BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00039563
         (488 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar...   124   8e-39
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...   122   3e-38
ref|XP_004509641.1| PREDICTED: genome polyprotein-like [Cicer ar...   122   4e-38
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...   118   7e-37
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]         118   7e-37
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]         118   7e-37
ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer ar...   120   7e-37
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...   115   8e-36
ref|XP_004499456.1| PREDICTED: uncharacterized protein LOC101503...   115   1e-34
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...   122   2e-34
ref|XP_004511143.1| PREDICTED: genome polyprotein-like [Cicer ar...   114   2e-34
ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer ar...    86   1e-26
ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer ar...    87   1e-26
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    83   3e-25
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...    83   6e-25
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             83   6e-25
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...   117   2e-24
ref|XP_007048493.1| Polyprotein, putative [Theobroma cacao] gi|5...    80   7e-24
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part...    70   2e-23
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...    66   7e-22

>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 803

 Score =  124 bits (312), Expect(2) = 8e-39
 Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486 SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
           ++M+P ILP + W   +  F AA+G+ F  N +T+ +IGI+FFP CI WTK  GSSL ++
Sbjct: 266 TMMNPNILPTEAWVKHAAYFVAADGKTFRTNLMTKERIGIRFFPECIFWTKVIGSSLPNK 325

Query: 306 DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSP-----SDPLQRLKHSTIE 142
           D+++GMDV++A +RL+I P GIKF+ QF+PYS I KL+SLS       +   +L     +
Sbjct: 326 DIVVGMDVYSAANRLQILPTGIKFKRQFKPYSGILKLYSLSEVPAGYEEIKSKLLKLCAD 385

Query: 141 NHLAFAHPFPL 109
           NH  F+HP PL
Sbjct: 386 NHGQFSHPKPL 396



 Score = 61.6 bits (148), Expect(2) = 8e-39
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = -1

Query: 110 LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
           LW N +FFV LPFK NEDINPTKA HPGM P DL L
Sbjct: 396 LWTNKDFFVQLPFKLNEDINPTKATHPGMSPSDLAL 431


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score =  122 bits (307), Expect(2) = 3e-38
 Identities = 60/131 (45%), Positives = 89/131 (67%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            ++M+P ILP + W   +  F AA+G+ F  + +T+ KIGI+FFP CIVWTK  GSSL ++
Sbjct: 1190 TMMNPSILPTEAWVKHAAYFVAADGKTFRTDLMTKEKIGIRFFPECIVWTKVIGSSLPNK 1249

Query: 306  DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSP-----SDPLQRLKHSTIE 142
            D+++GMDV++A +RL+I P GIKF+ +F+PYS I KL+SLS       +   +L     +
Sbjct: 1250 DIVVGMDVYSAANRLQILPTGIKFKREFKPYSGILKLYSLSEVPAGYEEIKSKLLKLCAD 1309

Query: 141  NHLAFAHPFPL 109
            +H  F+HP PL
Sbjct: 1310 SHGQFSHPNPL 1320



 Score = 61.6 bits (148), Expect(2) = 3e-38
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = -1

Query: 110  LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
            LW N +FFV LPFK NEDINPTKA HPGM P DL L
Sbjct: 1320 LWTNKDFFVQLPFKLNEDINPTKATHPGMSPSDLAL 1355


>ref|XP_004509641.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 293

 Score =  122 bits (306), Expect(2) = 4e-38
 Identities = 60/131 (45%), Positives = 88/131 (67%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486 SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
           ++M+P ILP + W   +  F AA+G+ F  + +T+ KIGI+FFP CIVW K  GSSL ++
Sbjct: 8   TMMNPSILPTETWVKHAAYFVAADGKTFRTDLMTKEKIGIRFFPECIVWMKVIGSSLPNK 67

Query: 306 DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSP-----SDPLQRLKHSTIE 142
           D+++GMDV++A +RL+I P GIKF+ +F+PYS I KL+SLS       +   +L     +
Sbjct: 68  DIVVGMDVYSAANRLQILPTGIKFKREFKPYSGILKLYSLSEVLVGYEEIKSKLLKLCAD 127

Query: 141 NHLAFAHPFPL 109
           NH  F+HP PL
Sbjct: 128 NHGQFSHPKPL 138



 Score = 61.6 bits (148), Expect(2) = 4e-38
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = -1

Query: 110 LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
           LW N +FFV LPFK NEDINPTKA HPGM P DL L
Sbjct: 138 LWTNKDFFVQLPFKLNEDINPTKATHPGMSPSDLAL 173


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score =  118 bits (296), Expect(2) = 7e-37
 Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            S+++P ILPPD WT +   F A NG+ F  + IT+  IGI+ FPNC++WTK  GS+L ++
Sbjct: 1189 SMINPHILPPDSWTQSEEHFKAVNGKLFTTSLITKKPIGIQIFPNCVIWTKVIGSTLPNK 1248

Query: 306  DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSPSDP-----LQRLKHSTIE 142
            D+L+G D+   +  L+I PHGI+ ++ F+P++ + KL++LS + P       +L     E
Sbjct: 1249 DILLGFDILHQIKHLQIIPHGIRVKSMFKPFTDVLKLYNLSETPPSYQDVSTKLLSFCPE 1308

Query: 141  NHLAFAHPFPL 109
            +H  F HP PL
Sbjct: 1309 SHSEFTHPNPL 1319



 Score = 61.2 bits (147), Expect(2) = 7e-37
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = -1

Query: 110  LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
            LW+N  FFV LPFK NEDINPTKA HPGM P DL L
Sbjct: 1319 LWKNQSFFVKLPFKLNEDINPTKATHPGMSPSDLLL 1354


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score =  118 bits (296), Expect(2) = 7e-37
 Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            S+++P ILPPD WT +   F A NG+ F  + IT+  IGI+ FPNC++WTK  GS+L ++
Sbjct: 1176 SMINPHILPPDSWTQSEEHFKAVNGKLFTTSLITKKPIGIQIFPNCVIWTKVIGSTLPNK 1235

Query: 306  DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSPSDP-----LQRLKHSTIE 142
            D+L+G D+   +  L+I PHGI+ ++ F+P++ + KL++LS + P       +L     E
Sbjct: 1236 DILLGFDILHQIKHLQIIPHGIRVKSMFKPFTDVLKLYNLSETPPSYQDVSTKLLSFCPE 1295

Query: 141  NHLAFAHPFPL 109
            +H  F HP PL
Sbjct: 1296 SHSEFTHPNPL 1306



 Score = 61.2 bits (147), Expect(2) = 7e-37
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = -1

Query: 110  LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
            LW+N  FFV LPFK NEDINPTKA HPGM P DL L
Sbjct: 1306 LWKNQSFFVKLPFKLNEDINPTKATHPGMSPSDLLL 1341


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score =  118 bits (296), Expect(2) = 7e-37
 Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            S+++P ILPPD WT +   F A NG+ F  + IT+  IGI+ FPNC++WTK  GS+L ++
Sbjct: 1078 SMINPHILPPDSWTQSEEHFKAVNGKLFTTSLITKKPIGIQIFPNCVIWTKVIGSTLPNK 1137

Query: 306  DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSPSDP-----LQRLKHSTIE 142
            D+L+G D+   +  L+I PHGI+ ++ F+P++ + KL++LS + P       +L     E
Sbjct: 1138 DILLGFDILHQIKHLQIIPHGIRVKSMFKPFTDVLKLYNLSETPPSYQDVSTKLLSFCPE 1197

Query: 141  NHLAFAHPFPL 109
            +H  F HP PL
Sbjct: 1198 SHSEFTHPNPL 1208



 Score = 61.2 bits (147), Expect(2) = 7e-37
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = -1

Query: 110  LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
            LW+N  FFV LPFK NEDINPTKA HPGM P DL L
Sbjct: 1208 LWKNQSFFVKLPFKLNEDINPTKATHPGMSPSDLLL 1243


>ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 335

 Score =  120 bits (300), Expect(2) = 7e-37
 Identities = 59/131 (45%), Positives = 87/131 (66%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486 SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
           ++M+P ILP + W      F AA+G+ F  + +T+ KIGI+FFP CIVWTK  GSSL ++
Sbjct: 8   TMMNPSILPAEAWVKHVAYFVAADGKTFRTDLMTKEKIGIRFFPECIVWTKVIGSSLPNK 67

Query: 306 DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSL-----SPSDPLQRLKHSTIE 142
           D+++G+DV++A SRL+I P GIKF+ +F+PYS I +L+SL        +   +L     +
Sbjct: 68  DIVVGIDVYSATSRLQILPTGIKFKREFKPYSGILRLYSLYEVPAGYKEIKSKLLRLCAD 127

Query: 141 NHLAFAHPFPL 109
           NH  F+HP PL
Sbjct: 128 NHGKFSHPKPL 138



 Score = 59.7 bits (143), Expect(2) = 7e-37
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -1

Query: 110 LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
           LW N +FFV LPFK NEDINPTKA HPGM P +L L
Sbjct: 138 LWTNKDFFVQLPFKLNEDINPTKATHPGMSPSNLAL 173


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score =  115 bits (287), Expect(2) = 8e-36
 Identities = 57/131 (43%), Positives = 88/131 (67%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            ++M+P ILP + W      F A +G+ F+   +T+ +IGI+FFP  IVWTK  GSSL ++
Sbjct: 1135 TMMNPSILPTEAWVKHVAYFVAVDGKTFKTYLMTKERIGIRFFPESIVWTKVIGSSLPNK 1194

Query: 306  DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSPSDP-LQRLKHSTI----E 142
            D+++GMDV++A +RL+I P GIK++ +F+PYS+I KL+SLS      + +K   +    +
Sbjct: 1195 DIVVGMDVYSAANRLQILPTGIKYKREFKPYSRILKLYSLSEVPAGYEEIKSKQLKLCAD 1254

Query: 141  NHLAFAHPFPL 109
            NH  F+HP PL
Sbjct: 1255 NHGQFSHPKPL 1265



 Score = 61.2 bits (147), Expect(2) = 8e-36
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -1

Query: 110  LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
            LW N +FF+ LPFK NEDINPTKA HPGM P DL L
Sbjct: 1265 LWTNKDFFIQLPFKLNEDINPTKATHPGMSPSDLAL 1300


>ref|XP_004499456.1| PREDICTED: uncharacterized protein LOC101503858 [Cicer arietinum]
          Length = 1109

 Score =  115 bits (287), Expect(2) = 1e-34
 Identities = 59/131 (45%), Positives = 85/131 (64%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            ++M+P ILP + W      F AA+G+ F+ N +T+ KI I+FF +CIVWTK  GS+L ++
Sbjct: 648  TMMNPSILPLEAWIKHVAYFMAADGKVFKTNMMTKRKIRIRFFHDCIVWTKVIGSNLPNK 707

Query: 306  DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSPSDP-----LQRLKHSTIE 142
            D++IGMDV++A +RL+I P GIKF+  F+PYS   KL+SL+   P       +L     +
Sbjct: 708  DIVIGMDVYSAANRLQILPTGIKFKRDFKPYSGTLKLYSLAIVPPEYEGIKTKLLELCAD 767

Query: 141  NHLAFAHPFPL 109
            NH  F HP PL
Sbjct: 768  NHEEFYHPNPL 778



 Score = 57.4 bits (137), Expect(2) = 1e-34
 Identities = 23/33 (69%), Positives = 26/33 (78%)
 Frame = -1

Query: 110 LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDD 12
           LW+N  FF+ LPFK NED+NPTKA HPGM P D
Sbjct: 778 LWKNKYFFIQLPFKLNEDVNPTKATHPGMSPSD 810


>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score =  122 bits (307), Expect(2) = 2e-34
 Identities = 59/131 (45%), Positives = 90/131 (68%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            ++M+P ILP + W   +  F AA+G+ F+ + +T+ KIGI+FFP CIVWTK  GSSL ++
Sbjct: 630  TMMNPSILPTEAWAKHAAYFVAADGKTFKTDLMTKEKIGIRFFPECIVWTKVIGSSLPNK 689

Query: 306  DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSP-----SDPLQRLKHSTIE 142
            D+++GMDV++A ++L+I P GIK++ +F+PYS I KL+SLS       +   +L     +
Sbjct: 690  DIVVGMDVYSAANKLQILPTGIKYKREFKPYSGILKLYSLSEVPFGYEEIKSKLLKLCAD 749

Query: 141  NHLAFAHPFPL 109
            NH  F+HP PL
Sbjct: 750  NHGEFSHPRPL 760



 Score = 48.9 bits (115), Expect(2) = 2e-34
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = -1

Query: 110 LWQNPEFFVTLPFKKNEDINPTKAIHPGM 24
           LW N ++FV LPFK NEDINPTKA  PGM
Sbjct: 760 LWTNKDYFVQLPFKLNEDINPTKATLPGM 788


>ref|XP_004511143.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 257

 Score =  114 bits (285), Expect(2) = 2e-34
 Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486 SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
           ++M+P ILP + W   +  F  A+G+ F    +T+ KIGI FFP CIVW K  GSSL ++
Sbjct: 8   TMMNPSILPTEAWVEHAAYFVTADGKTFRTYLMTKEKIGISFFPECIVWAKVIGSSLPNK 67

Query: 306 DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSP-----SDPLQRLKHSTIE 142
           D+ +GMD+++A +RL+I P  IKF+ +F+PYS I KL+SLS       +   +L     +
Sbjct: 68  DIFVGMDMYSAANRLQILPTRIKFKRKFKPYSGILKLYSLSEVPAGYEEIKSKLLKLCAD 127

Query: 141 NHLAFAHPFPL 109
           NH  F+HP PL
Sbjct: 128 NHGKFSHPKPL 138



 Score = 57.4 bits (137), Expect(2) = 2e-34
 Identities = 25/36 (69%), Positives = 26/36 (72%)
 Frame = -1

Query: 110 LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
           LW N +FFV LPFK NEDINP KA HPG  P DL L
Sbjct: 138 LWTNKDFFVQLPFKLNEDINPVKATHPGTSPSDLAL 173


>ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 441

 Score = 86.3 bits (212), Expect(2) = 1e-26
 Identities = 43/96 (44%), Positives = 65/96 (67%), Gaps = 5/96 (5%)
 Frame = -3

Query: 390 ITRHKIGIKFFPNCIVWTKCYGSSLLDRDLLIGMDVFTAVSRLRITPHGIKFRTQFQPYS 211
           +T+ KIGI+ FP CIVWTK  GSSL ++D+++GMDV++A + L+I P GIKF+ +F+PYS
Sbjct: 1   MTKEKIGIRLFPECIVWTKVIGSSLPNKDIVMGMDVYSAANMLQILPTGIKFKQEFKPYS 60

Query: 210 QIPKLFSL-SPSDPLQRLKHSTIE----NHLAFAHP 118
            I KL+ L       + +K   ++    +H  F+HP
Sbjct: 61  GILKLYFLFKVLAEYEEIKFKLLKLCANSHEKFSHP 96



 Score = 59.3 bits (142), Expect(2) = 1e-26
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -1

Query: 110 LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
           LW+N +FFV LPFK NEDINPTKA HP M P DL L
Sbjct: 99  LWKNKDFFVQLPFKLNEDINPTKATHPRMSPSDLAL 134


>ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 415

 Score = 87.4 bits (215), Expect(2) = 1e-26
 Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
 Frame = -3

Query: 486 SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
           ++++  IL    W      F AA+G+ F    + + KIGI+FF   IVWTK  GSSL ++
Sbjct: 77  TMINSSILSTKAWVKHVAYFVAADGKAFRTYVMKKEKIGIRFFFG-IVWTKVIGSSLPNK 135

Query: 306 DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSL-----SPSDPLQRLKHSTIE 142
           D+++GMDV++A + L+I P  IKF+ +F+PYS I KL+S+        +   +L     +
Sbjct: 136 DIVVGMDVYSAANMLQIIPTVIKFKQKFKPYSGILKLYSIYEVPAKYEENKFKLLKLCAD 195

Query: 141 NHLAFAHPFPL 109
           +H  F+HP PL
Sbjct: 196 SHEKFSHPKPL 206



 Score = 58.2 bits (139), Expect(2) = 1e-26
 Identities = 26/36 (72%), Positives = 27/36 (75%)
 Frame = -1

Query: 110 LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
           LW N +FFV L FK NEDINPTKA HPGM P DL L
Sbjct: 206 LWTNKDFFVQLHFKLNEDINPTKATHPGMSPSDLAL 241


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score = 82.8 bits (203), Expect(2) = 3e-25
 Identities = 48/119 (40%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            SIMDP ILP + W      F  A+         T+H I I+FFP     TK  GS +  +
Sbjct: 1232 SIMDPAILPSEYWIPHFRHFGTADDGILTTTVKTKHPITIEFFPGFKYTTKLLGSDIPGK 1291

Query: 306  DLLIGMDVFTAVS-RLRITPHGIKFRTQFQPYSQIPKLFSLSPSDPLQRLKHSTIENHL 133
            DLLIG D++  ++ +LRI   GI+++ QF+ Y++IP+LF L+ S+ LQ+L+   I+N L
Sbjct: 1292 DLLIGFDIYRQLNNKLRIGADGIRWKNQFKRYTEIPRLFQLTTSNELQQLE-DVIKNQL 1349



 Score = 58.2 bits (139), Expect(2) = 3e-25
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = -1

Query: 110  LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
            LW N +FF+ LPFKKNE+INPTKA H GM P+ LQL
Sbjct: 1365 LWLNQDFFIQLPFKKNENINPTKASHSGMNPEHLQL 1400


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score = 82.8 bits (203), Expect(2) = 6e-25
 Identities = 48/119 (40%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            SIMDP ILP + W      F  A+         T+H I I+FFP     TK  GS +  +
Sbjct: 1233 SIMDPAILPSEYWIPHFRHFGTADDGILTTTVKTKHPITIEFFPGFKYTTKLLGSDIPGK 1292

Query: 306  DLLIGMDVFTAVS-RLRITPHGIKFRTQFQPYSQIPKLFSLSPSDPLQRLKHSTIENHL 133
            DLLIG D++  ++ +LRI   GI+++ QF+ Y++IP+LF L+ S+ LQ+L+   I+N L
Sbjct: 1293 DLLIGFDIYRQLNNKLRIGADGIRWKNQFKRYTEIPRLFQLTTSNELQQLE-DVIKNQL 1350



 Score = 57.0 bits (136), Expect(2) = 6e-25
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -1

Query: 110  LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
            LW N +FF+ LPFK+NE+INPTKA H GM P+ LQL
Sbjct: 1366 LWLNQDFFIQLPFKRNENINPTKASHSGMNPEHLQL 1401


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 82.8 bits (203), Expect(2) = 6e-25
 Identities = 48/119 (40%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            SIMDP ILP + W      F  A+         T+H I I+FFP     TK  GS +  +
Sbjct: 1233 SIMDPAILPSEYWIPHFRHFGTADDGILTTTVKTKHPITIEFFPGFKYTTKLLGSDIPGK 1292

Query: 306  DLLIGMDVFTAVS-RLRITPHGIKFRTQFQPYSQIPKLFSLSPSDPLQRLKHSTIENHL 133
            DLLIG D++  ++ +LRI   GI+++ QF+ Y++IP+LF L+ S+ LQ+L+   I+N L
Sbjct: 1293 DLLIGFDIYRQLNNKLRIGADGIRWKNQFKRYTEIPRLFQLTTSNELQQLE-DVIKNQL 1350



 Score = 57.0 bits (136), Expect(2) = 6e-25
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -1

Query: 110  LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
            LW N +FF+ LPFK+NE+INPTKA H GM P+ LQL
Sbjct: 1366 LWLNQDFFIQLPFKRNENINPTKASHSGMNPEHLQL 1401


>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score =  117 bits (292), Expect = 2e-24
 Identities = 53/101 (52%), Positives = 77/101 (76%)
 Frame = -3

Query: 486 SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
           ++M+P ILP + W   +  F AA+G+ F  + +T+ KIGI+FFP CIVWTK  GSSL ++
Sbjct: 349 TMMNPSILPTEAWVKHAAYFVAADGKTFRTDLMTKEKIGIRFFPECIVWTKVIGSSLPNK 408

Query: 306 DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLS 184
           D+++GMDV++A +RL+I P GIKF+ +F+PYS I KL+SLS
Sbjct: 409 DIVVGMDVYSAANRLQILPTGIKFKREFKPYSGILKLYSLS 449



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = -1

Query: 110 LWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
           LW N +FFV LPFK NEDINPTKA HPGM P DL L
Sbjct: 530 LWTNKDFFVQLPFKLNEDINPTKATHPGMSPSDLAL 565


>ref|XP_007048493.1| Polyprotein, putative [Theobroma cacao] gi|508700754|gb|EOX92650.1|
           Polyprotein, putative [Theobroma cacao]
          Length = 220

 Score = 80.5 bits (197), Expect(2) = 7e-24
 Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
 Frame = -3

Query: 486 SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
           ++++PKILP   W      F  A+ + F  + I++  I I+ FP C + T+  GS LL +
Sbjct: 30  TVINPKILPEKFWIPFDRHFKTASDQTFTAHLISK-PITIQIFPQCSITTQVLGSELLGK 88

Query: 306 DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSPSDPLQRLKHSTI------ 145
           D+++G D++     LRI P+GI+++  F+P+  IPK++S    D   +L   T+      
Sbjct: 89  DIVVGFDIYHQSQHLRILPNGIRYKYSFKPFVPIPKIYSFHQPDEQVQLIVETLRQKACA 148

Query: 144 ENHLAFAH 121
            +HL F H
Sbjct: 149 NSHLEFLH 156



 Score = 55.8 bits (133), Expect(2) = 7e-24
 Identities = 25/35 (71%), Positives = 26/35 (74%)
 Frame = -1

Query: 107 WQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
           W+NPEFFV LPFK NEDINPTKA   GM PD   L
Sbjct: 163 WKNPEFFVKLPFKHNEDINPTKATPSGMNPDHQNL 197


>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
            gi|557110784|gb|ESQ51075.1| hypothetical protein
            EUTSA_v10023188mg, partial [Eutrema salsugineum]
          Length = 1101

 Score = 70.5 bits (171), Expect(2) = 2e-23
 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            SI+ P ILP   W   SV F AANG+ F I+ I +  I I+ FP  +V +K YGS L  +
Sbjct: 681  SIIKPDILPSTHWDRCSVAFKAANGQIFHISLINK-PIHIQLFPGYMVKSKVYGSDLPGK 739

Query: 306  DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSPSDPLQR--LKHSTIENHL 133
            D ++G D+  ++  +   P G+K +    P++ I   + +   +P++    K S   +H 
Sbjct: 740  DFILGFDILHSLKIVSWHPKGLKHKNHLLPWTTISHFYPMELLNPIKEEITKTSCASSHS 799

Query: 132  AF 127
             F
Sbjct: 800  EF 801



 Score = 63.9 bits (154), Expect(2) = 2e-23
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -1

Query: 116 SLLWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
           S LW+NP+FF++LPFKKNEDINPTKA HPGM P+   L
Sbjct: 807 SPLWKNPDFFISLPFKKNEDINPTKASHPGMNPNHYTL 844


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score = 65.9 bits (159), Expect(2) = 7e-22
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
 Frame = -3

Query: 486  SIMDPKILPPDQWTYTSVTFHAANGEPFEINQITRHKIGIKFFPNCIVWTKCYGSSLLDR 307
            SI+ P ILP   W   SV F AAN + F I+ I++  I I+ FP  +V +K YGS L  +
Sbjct: 1084 SIIKPDILPSTHWDQCSVAFKAANRQIFHISLISK-PIHIQLFPGYMVKSKVYGSDLPGK 1142

Query: 306  DLLIGMDVFTAVSRLRITPHGIKFRTQFQPYSQIPKLFSLSPSDPLQR--LKHSTIENHL 133
            D ++G ++  ++ R+   P  +K +    P++ I   + +   +P++    K S   +H 
Sbjct: 1143 DFILGFNILHSLKRVSWHPKCLKHKNHLLPWTTISHFYPMELLNPIKEEITKTSCASSHS 1202

Query: 132  AF 127
             F
Sbjct: 1203 EF 1204



 Score = 63.5 bits (153), Expect(2) = 7e-22
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = -1

Query: 116  SLLWQNPEFFVTLPFKKNEDINPTKAIHPGMPPDDLQL 3
            S LWQNP+FF++LPFKKNEDINPTKA H GM PD   L
Sbjct: 1210 SPLWQNPDFFISLPFKKNEDINPTKASHLGMNPDHYTL 1247