BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00039550
         (462 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]   104   9e-38
emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]   123   3e-26
gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wal...   110   2e-22
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle...   110   2e-22
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle...   109   5e-22
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle...   109   5e-22
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle...   108   6e-22
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...   108   6e-22
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   108   6e-22
gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis c...   108   8e-22
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...   108   8e-22
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   108   1e-21
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             108   1e-21
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle...   107   2e-21
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle...   107   2e-21
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   107   2e-21
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   107   2e-21
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         107   2e-21
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   107   2e-21
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]      107   2e-21

>emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]
          Length = 1202

 Score =  104 bits (260), Expect(2) = 9e-38
 Identities = 51/73 (69%), Positives = 57/73 (78%)
 Frame = -3

Query: 223  EEWFKKCPYEHTLYIKEGKDIGLPIVCLYVDDLIFTSNNGLMCDIFKNSMMKEFEMTNMG 44
            EE F KCPYEHTLY K G D  + IVCLYVDDLI+TSNN  M   FK SMMKEF+MT+MG
Sbjct: 848  EEGFIKCPYEHTLYTKYGVDKKILIVCLYVDDLIYTSNNKTMLADFKKSMMKEFDMTDMG 907

Query: 43   FLHFFLGIEVKQS 5
             +H+FLGIEV QS
Sbjct: 908  LMHYFLGIEVVQS 920



 Score = 78.2 bits (191), Expect(2) = 9e-38
 Identities = 36/56 (64%), Positives = 45/56 (80%)
 Frame = -1

Query: 381 FPNGVLEEEVYVEQPLGYVTKGEEMKVCQLKKALYGLKKAPRAWYTRIDHYFLKNG 214
           F +G LEEEVY++QP GYV +G E +  +LKKALYGLK+APRAWY+RID YF + G
Sbjct: 795 FLHGELEEEVYIDQPPGYVKQGYENQXYKLKKALYGLKQAPRAWYSRIDAYFTEEG 850


>emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
          Length = 1278

 Score =  123 bits (308), Expect = 3e-26
 Identities = 70/152 (46%), Positives = 90/152 (59%)
 Frame = -3

Query: 460  LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
            L+TI LVL++AAQ+ WSIHQ+D K AF                   +   N+    K++ 
Sbjct: 843  LDTIXLVLSMAAQNSWSIHQLDVKSAFLHGXLEEEVYIDQPPGYVKQGYENQVYKLKKAL 902

Query: 280  LWPQKSSSSLVHSD*PLLLEEWFKKCPYEHTLYIKEGKDIGLPIVCLYVDDLIFTSNNGL 101
               +++  +         +EE F KCPYEHTLY K G D  + IVCLYVDDLI+TSNN  
Sbjct: 903  YGLKQAPRAWYSRIDAYFIEEGFIKCPYEHTLYTKYGVDKKILIVCLYVDDLIYTSNNKT 962

Query: 100  MCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQS 5
            M   FK SMMK F+MT+MG +H+FLGIEV QS
Sbjct: 963  MLADFKKSMMKXFDMTDMGLMHYFLGIEVVQS 994


>gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wallichii]
          Length = 315

 Score =  110 bits (276), Expect = 2e-22
 Identities = 68/156 (43%), Positives = 92/156 (58%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   + T
Sbjct: 86  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKT 144

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
           L+  K +    ++     ++++FK     KCPYEH LYIK   +  L I CLYVDDLIFT
Sbjct: 145 LYGLKQAPRAWNTR----IDKYFKEKKFIKCPYEHALYIKIQNN-DLLIACLYVDDLIFT 199

Query: 115 SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
            NN  M ++FK  M KEFEMT++GF+ ++LGIEVKQ
Sbjct: 200 GNNPNMFELFKMEMTKEFEMTDIGFMSYYLGIEVKQ 235


>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  110 bits (276), Expect = 2e-22
 Identities = 68/156 (43%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL++ LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 86  LETVRLIILLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKA 144

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
           L+  K +    ++     ++++FK     KCPYEH LYIK  KD G+ I CLYVDDLIFT
Sbjct: 145 LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKD-GILIACLYVDDLIFT 199

Query: 115 SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
            NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 200 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235


>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  109 bits (272), Expect = 5e-22
 Identities = 65/151 (43%), Positives = 87/151 (57%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                   +   N+ +  K++ 
Sbjct: 86  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLKKAL 145

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFKKCPYEHTLYIKEGKDIGLPIVCLYVDDLIFTSNNGL 101
              +++  +          E+ F KCPYEH LYIK  KD  + I CLYVDDLIFT NN  
Sbjct: 146 YGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKD-DILIACLYVDDLIFTGNNPS 204

Query: 100 MCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
           M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 205 MFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235


>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  109 bits (272), Expect = 5e-22
 Identities = 65/151 (43%), Positives = 87/151 (57%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                   +   N+ +  K++ 
Sbjct: 86  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDFEEEVYIEQPQGYIVKGEENKVLRLKKAL 145

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFKKCPYEHTLYIKEGKDIGLPIVCLYVDDLIFTSNNGL 101
              +++  +          E+ F KCPYEH LYIK  KD  + I CLYVDDLIFT NN  
Sbjct: 146 YGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKD-DILIACLYVDDLIFTGNNPS 204

Query: 100 MCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
           M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 205 MFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235


>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  108 bits (271), Expect = 6e-22
 Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 86  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKA 144

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
           L+  K +    ++     ++++FK     KCPYEH LYIK  KD  + I CLYVDDLIFT
Sbjct: 145 LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKD-DILIACLYVDDLIFT 199

Query: 115 SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
            NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 200 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  108 bits (271), Expect = 6e-22
 Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 86  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKA 144

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
           L+  K +    ++     ++++FK     KCPYEH LYIK  KD  + I CLYVDDLIFT
Sbjct: 145 LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKD-DILIACLYVDDLIFT 199

Query: 115 SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
            NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 200 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  108 bits (271), Expect = 6e-22
 Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 86  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKA 144

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
           L+  K +    ++     ++++FK     KCPYEH LYIK  KD  + I CLYVDDLIFT
Sbjct: 145 LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKD-DILIACLYVDDLIFT 199

Query: 115 SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
            NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 200 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235


>gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score =  108 bits (270), Expect = 8e-22
 Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                    +G    V   +  
Sbjct: 86  LETVRLIISLAAQNVWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEAKVLKLKKA 144

Query: 280 LWPQKSSSSLVHSD*PLLLEEW-FKKCPYEHTLYIKEGKDIGLPIVCLYVDDLIFTSNNG 104
           L+  K +    ++      +E  F KCPYEH LYIK  KD  + I CLYVDDLIFT NN 
Sbjct: 145 LYGLKQAPRAWNTRIDKYFKEQDFIKCPYEHALYIKIQKD-DILIACLYVDDLIFTGNNP 203

Query: 103 LMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
            M + FK  M KEFEMT++G ++++LGIEVKQ
Sbjct: 204 SMFEEFKKEMTKEFEMTDIGLMYYYLGIEVKQ 235


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  108 bits (270), Expect = 8e-22
 Identities = 65/151 (43%), Positives = 87/151 (57%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                   +   ++ +  K++ 
Sbjct: 86  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKAL 145

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFKKCPYEHTLYIKEGKDIGLPIVCLYVDDLIFTSNNGL 101
              +++  S          E+ F KCPYEH LYIK  KD  + I CLYVDDLIFT NN  
Sbjct: 146 YGLKQAPRSWNTRIDKYFKEKDFIKCPYEHALYIKIQKD-DILIACLYVDDLIFTGNNPS 204

Query: 100 MCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
           M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 205 MFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  108 bits (269), Expect = 1e-21
 Identities = 67/156 (42%), Positives = 89/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 86  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKA 144

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFKK-----CPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
           L+  K +    ++     + ++FKK     CPYEH LYIK  KD  + I CLYVDDLIFT
Sbjct: 145 LYGLKQAPRAWNTR----INKYFKKKDFIKCPYEHALYIKIQKD-DILIACLYVDDLIFT 199

Query: 115 SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
            NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 200 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  108 bits (269), Expect = 1e-21
 Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460  LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
            LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 864  LETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQGYI-VKGEEDKVLRLKKA 922

Query: 280  LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
            L+  K +    ++     ++++FK     KCPYEH LYIK  K+  + I CLYVDDLIFT
Sbjct: 923  LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKE-DILIACLYVDDLIFT 977

Query: 115  SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
             NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 978  GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 1013


>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  107 bits (267), Expect = 2e-21
 Identities = 66/156 (42%), Positives = 89/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K  F                    +G  + V   +  
Sbjct: 86  LETVRLIISLAAQNKWKIHQMDVKSTFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKA 144

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
           L+  K +    ++     ++++FK     KCPYEH LYIK  KD  + I CLYVDDLIFT
Sbjct: 145 LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKD-DILIACLYVDDLIFT 199

Query: 115 SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
            NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 200 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235


>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  107 bits (267), Expect = 2e-21
 Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 86  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKA 144

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
           L+  K +    ++     ++++FK     KCPYEH LYIK  KD  + I CLYVDDLIFT
Sbjct: 145 LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKD-DILIACLYVDDLIFT 199

Query: 115 SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
            NN  + + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 200 GNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  107 bits (267), Expect = 2e-21
 Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460  LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
            LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 925  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKA 983

Query: 280  LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
            L+  K +    ++     ++++FK     KCPYEH LYIK  K+  + I CLYVDDLIFT
Sbjct: 984  LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKE-DILIACLYVDDLIFT 1038

Query: 115  SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
             NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 1039 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 1074


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  107 bits (267), Expect = 2e-21
 Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460  LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
            LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 893  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKA 951

Query: 280  LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
            L+  K +    ++     ++++FK     KCPYEH LYIK  K+  + I CLYVDDLIFT
Sbjct: 952  LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKE-DILIACLYVDDLIFT 1006

Query: 115  SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
             NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 1007 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 1042


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  107 bits (267), Expect = 2e-21
 Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 422 LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKV 480

Query: 280 LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
           L+  K +    ++     ++++FK     KCPYEH LYIK  K+  + I CLYVDDLIFT
Sbjct: 481 LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKE-DILIACLYVDDLIFT 535

Query: 115 SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
            NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 536 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 571


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  107 bits (267), Expect = 2e-21
 Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = -3

Query: 460  LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
            LET+RL+++LAAQ+ W IHQMD K AF                    +G  + V   +  
Sbjct: 925  LETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKV 983

Query: 280  LWPQKSSSSLVHSD*PLLLEEWFK-----KCPYEHTLYIKEGKDIGLPIVCLYVDDLIFT 116
            L+  K +    ++     ++++FK     KCPYEH LYIK  K+  + I CLYVDDLIFT
Sbjct: 984  LYGLKQAPRAWNTR----IDKYFKEKDFIKCPYEHALYIKIQKE-DILIACLYVDDLIFT 1038

Query: 115  SNNGLMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
             NN  M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 1039 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 1074


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  107 bits (266), Expect = 2e-21
 Identities = 65/152 (42%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
 Frame = -3

Query: 460 LETIRLVLALAAQHGWSIHQMDDKFAFSEWSS*RGGLC*TTSWLCHERGRNESVSTKEST 281
           LET+RL+++LAAQ  W IHQMD K AF                    +G  + V   +  
Sbjct: 86  LETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYI-VKGEEDKVLRLKKA 144

Query: 280 LWPQKSSSSLVHSD*PLLL-EEWFKKCPYEHTLYIKEGKDIGLPIVCLYVDDLIFTSNNG 104
           L+  K +    ++       E+ F KCPYEH LYIK   +  + I CLYVDDLIFT NN 
Sbjct: 145 LYGLKQAPRAWNTRIDKYFNEKGFIKCPYEHALYIKTQNN-DILIACLYVDDLIFTGNNP 203

Query: 103 LMCDIFKNSMMKEFEMTNMGFLHFFLGIEVKQ 8
           +M + FK  M KEFEMT++G + ++LGIEVKQ
Sbjct: 204 IMFEDFKKEMTKEFEMTDIGLMSYYLGIEVKQ 235