPNGNTFIGLLCACTHAGLVDEGRKYFQSMTHLYSLE 450
Score = 191 bits (486), Expect = 3e-46
Identities = 105/303 (34%), Positives = 174/303 (57%), Gaps = 2/303 (0%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLED--AHRLFDEIPERNVVSWTAIISGYIEF 277
IH +++AGF+ + ++ +LL + F A +F++ E N+ + +I G +
Sbjct: 33 IHARLIRAGFDQNNYL-LNLLLKFTLNNFNNPNYAKLVFNQAQEPNIFLYNTMIRGLVSN 91
Query: 278 GRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVA 457
F ++++ F + + P++FT +L +C++L D E G H V + G +VFV
Sbjct: 92 NCFHQSIEFFHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVKAHGLVVKGGFDYDVFVK 151
Query: 458 TSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVK 637
T LV Y++ G ++ A +FD++PEK+VV+W+A+I GY G KEA++LF + +
Sbjct: 152 TGLVCFYARCGFLDDAHQMFDDIPEKNVVSWTAIITGYIDFGKFKEAIDLFRRSLEMGLS 211
Query: 638 PDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWEL 817
PD FT+V VLSACSR+G + G+ + + N + T L+DMYAKCG M +A E+
Sbjct: 212 PDSFTLVRVLSACSRVGDVSAGEWIHGYAVEMGIGRNVFVNTGLVDMYAKCGEMAKAREV 271
Query: 818 FKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLV 997
F M E+D+V W+A+I G A+NG + A +F M++ PD + +G+L AC G +
Sbjct: 272 FDEMVEKDVVSWSAMIQGYAVNGLPKEALEVFYTMQRENVRPDCYSMVGVLSACSRLGAL 331
Query: 998 DEG 1006
+ G
Sbjct: 332 EVG 334
Score = 183 bits (465), Expect = 9e-44
Identities = 108/314 (34%), Positives = 180/314 (57%), Gaps = 4/314 (1%)
Frame = +2
Query: 23 GLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDA 202
GL P++FT VL AC+R+ DV G IH + V+ G +VFV T L+ +YAKCG + A
Sbjct: 209 GLSPDSFTLVRVLSACSRVGDVSAGEWIHGYAVEMGIGRNVFVNTGLVDMYAKCGEMAKA 268
Query: 203 HRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQL 382
+FDE+ E++VVSW+A+I GY G EA+++F + ++PD +++V VLSACS+L
Sbjct: 269 REVFDEMVEKDVVSWSAMIQGYAVNGLPKEALEVFYTMQRENVRPDCYSMVGVLSACSRL 328
Query: 383 GDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEM-PEKDVVTWSAM 559
G E GE + ++ N + T+L+DMY+K G M A +F +M +KD V W+A+
Sbjct: 329 GALEVGEWASKLMDMNEFLSNAVLGTALIDMYAKCGRMVSAWEIFKQMLVKKDRVIWNAV 388
Query: 560 IGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEF 739
+ G A +G K A F Q+++ +KP+ T + +L AC+ G ++ G + + + +
Sbjct: 389 LSGLAMHGYVKSAFCCFSQVEKLGIKPNGNTFIGLLCACTHAGLVDEGRKYFQSMT-HLY 447
Query: 740 LLNPVLGT--ALIDMYAKCGSMVQAWELFKGMKER-DLVVWNAVISGLAMNGHVQAAFGL 910
L P + ++D+ + G + +A L + M + + VVW A++SG ++ + A +
Sbjct: 448 SLEPSIEHYGCMVDLLGRAGLLDEAHSLIESMPMKANAVVWGALLSGCRLHRDTKLAEHV 507
Query: 911 FAQMEKLGTPPDGN 952
Q+ +L GN
Sbjct: 508 LKQLIELEPWNSGN 521
Score = 78.6 bits (192), Expect = 4e-12
Identities = 48/192 (25%), Positives = 101/192 (52%), Gaps = 3/192 (1%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
++ M++E + P+ ++ VL AC+RL +++G + F + + T+L+ +YAK
Sbjct: 303 FYTMQRENVRPDCYSMVGVLSACSRLGALEVGEWASKLMDMNEFLSNAVLGTALIDMYAK 362
Query: 182 CGFLEDAHRLFDE-IPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVR 358
CG + A +F + + +++ V W A++SG G A F ++ + +KP+ T +
Sbjct: 363 CGRMVSAWEIFKQMLVKKDRVIWNAVLSGLAMHGYVKSAFCCFSQVEKLGIKPNGNTFIG 422
Query: 359 VLSACSQLGDQEKGESIHRYVEER-GMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEK 535
+L AC+ G ++G + + + ++ +VD+ + G +++A S+ + MP K
Sbjct: 423 LLCACTHAGLVDEGRKYFQSMTHLYSLEPSIEHYGCMVDLLGRAGLLDEAHSLIESMPMK 482
Query: 536 -DVVTWSAMIGG 568
+ V W A++ G
Sbjct: 483 ANAVVWGALLSG 494
>ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Solanum tuberosum]
Length = 687
Score = 500 bits (1287), Expect = e-139
Identities = 237/349 (67%), Positives = 288/349 (82%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
+H MR EG PNNFTFPF+LK+C RLSD +LGV+ H VVK GF+ DVFVKT L+C YA+
Sbjct: 101 FHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVKAHGLVVKGGFDYDVFVKTGLVCFYAR 160
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CGFL+DAH++FD+IPE+NVVSWTAI++GYI+FG+F EA+ +F R +++ L PDSFTLVRV
Sbjct: 161 CGFLDDAHQMFDDIPEKNVVSWTAIMTGYIDFGKFKEAIGLFRRSLEMGLSPDSFTLVRV 220
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
LSACS++GD GE IHRY E MGRNVFV T LVDMY+K G M KAR VFDEM EKDV
Sbjct: 221 LSACSRVGDVSAGEWIHRYAVEMDMGRNVFVNTGLVDMYAKCGEMAKAREVFDEMVEKDV 280
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V+WSAMI GYA NGLPKEA+E+F++MQRE V+PDC++MV VLSAC+RLG LEVG+ +L
Sbjct: 281 VSWSAMIQGYAVNGLPKEAMEVFYRMQRENVRPDCYSMVGVLSACARLGALEVGEWACKL 340
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
++ NEFL N VLGTALIDMYAKCG MV AWE+FK M +D V+WNAV+SGLAM+G+V++A
Sbjct: 341 MDMNEFLSNAVLGTALIDMYAKCGRMVSAWEIFKQMLVKDRVIWNAVVSGLAMHGYVKSA 400
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSLK 1048
F F Q+EKLG P+GNTFIGLLCAC HAGLVD+GR YF SM + YSL+
Sbjct: 401 FCCFGQVEKLGIKPNGNTFIGLLCACTHAGLVDDGRKYFQSMTHLYSLE 449
Score = 191 bits (485), Expect = 4e-46
Identities = 104/303 (34%), Positives = 174/303 (57%), Gaps = 2/303 (0%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLED--AHRLFDEIPERNVVSWTAIISGYIEF 277
IH +++ GF+ + ++ +LL + F A +F++ E N+ + +I G +
Sbjct: 33 IHARLIRTGFDQNNYL-LNLLLKFTLNNFNNPNYAKLVFNQTQEPNIFLYNTMIRGLVSN 91
Query: 278 GRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVA 457
F +++ F + + P++FT +L +C++L D E G H V + G +VFV
Sbjct: 92 NCFHQSIAYFHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVKAHGLVVKGGFDYDVFVK 151
Query: 458 TSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVK 637
T LV Y++ G ++ A +FD++PEK+VV+W+A++ GY G KEA+ LF + +
Sbjct: 152 TGLVCFYARCGFLDDAHQMFDDIPEKNVVSWTAIMTGYIDFGKFKEAIGLFRRSLEMGLS 211
Query: 638 PDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWEL 817
PD FT+V VLSACSR+G + G+ + R + + N + T L+DMYAKCG M +A E+
Sbjct: 212 PDSFTLVRVLSACSRVGDVSAGEWIHRYAVEMDMGRNVFVNTGLVDMYAKCGEMAKAREV 271
Query: 818 FKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLV 997
F M E+D+V W+A+I G A+NG + A +F +M++ PD + +G+L AC G +
Sbjct: 272 FDEMVEKDVVSWSAMIQGYAVNGLPKEAMEVFYRMQRENVRPDCYSMVGVLSACARLGAL 331
Query: 998 DEG 1006
+ G
Sbjct: 332 EVG 334
Score = 184 bits (468), Expect = 4e-44
Identities = 106/313 (33%), Positives = 179/313 (57%), Gaps = 3/313 (0%)
Frame = +2
Query: 23 GLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDA 202
GL P++FT VL AC+R+ DV G IH + V+ +VFV T L+ +YAKCG + A
Sbjct: 209 GLSPDSFTLVRVLSACSRVGDVSAGEWIHRYAVEMDMGRNVFVNTGLVDMYAKCGEMAKA 268
Query: 203 HRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQL 382
+FDE+ E++VVSW+A+I GY G EA+++F R+ ++PD +++V VLSAC++L
Sbjct: 269 REVFDEMVEKDVVSWSAMIQGYAVNGLPKEAMEVFYRMQRENVRPDCYSMVGVLSACARL 328
Query: 383 GDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMI 562
G E GE + ++ N + T+L+DMY+K G M A +F +M KD V W+A++
Sbjct: 329 GALEVGEWACKLMDMNEFLSNAVLGTALIDMYAKCGRMVSAWEIFKQMLVKDRVIWNAVV 388
Query: 563 GGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFL 742
G A +G K A F Q+++ +KP+ T + +L AC+ G ++ G + + + +
Sbjct: 389 SGLAMHGYVKSAFCCFGQVEKLGIKPNGNTFIGLLCACTHAGLVDDGRKYFQSMT-HLYS 447
Query: 743 LNPVLGT--ALIDMYAKCGSMVQAWELFKGMKER-DLVVWNAVISGLAMNGHVQAAFGLF 913
L P + ++D+ + G + +A L + M + + V+W A++SG ++ + A +
Sbjct: 448 LEPAIEHYGCMVDLLGRAGLLDEAHSLIESMPMKANAVIWGALLSGCRLHRDTKLAEHVL 507
Query: 914 AQMEKLGTPPDGN 952
Q+ +L GN
Sbjct: 508 KQLIELEPWNSGN 520
Score = 79.3 bits (194), Expect = 2e-12
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
++ M++E + P+ ++ VL ACARL +++G + F + + T+L+ +YAK
Sbjct: 303 FYRMQRENVRPDCYSMVGVLSACARLGALEVGEWACKLMDMNEFLSNAVLGTALIDMYAK 362
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CG + A +F ++ ++ V W A++SG G A F ++ + +KP+ T + +
Sbjct: 363 CGRMVSAWEIFKQMLVKDRVIWNAVVSGLAMHGYVKSAFCCFGQVEKLGIKPNGNTFIGL 422
Query: 362 LSACSQLGDQEKGESI-----HRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEM 526
L AC+ G + G H Y E + +VD+ + G +++A S+ + M
Sbjct: 423 LCACTHAGLVDDGRKYFQSMTHLYSLEPAIEHY----GCMVDLLGRAGLLDEAHSLIESM 478
Query: 527 PEK-DVVTWSAMIGG 568
P K + V W A++ G
Sbjct: 479 PMKANAVIWGALLSG 493
>ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Fragaria vesca subsp. vesca]
Length = 688
Score = 499 bits (1284), Expect = e-138
Identities = 237/348 (68%), Positives = 289/348 (83%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
Y MR EGLFP+++TFPFVLKACAR D+Q+G+ +HT VVK GF+ DV+VKTSLLCLYAK
Sbjct: 102 YGSMRTEGLFPDSYTFPFVLKACARRLDLQIGLSVHTLVVKTGFDFDVYVKTSLLCLYAK 161
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CG++E AH++FD++PE++VVSWTAI+SGYI G+F EA+D F+RL+++ L+PDS +LVR
Sbjct: 162 CGYMEHAHKVFDDLPEKSVVSWTAIVSGYIGAGKFREAIDAFLRLLEMGLRPDSLSLVRA 221
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
+SACSQLGD GE I Y+ E GM RNVFVATSLVD+Y+K G+MEKAR VFD + EKDV
Sbjct: 222 ISACSQLGDLRSGEWIDDYITEIGMARNVFVATSLVDLYAKCGNMEKARFVFDGIAEKDV 281
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V WS+MI GYA NGLPKEA++LFFQMQ+E +KPDC+ MV VLSAC+RLG L +G+ S L
Sbjct: 282 VVWSSMIQGYALNGLPKEAVDLFFQMQKENLKPDCYAMVGVLSACARLGALGLGEWASNL 341
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
V++NE NPVLGTALIDMYAKCGS+VQAWE+FKGMK++D VVWNA +SGLAMNGHV+A
Sbjct: 342 VDRNEIFNNPVLGTALIDMYAKCGSIVQAWEVFKGMKKKDHVVWNAAMSGLAMNGHVKAV 401
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
FGLF Q+EK G GNTF+GLLC C HAGLVDEGR YF+SM YSL
Sbjct: 402 FGLFGQVEKYGVRATGNTFMGLLCGCCHAGLVDEGRSYFNSMTRVYSL 449
Score = 191 bits (485), Expect = 4e-46
Identities = 105/300 (35%), Positives = 170/300 (56%)
Frame = +2
Query: 107 HTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRF 286
H +++ G + D + T LL A +F E NV + II G + +
Sbjct: 36 HARLLRLGLDQDNHLLTLLLRSAFDFRQTNYALLVFHRTAEPNVYLFNTIIRGLVSHECW 95
Query: 287 FEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVATSL 466
+A+ ++ + L PDS+T VL AC++ D + G S+H V + G +V+V TSL
Sbjct: 96 EDAIRLYGSMRTEGLFPDSYTFPFVLKACARRLDLQIGLSVHTLVVKTGFDFDVYVKTSL 155
Query: 467 VDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPDC 646
+ +Y+K G ME A VFD++PEK VV+W+A++ GY G +EA++ F ++ ++PD
Sbjct: 156 LCLYAKCGYMEHAHKVFDDLPEKSVVSWTAIVSGYIGAGKFREAIDAFLRLLEMGLRPDS 215
Query: 647 FTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKG 826
++V +SACS+LG L G+ + + + N + T+L+D+YAKCG+M +A +F G
Sbjct: 216 LSLVRAISACSQLGDLRSGEWIDDYITEIGMARNVFVATSLVDLYAKCGNMEKARFVFDG 275
Query: 827 MKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEG 1006
+ E+D+VVW+++I G A+NG + A LF QM+K PD +G+L AC G + G
Sbjct: 276 IAEKDVVVWSSMIQGYALNGLPKEAVDLFFQMQKENLKPDCYAMVGVLSACARLGALGLG 335
>ref|XP_007010336.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
1 [Theobroma cacao] gi|590566803|ref|XP_007010337.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508727249|gb|EOY19146.1| Pentatricopeptide repeat
(PPR) superfamily protein, putative isoform 1 [Theobroma
cacao] gi|508727250|gb|EOY19147.1| Pentatricopeptide
repeat (PPR) superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 688
Score = 496 bits (1278), Expect = e-138
Identities = 239/348 (68%), Positives = 291/348 (83%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
Y MR +G PN+FTFPFVLKA ARL D+QLG+RIH VVK GF+ D+FVKT LLCLYAK
Sbjct: 102 YASMRSQGFLPNSFTFPFVLKAYARLLDLQLGIRIHALVVKLGFDCDIFVKTGLLCLYAK 161
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CG L+ A ++FD+IPE+NVVSWTA+ISGYI+ GR+ EAV+MF +L+++ L+PDSF+LVRV
Sbjct: 162 CGCLDRAIKVFDDIPEKNVVSWTAMISGYIDVGRYREAVNMFSKLLEMGLRPDSFSLVRV 221
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
L+AC+ LGD GE I R + + G+ R+VFVATS+VDMY+K G+MEKAR FD +PEKD+
Sbjct: 222 LAACAHLGDLNSGEWIDRSITQFGLSRDVFVATSVVDMYAKCGNMEKARLAFDGIPEKDI 281
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
VTWS MI GYASNGLPKEAL+LFFQMQ+EK+ PDC+ MV VLSAC+RLG LE+GD S+L
Sbjct: 282 VTWSTMIQGYASNGLPKEALDLFFQMQKEKLAPDCYVMVGVLSACARLGALELGDWASKL 341
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
+++ EFL NPVLGTALIDM+AKCGS+ QA+E+FK MKE+DLVVWNA ISGLAMNGHV+AA
Sbjct: 342 MDRAEFLSNPVLGTALIDMFAKCGSIAQAFEIFKRMKEKDLVVWNAAISGLAMNGHVKAA 401
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
FGLF+QMEK G P+GNTFIGLLC C H GLVD+G YFDSM +SL
Sbjct: 402 FGLFSQMEKSGVLPNGNTFIGLLCCCTHVGLVDDGHRYFDSMSRVFSL 449
Score = 190 bits (482), Expect = 1e-45
Identities = 106/310 (34%), Positives = 173/310 (55%), Gaps = 4/310 (1%)
Frame = +2
Query: 89 QLGVRIHTH----VVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPERNVVSWTAI 256
+LG+ H + ++KA F F +T+ CL +F++ + N+ W +
Sbjct: 41 RLGLHQHNYLLNIILKATFH---FGQTNYACL------------IFNQTKQPNIYLWNTM 85
Query: 257 ISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGM 436
I G + F EA + + P+SFT VL A ++L D + G IH V + G
Sbjct: 86 IQGLVSGDCFLEAAQFYASMRSQGFLPNSFTFPFVLKAYARLLDLQLGIRIHALVVKLGF 145
Query: 437 GRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQ 616
++FV T L+ +Y+K G +++A VFD++PEK+VV+W+AMI GY G +EA+ +F +
Sbjct: 146 DCDIFVKTGLLCLYAKCGCLDRAIKVFDDIPEKNVVSWTAMISGYIDVGRYREAVNMFSK 205
Query: 617 MQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGS 796
+ ++PD F++V VL+AC+ LG L G+ + R + + + + T+++DMYAKCG+
Sbjct: 206 LLEMGLRPDSFSLVRVLAACAHLGDLNSGEWIDRSITQFGLSRDVFVATSVVDMYAKCGN 265
Query: 797 MVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCA 976
M +A F G+ E+D+V W+ +I G A NG + A LF QM+K PD +G+L A
Sbjct: 266 MEKARLAFDGIPEKDIVTWSTMIQGYASNGLPKEALDLFFQMQKEKLAPDCYVMVGVLSA 325
Query: 977 CVHAGLVDEG 1006
C G ++ G
Sbjct: 326 CARLGALELG 335
Score = 102 bits (254), Expect = 3e-19
Identities = 62/231 (26%), Positives = 117/231 (50%), Gaps = 11/231 (4%)
Frame = +2
Query: 347 TLVRVLSACSQLGDQEKG-----------ESIHRYVEERGMGRNVFVATSLVDMYSKFGS 493
TL S+CS++ + K + +H + G+ ++ ++ ++ FG
Sbjct: 4 TLNSATSSCSKVTEITKRILGGFTSVRHLKQVHAALFRLGLHQHNYLLNIILKATFHFGQ 63
Query: 494 MEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSA 673
A +F++ + ++ W+ MI G S EA + + M+ + P+ FT VL A
Sbjct: 64 TNYACLIFNQTKQPNIYLWNTMIQGLVSGDCFLEAAQFYASMRSQGFLPNSFTFPFVLKA 123
Query: 674 CSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVW 853
+RL L++G + LV K F + + T L+ +YAKCG + +A ++F + E+++V W
Sbjct: 124 YARLLDLQLGIRIHALVVKLGFDCDIFVKTGLLCLYAKCGCLDRAIKVFDDIPEKNVVSW 183
Query: 854 NAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEG 1006
A+ISG G + A +F+++ ++G PD + + +L AC H G ++ G
Sbjct: 184 TAMISGYIDVGRYREAVNMFSKLLEMGLRPDSFSLVRVLAACAHLGDLNSG 234
>gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]
Length = 688
Score = 476 bits (1225), Expect = e-132
Identities = 230/348 (66%), Positives = 278/348 (79%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
Y MR++G PN FTFPFVLKACARLSD QLG+RIHTHVVK GF+ DVFVKTSLL LYA+
Sbjct: 102 YFSMRRQGFLPNGFTFPFVLKACARLSDFQLGLRIHTHVVKVGFDCDVFVKTSLLSLYAQ 161
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
G+L+ AH++FDEIPE+++VSWT+IISGYI GRF EAV MF R +++ L+PD + LVRV
Sbjct: 162 TGYLDRAHQVFDEIPEKSIVSWTSIISGYIGVGRFSEAVSMFRRSIEIGLRPDGYNLVRV 221
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
LSAC+Q GD E I RY+ E G+GRN+FVATSLVDMY+K G+MEKAR VFD MPEKDV
Sbjct: 222 LSACTQSGDLSSAEWIDRYLTENGLGRNLFVATSLVDMYAKCGNMEKARIVFDGMPEKDV 281
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V WS+MI GY NG KEA+ELF QM +E +KPDCF +V + SAC+RLG LE+G+ L
Sbjct: 282 VCWSSMIQGYVLNGPAKEAVELFLQMLKEGLKPDCFALVGLFSACARLGALELGNWARSL 341
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
++ +E L P LGT LIDMYAKCGS+VQAWE+FK +KE+DLV WNA ISGLAMNGHV+AA
Sbjct: 342 IDNDEILSVPALGTTLIDMYAKCGSVVQAWEVFKELKEKDLVSWNAAISGLAMNGHVKAA 401
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
FGLF +MEK P+GNTF+GLL C HAGLVDEGR YF++M ++L
Sbjct: 402 FGLFGKMEKSAIQPNGNTFVGLLSGCAHAGLVDEGRRYFNNMGSFFAL 449
Score = 193 bits (490), Expect = 1e-46
Identities = 102/301 (33%), Positives = 166/301 (55%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGR 283
+H +++ G + D F+ G +F + N+ W +I G +
Sbjct: 35 VHASLLRLGLDQDNFLLNLFFRYAFDFGNTSYPLLVFRHTKQPNIYVWNTVIRGLVSSHC 94
Query: 284 FFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVATS 463
F +A+D + + P+ FT VL AC++L D + G IH +V + G +VFV TS
Sbjct: 95 FDDAIDFYFSMRRQGFLPNGFTFPFVLKACARLSDFQLGLRIHTHVVKVGFDCDVFVKTS 154
Query: 464 LVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPD 643
L+ +Y++ G +++A VFDE+PEK +V+W+++I GY G EA+ +F + ++PD
Sbjct: 155 LLSLYAQTGYLDRAHQVFDEIPEKSIVSWTSIISGYIGVGRFSEAVSMFRRSIEIGLRPD 214
Query: 644 CFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFK 823
+ +V VLSAC++ G L + + R + +N N + T+L+DMYAKCG+M +A +F
Sbjct: 215 GYNLVRVLSACTQSGDLSSAEWIDRYLTENGLGRNLFVATSLVDMYAKCGNMEKARIVFD 274
Query: 824 GMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDE 1003
GM E+D+V W+++I G +NG + A LF QM K G PD +GL AC G ++
Sbjct: 275 GMPEKDVVCWSSMIQGYVLNGPAKEAVELFLQMLKEGLKPDCFALVGLFSACARLGALEL 334
Query: 1004 G 1006
G
Sbjct: 335 G 335
Score = 184 bits (466), Expect = 7e-44
Identities = 108/313 (34%), Positives = 179/313 (57%), Gaps = 3/313 (0%)
Frame = +2
Query: 23 GLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDA 202
GL P+ + VL AC + D+ I ++ + G ++FV TSL+ +YAKCG +E A
Sbjct: 210 GLRPDGYNLVRVLSACTQSGDLSSAEWIDRYLTENGLGRNLFVATSLVDMYAKCGNMEKA 269
Query: 203 HRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQL 382
+FD +PE++VV W+++I GY+ G EAV++F++++ LKPD F LV + SAC++L
Sbjct: 270 RIVFDGMPEKDVVCWSSMIQGYVLNGPAKEAVELFLQMLKEGLKPDCFALVGLFSACARL 329
Query: 383 GDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMI 562
G E G ++ + + T+L+DMY+K GS+ +A VF E+ EKD+V+W+A I
Sbjct: 330 GALELGNWARSLIDNDEILSVPALGTTLIDMYAKCGSVVQAWEVFKELKEKDLVSWNAAI 389
Query: 563 GGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFL 742
G A NG K A LF +M++ ++P+ T V +LS C+ G ++ G + + F
Sbjct: 390 SGLAMNGHVKAAFGLFGKMEKSAIQPNGNTFVGLLSGCAHAGLVDEGRRYFNNMG-SFFA 448
Query: 743 LNPVLGT--ALIDMYAKCGSMVQAWELFKGMKER-DLVVWNAVISGLAMNGHVQAAFGLF 913
L P + ++D+ ++ G + +A EL K M + + VVW A++ G ++ Q A +
Sbjct: 449 LAPSIEHYGCMVDLLSRAGLLGEAHELIKSMPMKANAVVWGALLGGCRIHRDTQLAEHVL 508
Query: 914 AQMEKLGTPPDGN 952
Q+ +L GN
Sbjct: 509 KQLIELEPWSSGN 521
>ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citrus clementina]
gi|568855070|ref|XP_006481133.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g08820-like [Citrus sinensis]
gi|557531571|gb|ESR42754.1| hypothetical protein
CICLE_v10011209mg [Citrus clementina]
Length = 688
Score = 476 bits (1225), Expect = e-132
Identities = 230/348 (66%), Positives = 280/348 (80%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
Y+ MR EG P NFTFPFVLKACAR D QLGVR H+ +VKAG + D FVKTSLL LY
Sbjct: 102 YNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVH 161
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CG+L DA ++FD+IP++NVVSWTAIISGYI G EA++MF RL+ LKPDSF++VRV
Sbjct: 162 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 221
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
L+AC+QLGD + IH YV E GMGRNVFVATSLVD+Y+K G+MEKAR VFD+MPEKD+
Sbjct: 222 LTACTQLGDLSTAKWIHGYVNEAGMGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI 281
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V+WS+MI GYASNG PKEAL++F+ MQRE +KPD +TMV VLSAC+ LG LE+G S
Sbjct: 282 VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPDRYTMVGVLSACASLGALELGVWASSF 341
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
+E+NEFL NPVLGT LIDMYAKCG M QA ++F+ MK++D VVWNAV+SGL+MNG+V+ A
Sbjct: 342 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 401
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
FG+F Q+EK G P+GNTF+GLLC C HAGLVDEGR +F+SM +SL
Sbjct: 402 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 449
Score = 185 bits (469), Expect = 3e-44
Identities = 96/301 (31%), Positives = 168/301 (55%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGR 283
+H +++ G + D ++ LL G H +F + E N+ + +I G++
Sbjct: 35 VHAILLRVGLDQDSYLLNLLLRSCFHFGQTNYTHLIFSQTKEPNIFLYNTMIRGFVSNDC 94
Query: 284 FFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVATS 463
F A++ + + + P +FT VL AC++ D + G H + + G+ + FV TS
Sbjct: 95 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 154
Query: 464 LVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPD 643
L+++Y G + A VFD++P+K+VV+W+A+I GY + G +EA+ +F ++ +KPD
Sbjct: 155 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 214
Query: 644 CFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFK 823
F++V VL+AC++LG L + V + N + T+L+D+YAKCG+M +A +F
Sbjct: 215 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGMGRNVFVATSLVDLYAKCGNMEKARRVFD 274
Query: 824 GMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDE 1003
M E+D+V W+++I G A NG + A +F M++ PD T +G+L AC G ++
Sbjct: 275 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPDRYTMVGVLSACASLGALEL 334
Query: 1004 G 1006
G
Sbjct: 335 G 335
>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550321449|gb|EEF05406.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 682
Score = 471 bits (1212), Expect = e-130
Identities = 226/348 (64%), Positives = 279/348 (80%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
YH MRKEGL P++FTFPFVLKACAR+ D +LGV++H+ VVKAG E D FVK SL+ LY K
Sbjct: 96 YHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTK 155
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CGF+++A ++FD+IP++N SWTA ISGY+ G+ EA+DMF RL+++ L+PDSF+LV V
Sbjct: 156 CGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEV 215
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
LSAC + GD GE I Y+ E GM RNVFVAT+LVD Y K G+ME+ARSVFD M EK++
Sbjct: 216 LSACKRTGDLRSGEWIDEYITENGMARNVFVATALVDFYGKCGNMERARSVFDGMLEKNI 275
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V+WS+MI GYASNGLPKEAL+LFF+M E +KPDC+ MV VL +C+RLG LE+GD S L
Sbjct: 276 VSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNL 335
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
+ NEFL N VLGTALIDMYAKCG M +AWE+F+GM+++D VVWNA ISGLAM+GHV+ A
Sbjct: 336 INGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDA 395
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
GLF QMEK G PD NTF+GLLCAC HAGLV+EGR YF+SM Y+L
Sbjct: 396 LGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVYTL 443
Score = 200 bits (508), Expect = 9e-49
Identities = 101/301 (33%), Positives = 171/301 (56%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGR 283
IH +++ G + D ++ +L G + R+ D+ E N+ + +I G +
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88
Query: 284 FFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVATS 463
F E+++++ + L PDSFT VL AC+++ D E G +H V + G + FV S
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148
Query: 464 LVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPD 643
L+++Y+K G ++ A VFD++P+K+ +W+A I GY G +EA+++F ++ ++PD
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208
Query: 644 CFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFK 823
F++V VLSAC R G L G+ + + +N N + TAL+D Y KCG+M +A +F
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMARNVFVATALVDFYGKCGNMERARSVFD 268
Query: 824 GMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDE 1003
GM E+++V W+++I G A NG + A LF +M G PD +G+LC+C G ++
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328
Query: 1004 G 1006
G
Sbjct: 329 G 329
>ref|XP_002526706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534006|gb|EEF35728.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 461
Score = 467 bits (1202), Expect = e-129
Identities = 223/342 (65%), Positives = 273/342 (79%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
Y+ MRK+G PNNFTFPFV+KACARL D QLG+ +HT VVK GF+ ++FV TSL+ LYAK
Sbjct: 102 YYSMRKKGFLPNNFTFPFVIKACARLLDFQLGIMMHTLVVKLGFDCNLFVNTSLVSLYAK 161
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CG ++DA ++ D IPE N+VSWTAIISGYI G++ EA+D+F R+++ L+PDSFT+V+V
Sbjct: 162 CGSIDDALKMLDLIPESNIVSWTAIISGYIGVGKYREAIDLFRRMLETGLRPDSFTIVQV 221
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
LSAC Q+GD GE I RY+ E M RNVFV TSLVD+Y+K G+MEKAR +FD M E+D+
Sbjct: 222 LSACIQIGDLANGEWIDRYITENVMARNVFVTTSLVDLYAKHGNMEKARCLFDGMAERDI 281
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V+WSAMI GYASNGLPK+AL+LFF+M +KPD + MV L AC+RLG LE+GD S L
Sbjct: 282 VSWSAMIQGYASNGLPKDALDLFFKMLNAGLKPDHYAMVGFLCACARLGALELGDWGSNL 341
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
+++ EF N VLGTALIDMYAKCGSM +AWE+FKG+K +D VWNA ISGLAMNGH +AA
Sbjct: 342 MDRTEFFTNHVLGTALIDMYAKCGSMAKAWEVFKGIKGKDRAVWNAAISGLAMNGHEKAA 401
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSM 1027
FGLF QME+ G PDGNTF+GLLC C HAGLVDEGR YF SM
Sbjct: 402 FGLFGQMERFGIQPDGNTFVGLLCGCTHAGLVDEGRKYFHSM 443
Score = 197 bits (500), Expect = 8e-48
Identities = 105/301 (34%), Positives = 174/301 (57%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGR 283
+H +++ GF+ ++ + ++ +F++I E +VV + +I G +
Sbjct: 35 VHAALLRLGFDQGSYLWSMIIRSSFDFNDTTYTRLIFNQIKEPDVVLYNTMIRGLVSSDC 94
Query: 284 FFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVATS 463
F E+++ + + P++FT V+ AC++L D + G +H V + G N+FV TS
Sbjct: 95 FTESIEFYYSMRKKGFLPNNFTFPFVIKACARLLDFQLGIMMHTLVVKLGFDCNLFVNTS 154
Query: 464 LVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPD 643
LV +Y+K GS++ A + D +PE ++V+W+A+I GY G +EA++LF +M ++PD
Sbjct: 155 LVSLYAKCGSIDDALKMLDLIPESNIVSWTAIISGYIGVGKYREAIDLFRRMLETGLRPD 214
Query: 644 CFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFK 823
FT+V VLSAC ++G L G+ + R + +N N + T+L+D+YAK G+M +A LF
Sbjct: 215 SFTIVQVLSACIQIGDLANGEWIDRYITENVMARNVFVTTSLVDLYAKHGNMEKARCLFD 274
Query: 824 GMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDE 1003
GM ERD+V W+A+I G A NG + A LF +M G PD +G LCAC G ++
Sbjct: 275 GMAERDIVSWSAMIQGYASNGLPKDALDLFFKMLNAGLKPDHYAMVGFLCACARLGALEL 334
Query: 1004 G 1006
G
Sbjct: 335 G 335
>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 455 bits (1171), Expect = e-125
Identities = 216/348 (62%), Positives = 277/348 (79%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
Y MR G PNNFT PFVLKACAR DV+LG++IH+ +VKAG++ DVFVKTSLL LY K
Sbjct: 102 YGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVK 161
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
C +DA ++FD+IP++NVVSWTAII+GYI G F EA+ F +L+++ LKPDSF+LV+V
Sbjct: 162 CDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKV 221
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
L+AC++LGD GE I RY+ + GMGRNVFVATSL+DMY K G++E+A +F MPEKD+
Sbjct: 222 LAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDI 281
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V+WS MI GYA NGLP++AL+LFFQMQ E +KPDC+TMV VLSAC+ LG L++G S L
Sbjct: 282 VSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSL 341
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
+++NEFL NPVLGTALIDMY+KCGS+ QAWE+F MK++D VVWNA++ GL+MNGH +A
Sbjct: 342 MDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAV 401
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
F LF+ +EK G PD NTFIGLLC C H G V+EGR +F++M+ +SL
Sbjct: 402 FSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSL 449
Score = 197 bits (500), Expect = 8e-48
Identities = 103/301 (34%), Positives = 170/301 (56%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGR 283
IH +++ + D ++ +LC G + +F ++ E N+ W +I G +
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 284 FFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVATS 463
F +A+ ++ + P++FT+ VL AC++ D G IH + + G +VFV TS
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 464 LVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPD 643
L+ +Y K + + A VFD++P+K+VV+W+A+I GY S+G +EA+ F ++ +KPD
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 644 CFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFK 823
F++V VL+AC+RLG G+ + R + + N + T+L+DMY KCG++ +A +F
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFS 274
Query: 824 GMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDE 1003
M E+D+V W+ +I G A NG Q A LF QM+ PD T +G+L AC G +D
Sbjct: 275 AMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334
Query: 1004 G 1006
G
Sbjct: 335 G 335
Score = 75.5 bits (184), Expect = 3e-11
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 8/194 (4%)
Frame = +2
Query: 11 MRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGF 190
M+ E L P+ +T VL ACA L + LG+ + + + F + + T+L+ +Y+KCG
Sbjct: 307 MQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGS 366
Query: 191 LEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSA 370
+ A +F + +++ V W A++ G G +F + ++PD T + +L
Sbjct: 367 VTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCG 426
Query: 371 CSQLGDQEKGESIHRYVEERGMGRNVFVATS-------LVDMYSKFGSMEKARSVFDEMP 529
C+ G +G + + VF T +VD+ + G + +A + + MP
Sbjct: 427 CTHGGFVNEGRQFFNNM------KRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMP 480
Query: 530 EK-DVVTWSAMIGG 568
K + V W A++GG
Sbjct: 481 MKPNAVVWGALLGG 494
>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 455 bits (1170), Expect = e-125
Identities = 216/348 (62%), Positives = 276/348 (79%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
Y MR G PNNFT PFVLKACAR DV+LG++IH+ +VKAG++ DVFVKTSLL LY K
Sbjct: 102 YGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVK 161
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
C +DA ++FD+IP++NVVSWTAII+GYI G F EA+ F +L+++ LKPDSF+LV+V
Sbjct: 162 CDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKV 221
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
L+AC++LGD GE I RY+ + GMGRNVFVATSL+DMY K G++E+A +F MPEKD+
Sbjct: 222 LAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDI 281
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V+WS MI GYA NGLP++AL+LFFQMQ E +KPDC+TMV VLSAC+ LG L++G S L
Sbjct: 282 VSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSL 341
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
+++NEFL NPVLGTALIDMY+KCGS+ QAWE+F MK +D VVWNA++ GL+MNGH +A
Sbjct: 342 MDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAV 401
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
F LF+ +EK G PD NTFIGLLC C H G V+EGR +F++M+ +SL
Sbjct: 402 FSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSL 449
Score = 197 bits (500), Expect = 8e-48
Identities = 103/301 (34%), Positives = 170/301 (56%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGR 283
IH +++ + D ++ +LC G + +F ++ E N+ W +I G +
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 284 FFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVATS 463
F +A+ ++ + P++FT+ VL AC++ D G IH + + G +VFV TS
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 464 LVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPD 643
L+ +Y K + + A VFD++P+K+VV+W+A+I GY S+G +EA+ F ++ +KPD
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 644 CFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFK 823
F++V VL+AC+RLG G+ + R + + N + T+L+DMY KCG++ +A +F
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFS 274
Query: 824 GMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDE 1003
M E+D+V W+ +I G A NG Q A LF QM+ PD T +G+L AC G +D
Sbjct: 275 AMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334
Query: 1004 G 1006
G
Sbjct: 335 G 335
Score = 75.1 bits (183), Expect = 5e-11
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Frame = +2
Query: 11 MRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGF 190
M+ E L P+ +T VL ACA L + LG+ + + + F + + T+L+ +Y+KCG
Sbjct: 307 MQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGS 366
Query: 191 LEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSA 370
+ A +F + ++ V W A++ G G +F + ++PD T + +L
Sbjct: 367 VTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCG 426
Query: 371 CSQLGDQEKGESIHRYVEERGMGRNVFVATS-------LVDMYSKFGSMEKARSVFDEMP 529
C+ G +G + + VF T +VD+ + G + +A + + MP
Sbjct: 427 CTHGGFVNEGRQFFNNM------KRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMP 480
Query: 530 EK-DVVTWSAMIGG 568
K + V W A++GG
Sbjct: 481 MKPNAVVWGALLGG 494
>ref|XP_003539649.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like isoform X1 [Glycine max]
gi|571494895|ref|XP_006592973.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g08820-like isoform X2 [Glycine max]
Length = 681
Score = 451 bits (1159), Expect = e-124
Identities = 224/349 (64%), Positives = 272/349 (77%), Gaps = 1/349 (0%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDV-QLGVRIHTHVVKAGFELDVFVKTSLLCLYA 178
Y MR+ G P+NFTFPFVLKAC RL +G+ +H+ V+K GF+ DVFVKT L+CLY+
Sbjct: 94 YASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYS 153
Query: 179 KCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVR 358
K GFL DA ++FDEIPE+NVVSWTAII GYIE G F EA+ +F L+++ L+PDSFTLVR
Sbjct: 154 KNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVR 213
Query: 359 VLSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKD 538
+L ACS++GD G I Y+ E G NVFVATSLVDMY+K GSME+AR VFD M EKD
Sbjct: 214 ILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKD 273
Query: 539 VVTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSR 718
VV WSA+I GYASNG+PKEAL++FF+MQRE V+PDC+ MV V SACSRLG LE+G+
Sbjct: 274 VVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARG 333
Query: 719 LVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQA 898
L++ +EFL NPVLGTALID YAKCGS+ QA E+FKGM+ +D VV+NAVISGLAM GHV A
Sbjct: 334 LMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGA 393
Query: 899 AFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
AFG+F QM K+G PDGNTF+GLLC C HAGLVD+G YF M +S+
Sbjct: 394 AFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSV 442
Score = 192 bits (487), Expect = 3e-46
Identities = 113/319 (35%), Positives = 174/319 (54%), Gaps = 3/319 (0%)
Frame = +2
Query: 59 LKACAR--LSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPER 232
LK C L + + H +++ G D ++ LL + A +F + P
Sbjct: 10 LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHP 69
Query: 233 NVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQ-EKGESI 409
N+ + +I G + F +AV ++ + PD+FT VL AC++L G S+
Sbjct: 70 NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSL 129
Query: 410 HRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLP 589
H V + G +VFV T LV +YSK G + AR VFDE+PEK+VV+W+A+I GY +G
Sbjct: 130 HSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCF 189
Query: 590 KEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTAL 769
EAL LF + ++PD FT+V +L ACSR+G L G + + ++ + N + T+L
Sbjct: 190 GEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSL 249
Query: 770 IDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDG 949
+DMYAKCGSM +A +F GM E+D+V W+A+I G A NG + A +F +M++ PD
Sbjct: 250 VDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDC 309
Query: 950 NTFIGLLCACVHAGLVDEG 1006
+G+ AC G ++ G
Sbjct: 310 YAMVGVFSACSRLGALELG 328
Score = 97.4 bits (241), Expect = 8e-18
Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Frame = +2
Query: 395 KGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYA 574
+ + H + G+ ++ ++ L+ F + + A VF + P ++ ++ +I G
Sbjct: 23 QAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMV 82
Query: 575 SNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRL-GTLEVGDSVSRLVEKNEFLLNP 751
SN ++A+ ++ M++ PD FT VL AC+RL VG S+ LV K F +
Sbjct: 83 SNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDV 142
Query: 752 VLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKL 931
+ T L+ +Y+K G + A ++F + E+++V W A+I G +G A GLF + ++
Sbjct: 143 FVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEM 202
Query: 932 GTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
G PD T + +L AC G + GR MR + S+
Sbjct: 203 GLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSV 240
>ref|XP_007133846.1| hypothetical protein PHAVU_011G213900g [Phaseolus vulgaris]
gi|561006846|gb|ESW05840.1| hypothetical protein
PHAVU_011G213900g [Phaseolus vulgaris]
Length = 690
Score = 441 bits (1135), Expect = e-121
Identities = 218/349 (62%), Positives = 270/349 (77%), Gaps = 1/349 (0%)
Frame = +2
Query: 2 YHLMRKEGLF-PNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYA 178
Y MR+ F P+NFTFPFVLKACARL + +G+ IH+ V++ GFE DVFV T L+C Y+
Sbjct: 103 YASMRQRSAFAPDNFTFPFVLKACARLRNTHVGLTIHSLVIRTGFEKDVFVNTGLVCFYS 162
Query: 179 KCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVR 358
K GFL A R+FDEIPE+NVVSWTAII GY+EFG EAV +F L+++ +KPDSFTLVR
Sbjct: 163 KNGFLSHARRVFDEIPEKNVVSWTAIICGYVEFGYCEEAVGLFRGLLEMGVKPDSFTLVR 222
Query: 359 VLSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKD 538
VL ACS+ GD G I Y+ E G+ NVFVATSLVDMY+K GSME+AR VFD M E+D
Sbjct: 223 VLYACSRTGDLASGRWIDGYMRETGLCGNVFVATSLVDMYTKCGSMEEARRVFDGMVERD 282
Query: 539 VVTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSR 718
VV WSA+I GYA+NG+PK+ALE+FF+MQRE V+PDC+ MV LS C+RLG LE+G+
Sbjct: 283 VVCWSALIQGYAANGMPKKALEVFFEMQRENVRPDCYAMVGFLSGCARLGALELGNWARG 342
Query: 719 LVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQA 898
LV+ +EFL NPVLGTALID YAKCG++ +A E+F M+ +D VV+NAVISGLAM GHV A
Sbjct: 343 LVDGDEFLCNPVLGTALIDFYAKCGNVARAVEVFNSMRRKDCVVFNAVISGLAMCGHVGA 402
Query: 899 AFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
AFG+F+QM K+G PDGNTF+GLLC C HAGLVD+GR YF+ M + +
Sbjct: 403 AFGVFSQMGKVGMQPDGNTFVGLLCGCTHAGLVDDGRRYFNRMSCVFDV 451
Score = 75.9 bits (185), Expect = 3e-11
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Frame = +2
Query: 11 MRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGF 190
M++E + P+ + L CARL ++LG V F + + T+L+ YAKCG
Sbjct: 309 MQRENVRPDCYAMVGFLSGCARLGALELGNWARGLVDGDEFLCNPVLGTALIDFYAKCGN 368
Query: 191 LEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSA 370
+ A +F+ + ++ V + A+ISG G A +F ++ V ++PD T V +L
Sbjct: 369 VARAVEVFNSMRRKDCVVFNAVISGLAMCGHVGAAFGVFSQMGKVGMQPDGNTFVGLLCG 428
Query: 371 CSQLGDQEKGESIHRYVEERGMGRNVFVATS----LVDMYSKFGSMEKARSVFDEMPEK- 535
C+ G + G RY +V +VD+ ++ G + +AR + MP K
Sbjct: 429 CTHAGLVDDGR---RYFNRMSCVFDVTPTIEHYGCMVDLLARAGLLVEARDLIKSMPMKA 485
Query: 536 DVVTWSAMIGG 568
+ + W A++GG
Sbjct: 486 NAIVWGALLGG 496
>gb|EPS63455.1| hypothetical protein M569_11327 [Genlisea aurea]
Length = 685
Score = 432 bits (1112), Expect = e-119
Identities = 207/346 (59%), Positives = 263/346 (76%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
+++MRK+G PNNFTFPFVLK+C+R D+ LGV++H+ VVKAGF+ DVFV T L+ Y+K
Sbjct: 98 FYMMRKQGFLPNNFTFPFVLKSCSRRMDLGLGVKVHSLVVKAGFDTDVFVSTGLVGFYSK 157
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
L+DA ++F EIPE+NVV+WTA+I GYI RF EA+ +F V +L+PDSFTLV++
Sbjct: 158 LERLDDALKVFVEIPEKNVVTWTALIGGYIGAHRFREAIHLFQSSVTTDLRPDSFTLVQI 217
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
LS CS LGD G+ IH ++ ER RNVFV T+LVDMY+K G ME AR VFDEMPEKD+
Sbjct: 218 LSCCSHLGDLSAGQWIHNFIIERKTARNVFVNTALVDMYAKCGGMESARLVFDEMPEKDI 277
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
VTW M+ GYASNG PK+ALE+F +MQ + ++PDC+ +V VLS+C+RLG L++G+S +
Sbjct: 278 VTWGTMVQGYASNGFPKQALEIFSRMQEQNLRPDCYVIVGVLSSCARLGALQLGESAFEM 337
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
+ KNEFL NPV+GTALIDMY+KCG M A +LF+ MK DLV+ NAVISGLAM GHV AA
Sbjct: 338 MGKNEFLSNPVMGTALIDMYSKCGKMDAAMDLFRQMKALDLVILNAVISGLAMTGHVHAA 397
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAY 1039
F FA +EK G PDGNTF+GLLC C HAGLV +GR +F M Y
Sbjct: 398 FSCFALLEKKGFEPDGNTFLGLLCGCTHAGLVRDGRRFFSLMSSRY 443
Score = 182 bits (462), Expect = 2e-43
Identities = 96/273 (35%), Positives = 147/273 (53%)
Frame = +2
Query: 209 LFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGD 388
+F + N + +I G + F +A++ F + P++FT VL +CS+ D
Sbjct: 66 VFGQTLRPNFYLYNTMIRGLVSNDCFSQAIEYFYMMRKQGFLPNNFTFPFVLKSCSRRMD 125
Query: 389 QEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGG 568
G +H V + G +VFV+T LV YSK ++ A VF E+PEK+VVTW+A+IGG
Sbjct: 126 LGLGVKVHSLVVKAGFDTDVFVSTGLVGFYSKLERLDDALKVFVEIPEKNVVTWTALIGG 185
Query: 569 YASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLN 748
Y +EA+ LF ++PD FT+V +LS CS LG L G + + + + N
Sbjct: 186 YIGAHRFREAIHLFQSSVTTDLRPDSFTLVQILSCCSHLGDLSAGQWIHNFIIERKTARN 245
Query: 749 PVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEK 928
+ TAL+DMYAKCG M A +F M E+D+V W ++ G A NG + A +F++M++
Sbjct: 246 VFVNTALVDMYAKCGGMESARLVFDEMPEKDIVTWGTMVQGYASNGFPKQALEIFSRMQE 305
Query: 929 LGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSM 1027
PD +G+L +C G + G F+ M
Sbjct: 306 QNLRPDCYVIVGVLSSCARLGALQLGESAFEMM 338
Score = 168 bits (426), Expect = 3e-39
Identities = 93/296 (31%), Positives = 165/296 (55%), Gaps = 4/296 (1%)
Frame = +2
Query: 26 LFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAH 205
L P++FT +L C+ L D+ G IH +++ +VFV T+L+ +YAKCG +E A
Sbjct: 207 LRPDSFTLVQILSCCSHLGDLSAGQWIHNFIIERKTARNVFVNTALVDMYAKCGGMESAR 266
Query: 206 RLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLG 385
+FDE+PE+++V+W ++ GY G +A+++F R+ + L+PD + +V VLS+C++LG
Sbjct: 267 LVFDEMPEKDIVTWGTMVQGYASNGFPKQALEIFSRMQEQNLRPDCYVIVGVLSSCARLG 326
Query: 386 DQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIG 565
+ GES + + N + T+L+DMYSK G M+ A +F +M D+V +A+I
Sbjct: 327 ALQLGESAFEMMGKNEFLSNPVMGTALIDMYSKCGKMDAAMDLFRQMKALDLVILNAVIS 386
Query: 566 GYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLL 745
G A G A F ++++ +PD T + +L C+ G + G L+ F
Sbjct: 387 GLAMTGHVHAAFSCFALLEKKGFEPDGNTFLGLLCGCTHAGLVRDGRRFFSLMSSRYF-- 444
Query: 746 NPVL---GTALIDMYAKCGSMVQAWELFKGMK-ERDLVVWNAVISGLAMNGHVQAA 901
PV A+ D+ ++ G + +A +L + M + + +VW A+++G ++ + A
Sbjct: 445 TPVTIEHYGAMADLLSRAGLLNEAQQLIESMPVKANAIVWGALLNGCRLHRDTKLA 500
Score = 80.9 bits (198), Expect = 8e-13
Identities = 49/167 (29%), Positives = 80/167 (47%)
Frame = +2
Query: 509 SVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLG 688
+VF + + ++ MI G SN +A+E F+ M+++ P+ FT VL +CSR
Sbjct: 65 AVFGQTLRPNFYLYNTMIRGLVSNDCFSQAIEYFYMMRKQGFLPNNFTFPFVLKSCSRRM 124
Query: 689 TLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVIS 868
L +G V LV K F + + T L+ Y+K + A ++F + E+++V W A+I
Sbjct: 125 DLGLGVKVHSLVVKAGFDTDVFVSTGLVGFYSKLERLDDALKVFVEIPEKNVVTWTALIG 184
Query: 869 GLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGR 1009
G + A LF PD T + +L C H G + G+
Sbjct: 185 GYIGAHRFREAIHLFQSSVTTDLRPDSFTLVQILSCCSHLGDLSAGQ 231
>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 678
Score = 431 bits (1109), Expect = e-118
Identities = 212/348 (60%), Positives = 268/348 (77%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
Y M K + P++FTF FVLKACARL+ LGV IH+ V K GF+ DVFVKT+++C Y+K
Sbjct: 92 YASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSK 151
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CGFL DA ++FD++ +NVVSWT +I G IEFG+F EAVD+F L++ L+PD F +VRV
Sbjct: 152 CGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRV 211
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
L AC++LGD E G I R + E G+ RNVFVATSLVDMY+K GSME+AR VFD M EKD+
Sbjct: 212 LRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDI 271
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V WSAMI GYASNGLP+EA+ELFF+M++ V+PDC+ MV LS+C+ LG LE+G+ L
Sbjct: 272 VCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGL 331
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
+ EFL NPVLGT+LID YAKCGSM +A ++K MKE+D VV+NAVISGLAM G V AA
Sbjct: 332 MNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAA 391
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
FG+F QM K G PP+ +TF+GLLC C HAGLVD+GR YF+SM + +S+
Sbjct: 392 FGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSV 439
Score = 179 bits (454), Expect = 2e-42
Identities = 102/267 (38%), Positives = 147/267 (55%)
Frame = +2
Query: 233 NVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIH 412
N + +I G + RF AV ++ + + PDSFT VL AC++L G IH
Sbjct: 68 NTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIH 127
Query: 413 RYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPK 592
V + G +VFV T++V YSK G + A VFD+M K+VV+W+ MI G G +
Sbjct: 128 SLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFR 187
Query: 593 EALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALI 772
EA++LF + ++PD F +V VL AC+RLG LE G + R + + N + T+L+
Sbjct: 188 EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLV 247
Query: 773 DMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGN 952
DMY KCGSM +A +F GM E+D+V W+A+I G A NG + A LF +M K+ PD
Sbjct: 248 DMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCY 307
Query: 953 TFIGLLCACVHAGLVDEGRCYFDSMRY 1033
+G L +C G ++ G M Y
Sbjct: 308 AMVGALSSCASLGALELGNWAKGLMNY 334
>ref|XP_004487107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like isoform X1 [Cicer arietinum]
gi|502082246|ref|XP_004487108.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g08820-like isoform X2 [Cicer arietinum]
Length = 668
Score = 426 bits (1094), Expect = e-116
Identities = 213/348 (61%), Positives = 265/348 (76%)
Frame = +2
Query: 2 YHLMRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAK 181
Y M K L P+NFTFPFVLKACARL+ QLG+ IH+ V+K GF+ DVFVKT+++C Y+K
Sbjct: 93 YSSMHKASLIPDNFTFPFVLKACARLNLFQLGIAIHSLVIKTGFDYDVFVKTNIVCFYSK 152
Query: 182 CGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRV 361
CGFL DA ++FD+I ++NVVSWTAII G ++F L+++ L+PD F +VRV
Sbjct: 153 CGFLTDARKVFDDIRDKNVVSWTAIIGG-----------ELFRGLLEMGLRPDGFVIVRV 201
Query: 362 LSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDV 541
L AC++LGD E G I + E G+ RNVFVATSLVDMY+K GSME+AR VFD M EKDV
Sbjct: 202 LRACARLGDLESGRWIDWCMSECGLHRNVFVATSLVDMYAKCGSMEEARCVFDGMVEKDV 261
Query: 542 VTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRL 721
V WSAMI GYASNGLP+EALELFF+M++ V+PDC+ MV LSAC+RLG LE+G L
Sbjct: 262 VCWSAMIHGYASNGLPREALELFFEMRKVNVRPDCYAMVGFLSACARLGALEMGIWAKGL 321
Query: 722 VEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAA 901
++ EFL NPVLGT+LID+YAKCGS+ +A ++K MKE+D VV+NAVISGLAM GHV A
Sbjct: 322 MDDEEFLSNPVLGTSLIDLYAKCGSVEEALGVYKMMKEKDRVVFNAVISGLAMYGHVGTA 381
Query: 902 FGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSL 1045
FG+F QM K G PD NTF+GLLC C HAGLVD+GR YF+SM A+S+
Sbjct: 382 FGVFGQMGKCGIWPDENTFVGLLCGCTHAGLVDDGRRYFNSMSCAFSV 429
Score = 180 bits (456), Expect = 1e-42
Identities = 109/311 (35%), Positives = 169/311 (54%), Gaps = 1/311 (0%)
Frame = +2
Query: 77 LSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPER-NVVSWTA 253
L DV+L H +++ + D ++ +L + ++ +F + P N +
Sbjct: 19 LKDVKLA---HCRLLRLNLQQDNYLPNIILRSSLTLSNTQYSNLVFHKTPTYPNTFLYNT 75
Query: 254 IISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERG 433
+I G + RF +AV ++ + L PD+FT VL AC++L + G +IH V + G
Sbjct: 76 MIRGMVSNDRFHDAVQLYSSMHKASLIPDNFTFPFVLKACARLNLFQLGIAIHSLVIKTG 135
Query: 434 MGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFF 613
+VFV T++V YSK G + AR VFD++ +K+VV+W+A+IGG ELF
Sbjct: 136 FDYDVFVKTNIVCFYSKCGFLTDARKVFDDIRDKNVVSWTAIIGG-----------ELFR 184
Query: 614 QMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCG 793
+ ++PD F +V VL AC+RLG LE G + + + N + T+L+DMYAKCG
Sbjct: 185 GLLEMGLRPDGFVIVRVLRACARLGDLESGRWIDWCMSECGLHRNVFVATSLVDMYAKCG 244
Query: 794 SMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLC 973
SM +A +F GM E+D+V W+A+I G A NG + A LF +M K+ PD +G L
Sbjct: 245 SMEEARCVFDGMVEKDVVCWSAMIHGYASNGLPREALELFFEMRKVNVRPDCYAMVGFLS 304
Query: 974 ACVHAGLVDEG 1006
AC G ++ G
Sbjct: 305 ACARLGALEMG 315
>ref|XP_006418524.1| hypothetical protein EUTSA_v10002816mg [Eutrema salsugineum]
gi|557096452|gb|ESQ36960.1| hypothetical protein
EUTSA_v10002816mg [Eutrema salsugineum]
Length = 685
Score = 409 bits (1051), Expect = e-111
Identities = 197/345 (57%), Positives = 262/345 (75%)
Frame = +2
Query: 14 RKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGFL 193
RK GL + FTFPFVLKAC R +++LG+ +H+ VVK GF DV TSLL +Y+ G L
Sbjct: 103 RKHGLSLHGFTFPFVLKACTRSQNLKLGIDLHSLVVKCGFSHDVCAMTSLLSVYSGSGRL 162
Query: 194 EDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSAC 373
+DAH+LFDEIPER+VVSWTA +SGYI G+ EA+D+F +V++ ++PDS+ +VRVL+AC
Sbjct: 163 DDAHKLFDEIPERSVVSWTAFVSGYISAGKHREAIDLFREMVEMGVRPDSYLIVRVLTAC 222
Query: 374 SQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWS 553
++GD + E I + VEE GM +N FV T+LV++Y+K G MEKARSVFD M EKD+VTWS
Sbjct: 223 VRVGDLDSAEWIDKLVEEIGMPKNCFVCTTLVNLYAKRGKMEKARSVFDSMAEKDIVTWS 282
Query: 554 AMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKN 733
MI GYASN LPKE +ELF QM RE +KPD +++V LS+C+ LG L++G+ S L++++
Sbjct: 283 TMIQGYASNSLPKEGVELFLQMLRENLKPDQYSIVGFLSSCASLGALDLGEWGSSLIDRH 342
Query: 734 EFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGLF 913
EFL N V+G ALIDMYAKCG+M + +++FK MKERD V+ N I+GLA NGHV+ +F +F
Sbjct: 343 EFLNNLVMGNALIDMYAKCGAMARGFQVFKDMKERDRVIMNTAITGLAKNGHVKLSFAVF 402
Query: 914 AQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSLK 1048
Q EKLG PDG TF+GLLC CVHAGL+ +G +F++M YSLK
Sbjct: 403 GQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNAMSCIYSLK 447
Score = 169 bits (428), Expect = 2e-39
Identities = 98/304 (32%), Positives = 159/304 (52%), Gaps = 3/304 (0%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHR---LFDEIPERNVVSWTAIISGYIE 274
IH +++ D F+ LL + F H LF N+ + +I+G++
Sbjct: 32 IHASLIRHDLHHDTFLINLLL---KRTLFFRQNHYSFLLFSHTQFPNIFLYDTLINGFVN 88
Query: 275 FGRFFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFV 454
F E + +F+ L FT VL AC++ + + G +H V + G +V
Sbjct: 89 NHLFHETLGLFLSTRKHGLSLHGFTFPFVLKACTRSQNLKLGIDLHSLVVKCGFSHDVCA 148
Query: 455 ATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKV 634
TSL+ +YS G ++ A +FDE+PE+ VV+W+A + GY S G +EA++LF +M V
Sbjct: 149 MTSLLSVYSGSGRLDDAHKLFDEIPERSVVSWTAFVSGYISAGKHREAIDLFREMVEMGV 208
Query: 635 KPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWE 814
+PD + +V VL+AC R+G L+ + + +LVE+ N + T L+++YAK G M +A
Sbjct: 209 RPDSYLIVRVLTACVRVGDLDSAEWIDKLVEEIGMPKNCFVCTTLVNLYAKRGKMEKARS 268
Query: 815 LFKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGL 994
+F M E+D+V W+ +I G A N + LF QM + PD + +G L +C G
Sbjct: 269 VFDSMAEKDIVTWSTMIQGYASNSLPKEGVELFLQMLRENLKPDQYSIVGFLSSCASLGA 328
Query: 995 VDEG 1006
+D G
Sbjct: 329 LDLG 332
Score = 147 bits (372), Expect = 5e-33
Identities = 88/298 (29%), Positives = 156/298 (52%), Gaps = 11/298 (3%)
Frame = +2
Query: 11 MRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGF 190
M + G+ P+++ VL AC R+ D+ I V + G + FV T+L+ LYAK G
Sbjct: 203 MVEMGVRPDSYLIVRVLTACVRVGDLDSAEWIDKLVEEIGMPKNCFVCTTLVNLYAKRGK 262
Query: 191 LEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSA 370
+E A +FD + E+++V+W+ +I GY E V++F++++ LKPD +++V LS+
Sbjct: 263 MEKARSVFDSMAEKDIVTWSTMIQGYASNSLPKEGVELFLQMLRENLKPDQYSIVGFLSS 322
Query: 371 CSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTW 550
C+ LG + GE ++ N+ + +L+DMY+K G+M + VF +M E+D V
Sbjct: 323 CASLGALDLGEWGSSLIDRHEFLNNLVMGNALIDMYAKCGAMARGFQVFKDMKERDRVIM 382
Query: 551 SAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVG--------- 703
+ I G A NG K + +F Q ++ + PD +T + +L C G ++ G
Sbjct: 383 NTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNAMSC 442
Query: 704 -DSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKER-DLVVWNAVISG 871
S+ R VE ++D++ + G + A+ L M + + ++W A++SG
Sbjct: 443 IYSLKRTVEHY---------GCMVDLWGRAGLLGDAYRLICDMPMKPNAIIWGALLSG 491
>ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing protein
At3g08820 gi|6403507|gb|AAF07847.1|AC010871_23 unknown
protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein;
90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 401 bits (1031), Expect = e-109
Identities = 192/346 (55%), Positives = 260/346 (75%)
Frame = +2
Query: 11 MRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGF 190
+RK GL+ + FTFP VLKAC R S +LG+ +H+ VVK GF DV TSLL +Y+ G
Sbjct: 102 IRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGR 161
Query: 191 LEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSA 370
L DAH+LFDEIP+R+VV+WTA+ SGY GR EA+D+F ++V++ +KPDS+ +V+VLSA
Sbjct: 162 LNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSA 221
Query: 371 CSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTW 550
C +GD + GE I +Y+EE M +N FV T+LV++Y+K G MEKARSVFD M EKD+VTW
Sbjct: 222 CVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTW 281
Query: 551 SAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEK 730
S MI GYASN PKE +ELF QM +E +KPD F++V LS+C+ LG L++G+ L+++
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR 341
Query: 731 NEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGL 910
+EFL N + ALIDMYAKCG+M + +E+FK MKE+D+V+ NA ISGLA NGHV+ +F +
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 911 FAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSLK 1048
F Q EKLG PDG+TF+GLLC CVHAGL+ +G +F+++ Y+LK
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Score = 184 bits (468), Expect = 4e-44
Identities = 99/301 (32%), Positives = 166/301 (55%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGR 283
I+ H+ F +++ +K +L K +L +H F N+ + ++I+G++
Sbjct: 37 INHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFP-----NIFLYNSLINGFVNNHL 91
Query: 284 FFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVATS 463
F E +D+F+ + L FT VL AC++ ++ G +H V + G +V TS
Sbjct: 92 FHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTS 151
Query: 464 LVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPD 643
L+ +YS G + A +FDE+P++ VVTW+A+ GY ++G +EA++LF +M VKPD
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211
Query: 644 CFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFK 823
+ +V VLSAC +G L+ G+ + + +E+ E N + T L+++YAKCG M +A +F
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 824 GMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDE 1003
M E+D+V W+ +I G A N + LF QM + PD + +G L +C G +D
Sbjct: 272 SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDL 331
Query: 1004 G 1006
G
Sbjct: 332 G 332
Score = 94.7 bits (234), Expect = 6e-17
Identities = 55/202 (27%), Positives = 101/202 (50%)
Frame = +2
Query: 401 ESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASN 580
+ IH + + + F+ L+ F + + +F ++ ++++I G+ +N
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 581 GLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLG 760
L E L+LF +++ + FT VL AC+R + ++G + LV K F +
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 761 TALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTP 940
T+L+ +Y+ G + A +LF + +R +V W A+ SG +G + A LF +M ++G
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 941 PDGNTFIGLLCACVHAGLVDEG 1006
PD + +L ACVH G +D G
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSG 231
>ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330538|gb|EFH60957.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 685
Score = 392 bits (1007), Expect = e-106
Identities = 187/346 (54%), Positives = 259/346 (74%)
Frame = +2
Query: 11 MRKEGLFPNNFTFPFVLKACARLSDVQLGVRIHTHVVKAGFELDVFVKTSLLCLYAKCGF 190
+RK GL + FTFP VLKAC R S+ +LG+ +H+ VVK GF DV TSLL +Y+ G
Sbjct: 102 IRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGR 161
Query: 191 LEDAHRLFDEIPERNVVSWTAIISGYIEFGRFFEAVDMFMRLVDVELKPDSFTLVRVLSA 370
L DAH++F+EIPER+VV+WTA+ SGY G+ EA+D+F ++V++ ++PDS+ +V+VLSA
Sbjct: 162 LNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSA 221
Query: 371 CSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEMPEKDVVTW 550
C +GD + GE I +++EE M +N FV T+LV++Y+K G MEKARSVFD M EKD+VTW
Sbjct: 222 CVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTW 281
Query: 551 SAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGDSVSRLVEK 730
S MI GYASN PKE +E F QM +E +KPD F++V LS+C+ LG L++G+ L+++
Sbjct: 282 STMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR 341
Query: 731 NEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNGHVQAAFGL 910
+EFL N + ALIDMYAKCG+M + +E+FK MKE+D+V+ NA ISGLA NGHV+ +F +
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 911 FAQMEKLGTPPDGNTFIGLLCACVHAGLVDEGRCYFDSMRYAYSLK 1048
F Q EKLG PDG+TF+GLLC CVHAGL+ +G +F+++ Y+LK
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Score = 183 bits (464), Expect = 1e-43
Identities = 99/301 (32%), Positives = 163/301 (54%)
Frame = +2
Query: 104 IHTHVVKAGFELDVFVKTSLLCLYAKCGFLEDAHRLFDEIPERNVVSWTAIISGYIEFGR 283
IH H+ F +++ +K +L FL +H F N+ + +I+G++
Sbjct: 37 IHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFP-----NIFLYNTLINGFVNNHL 91
Query: 284 FFEAVDMFMRLVDVELKPDSFTLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVATS 463
F E +D+F+ + L FT VL AC++ +++ G +H V + G +V TS
Sbjct: 92 FHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTS 151
Query: 464 LVDMYSKFGSMEKARSVFDEMPEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPD 643
L+ +YS G + A VF+E+PE+ VVTW+A+ GY + G +EA++LF +M V+PD
Sbjct: 152 LLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPD 211
Query: 644 CFTMVAVLSACSRLGTLEVGDSVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFK 823
+ +V VLSAC +G L+ G+ + + +E+ E N + T L+++YAKCG M +A +F
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 824 GMKERDLVVWNAVISGLAMNGHVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDE 1003
M E+D+V W+ +I G A N + F QM + PD + +G L +C G +D
Sbjct: 272 SMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDL 331
Query: 1004 G 1006
G
Sbjct: 332 G 332
Score = 94.0 bits (232), Expect = 9e-17
Identities = 59/220 (26%), Positives = 105/220 (47%)
Frame = +2
Query: 347 TLVRVLSACSQLGDQEKGESIHRYVEERGMGRNVFVATSLVDMYSKFGSMEKARSVFDEM 526
TL+ V S + L + +H + + + F+ L+ F + +F
Sbjct: 18 TLISVASTFNHL------KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHT 71
Query: 527 PEKDVVTWSAMIGGYASNGLPKEALELFFQMQREKVKPDCFTMVAVLSACSRLGTLEVGD 706
++ ++ +I G+ +N L E L+LF +++ + FT VL AC+R ++G
Sbjct: 72 QFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGI 131
Query: 707 SVSRLVEKNEFLLNPVLGTALIDMYAKCGSMVQAWELFKGMKERDLVVWNAVISGLAMNG 886
+ LV K F + T+L+ +Y+ G + A ++F+ + ER +V W A+ SG G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAG 191
Query: 887 HVQAAFGLFAQMEKLGTPPDGNTFIGLLCACVHAGLVDEG 1006
+ A LF +M ++G PD + +L ACVH G +D G
Sbjct: 192 KHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSG 231