BLASTX nr result
ID: Cocculus23_contig00039512
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00039512
(973 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 76 3e-28
ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Popu... 61 1e-20
ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Popu... 60 5e-20
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar... 69 4e-19
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 76 1e-17
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 76 1e-17
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 75 1e-17
ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutr... 52 3e-15
ref|XP_006408743.1| hypothetical protein EUTSA_v10002230mg [Eutr... 53 1e-13
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar... 77 1e-11
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 51 1e-11
ref|XP_004489151.1| PREDICTED: capsid protein-like [Cicer arieti... 54 1e-11
ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, part... 53 3e-11
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 43 4e-11
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 43 4e-11
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 43 1e-10
ref|XP_006405193.1| hypothetical protein EUTSA_v10000496mg [Eutr... 52 3e-10
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar... 69 4e-09
ref|XP_003608874.1| hypothetical protein MTR_4g103910 [Medicago ... 62 4e-09
ref|XP_006478656.1| PREDICTED: uncharacterized protein LOC102627... 67 1e-08
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 75.9 bits (185), Expect(3) = 3e-28
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Frame = +1
Query: 127 SDLDPAPWFTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDAEVLKEFTTRFTGTLKDWI 306
S ++ PWFTLD++P W E GAW+DT KT ++++EF R TGTLK+W
Sbjct: 804 SKINSGPWFTLDDIPPSLWRKRLLEFGAWLDTQMMKTGADTYKIIEEFCCRMTGTLKEWY 863
Query: 307 YSPW*LSQ---------TPALCCRHSNFLGSISY*IPWRFFTQ*S*IQTGILHYEMLFLN 459
++ L Q L H+ F+G + F + + + L
Sbjct: 864 HNLGPLKQDELHRLVNTAAVLGILHNEFIGDM------EIFDRKN--RQEFFEMRCCSLK 915
Query: 460 KKDLDRHYQRMLRRYH 507
KDL+RHYQRM +RY+
Sbjct: 916 VKDLERHYQRMTQRYY 931
Score = 54.7 bits (130), Expect(3) = 3e-28
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = +3
Query: 609 LSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDCHCFPRKS 788
LSLG+I+Q L A++K+C ++ F ++ KF ACKK L I CKD K C C RK
Sbjct: 971 LSLGQIHQIALEALEKLCTLHQHFSEIVQQKSKFIKACKKPYLEIKCKD-KICSCTTRKK 1029
Query: 789 H 791
H
Sbjct: 1030 H 1030
Score = 42.7 bits (99), Expect(3) = 3e-28
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 878 QGRRKND*CFNCGQKGHFGKKCPRKPVRGQRL 973
+G+++N CF CG+KGHF K+CP K + +L
Sbjct: 1060 RGKKENQRCFVCGEKGHFSKRCPNKTNKAAKL 1091
>ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Populus trichocarpa]
gi|550326181|gb|ERP54440.1| hypothetical protein
POPTR_0012s01890g [Populus trichocarpa]
Length = 1153
Score = 60.8 bits (146), Expect(3) = 1e-20
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +3
Query: 540 ILSLP--LCQRSFNLSLTTI*AIGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFT 713
+ S+P L +F L T I SLG I+ L A++KICDQ+K F +
Sbjct: 500 LASIPRDLANETFRLFKTRKEVIDNQSLGTIFHQVLEALNKICDQHKYFTKILQPDKTML 559
Query: 714 TACKKDDLLIGCKDKKDCHCFPRKSHRH 797
ACK+ DLLI C D DC+C P K +H
Sbjct: 560 HACKRPDLLIKCSDHADCNC-PLKKTKH 586
Score = 52.8 bits (125), Expect(3) = 1e-20
Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 28/173 (16%)
Frame = +1
Query: 73 PPSPSLDPVPMDE--DQDETSDLDP------------APWFTLDNLPCHKWGAYFEEMGA 210
PP S V +DE D+ L+P +FTLD++P KW E +
Sbjct: 326 PPPTSTTRVSVDEPVSSDDEVPLNPRHYQPHINSSSIGGYFTLDDIPRVKWQDRILEFHS 385
Query: 211 WVDTIQYKTKKSDAEVLKEFTTRFTGTLKDWIYSPW*LSQ---------TPALCCRHSNF 363
W+ + K + + L++F+ +F+GTL DW ++ Q + AL H F
Sbjct: 386 WLTSYMLKDGATLRDALQQFSAKFSGTLWDWFHALGDYRQMQFVNSASLSEALGWLHYEF 445
Query: 364 LGSISY*IPWRFFTQ*S*IQTGILHYEMLFLN-----KKDLDRHYQRMLRRYH 507
LG I YE + + DL+RH++ M +RYH
Sbjct: 446 LGEALN-------------DKEIARYEYFKMKCCSYLRSDLERHFKEMCQRYH 485
Score = 33.5 bits (75), Expect(3) = 1e-20
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 902 CFNCGQKGHFGKKCPRKPVRGQRL 973
CF C +KGHF K CP+K + +L
Sbjct: 623 CFICKRKGHFAKACPQKKAQSLKL 646
>ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Populus trichocarpa]
gi|222860472|gb|EEE98019.1| hypothetical protein
POPTR_0011s07150g [Populus trichocarpa]
Length = 950
Score = 60.5 bits (145), Expect(3) = 5e-20
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +3
Query: 540 ILSLP--LCQRSFNLSLTTI*AIGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFT 713
+ S+P L +F L T I SLG I+ L A++K+CDQ+K F +
Sbjct: 809 LASIPRDLADETFRLFKTRKEVIDNQSLGTIFHQVLEALNKMCDQHKYFTKILQPDKTML 868
Query: 714 TACKKDDLLIGCKDKKDCHCFPRKSHRH 797
ACK+ DLLI C D DC+C P K +H
Sbjct: 869 RACKRPDLLIKCSDNVDCNC-PLKKKKH 895
Score = 55.8 bits (133), Expect(3) = 5e-20
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Frame = +1
Query: 73 PPSPSLDPVPMDE--DQDETSDLDP------------APWFTLDNLPCHKWGAYFEEMGA 210
PP S V +DE D+ +L+P +FTLD++P KW E +
Sbjct: 635 PPPTSTTRVSVDEPVSSDDEVNLNPRHYQPHINSPSIGGYFTLDDIPQVKWRDRILEFHS 694
Query: 211 WVDTIQYKTKKSDAEVLKEFTTRFTGTLKDWIYSPW*LSQ---------TPALCCRHSNF 363
W+ + K + + L++F+ +F+GTL DW ++ Q + AL H F
Sbjct: 695 WLTSYMLKDGATLRDALQQFSAKFSGTLWDWFHALGDYRQMQFVNSASLSEALGWLHYEF 754
Query: 364 LGSISY*IPWRFFTQ*S*IQTGILHYEMLFLN-----KKDLDRHYQRMLRRYH 507
LG I YE + + DL+RH+++M RRYH
Sbjct: 755 LGEALN-------------DKEIARYEYFKMKCCSYLRSDLERHFKKMCRRYH 794
Score = 28.9 bits (63), Expect(3) = 5e-20
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 902 CFNCGQKGHFGKKCPRK 952
CF C +KG F K CP+K
Sbjct: 932 CFICKRKGQFAKTCPQK 948
>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1645
Score = 69.3 bits (168), Expect(2) = 4e-19
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Frame = +1
Query: 148 WFTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDAEVLKEFTTRFTGTLKDWIYSPW*LS 327
WFTLD++P W E G W+DT KT ++++EF R TGTLK+W ++
Sbjct: 791 WFTLDDIPSSLWRKRLLEFGVWLDTQMMKTGADTYKIIEEFCCRMTGTLKEWYHNLGSFK 850
Query: 328 Q---------TPALCCRHSNFLGSISY*IPWRFFTQ*S*IQTGILHYEMLFLNKKDLDRH 480
Q L H+ F+G + F + I+ L KDL RH
Sbjct: 851 QDELNRLMNTAAVLGILHNEFIGDM------EIFDR--KIRQEFFEMRCCSLKVKDLQRH 902
Query: 481 YQRMLRRYH 507
YQRM +RY+
Sbjct: 903 YQRMTQRYY 911
Score = 53.1 bits (126), Expect(2) = 4e-19
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 609 LSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDCHCFP-RK 785
LSLG+I+Q L A++ +C ++ F ++ KFT ACKK L I CKD K C C ++
Sbjct: 951 LSLGQIHQIALEALENLCRLHQHFSEIVQQKSKFTKACKKPYLEIKCKD-KICSCTTIKQ 1009
Query: 786 SHRHPIAFPRKFLPRTTENQKS 851
HR P + + N+ S
Sbjct: 1010 HHRQKYTKPSRIFKKRCPNKTS 1031
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 67.4 bits (163), Expect(2) = 1e-17
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Frame = +3
Query: 600 IGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDCHCFP 779
I +SLG+I+Q +DK+C+Q + FKDL + F +ACKK L I CK KKDC C P
Sbjct: 968 IDNISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKKDCDCSP 1027
Query: 780 RKSHRHPIAFPRKFLPRTTENQK----------SLLDTSRRRS 878
+K +F R ++K S D+ RR+S
Sbjct: 1028 KKKRHFRKFKSPEFSSRPRRSRKPYRFFRKRSSSSKDSKRRKS 1070
Score = 49.7 bits (117), Expect(2) = 1e-17
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Frame = +2
Query: 305 FIPLGDYRRHQ-LYAADIPTFWARFHIEFLGDSSLSDLKYKQEFFTMKCCS*TRRIL--- 472
F LG YR+ Q + ++ + A H +FLGD + + ++++ +MKCCS + L
Sbjct: 863 FDSLGPYRQLQFVQLPEVSSALAILHDQFLGDPAAAFEAARRDYLSMKCCSLDAKDLDFH 922
Query: 473 IGTISVC*GVIMLDGINAHDLKYTFIASLPEIIQPELNNYL 595
+S+ L+G N LK+ F+ASLPE +QP++ L
Sbjct: 923 YKRMSLL--FYKLNGFNEPTLKHVFLASLPEELQPDIQRQL 961
Score = 75.9 bits (185), Expect = 2e-11
Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Frame = +1
Query: 73 PPSPSLDPVPMDEDQDETSDLDPAPWFTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDA 252
P S + + P + + PWFT D++P +KW EM AW+D ++ +
Sbjct: 786 PESSATNQPPPAQTTSSSQKSSNGPWFTYDDIPSYKWRDRLNEMSAWIDLQMLRSGATTE 845
Query: 253 EVLKEFTTRFTGTLKDWI-----YSPW*LSQTP----ALCCRHSNFLGSISY*IPWRFFT 405
VL+EF TRFTG L+DW Y Q P AL H FLG P F
Sbjct: 846 SVLREFATRFTGALRDWFDSLGPYRQLQFVQLPEVSSALAILHDQFLGD-----PAAAFE 900
Query: 406 Q*S*IQTGILHYEMLFLNKKDLDRHYQRM 492
+ L + L+ KDLD HY+RM
Sbjct: 901 A---ARRDYLSMKCCSLDAKDLDFHYKRM 926
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 67.4 bits (163), Expect(2) = 1e-17
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Frame = +3
Query: 600 IGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDCHCFP 779
I +SLG+I+Q +DK+C+Q + FKDL + F +ACKK L I CK KKDC C P
Sbjct: 955 IDNISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKKDCDCSP 1014
Query: 780 RKSHRHPIAFPRKFLPRTTENQK----------SLLDTSRRRS 878
+K +F R ++K S D+ RR+S
Sbjct: 1015 KKKRHFRKFKSPEFSSRPRRSRKPYRFFRKRSSSSKDSKRRKS 1057
Score = 49.7 bits (117), Expect(2) = 1e-17
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Frame = +2
Query: 305 FIPLGDYRRHQ-LYAADIPTFWARFHIEFLGDSSLSDLKYKQEFFTMKCCS*TRRIL--- 472
F LG YR+ Q + ++ + A H +FLGD + + ++++ +MKCCS + L
Sbjct: 850 FDSLGPYRQLQFVQLPEVSSALAILHDQFLGDPAAAFEAARRDYLSMKCCSLDAKDLDFH 909
Query: 473 IGTISVC*GVIMLDGINAHDLKYTFIASLPEIIQPELNNYL 595
+S+ L+G N LK+ F+ASLPE +QP++ L
Sbjct: 910 YKRMSLL--FYKLNGFNEPTLKHVFLASLPEELQPDIQRQL 948
Score = 76.3 bits (186), Expect = 2e-11
Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Frame = +1
Query: 73 PPSPSLDPVPMDEDQDETSDLDPAPWFTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDA 252
P S + + P + + PWFT D++P +KW EM AW+D ++ +
Sbjct: 773 PESSATNQPPPAQTTSSSQKSSNGPWFTFDDIPSYKWRDRLNEMSAWIDLQMLRSGATTE 832
Query: 253 EVLKEFTTRFTGTLKDWI-----YSPW*LSQTP----ALCCRHSNFLGSISY*IPWRFFT 405
VL+EF TRFTG L+DW Y Q P AL H FLG P F
Sbjct: 833 SVLREFATRFTGALRDWFDSLGPYRQLQFVQLPEVSSALAILHDQFLGD-----PAAAFE 887
Query: 406 Q*S*IQTGILHYEMLFLNKKDLDRHYQRM 492
+ L + L+ KDLD HY+RM
Sbjct: 888 A---ARRDYLSMKCCSLDAKDLDFHYKRM 913
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 67.4 bits (163), Expect(2) = 1e-17
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Frame = +3
Query: 600 IGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDCHCFP 779
I +SLG+I+Q +DK+C+Q + FKDL + F +ACKK L I CK KKDC C P
Sbjct: 857 IDNISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKKDCDCSP 916
Query: 780 RKSHRHPIAFPRKFLPRTTENQK----------SLLDTSRRRS 878
+K +F R ++K S D+ RR+S
Sbjct: 917 KKKRHFRKFKSPEFSSRPRRSRKPYRFFRKRSSSSKDSKRRKS 959
Score = 49.7 bits (117), Expect(2) = 1e-17
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Frame = +2
Query: 305 FIPLGDYRRHQ-LYAADIPTFWARFHIEFLGDSSLSDLKYKQEFFTMKCCS*TRRIL--- 472
F LG YR+ Q + ++ + A H +FLGD + + ++++ +MKCCS + L
Sbjct: 752 FDSLGPYRQLQFVQLPEVSSALAILHDQFLGDPAAAFEAARRDYLSMKCCSLDAKDLDFH 811
Query: 473 IGTISVC*GVIMLDGINAHDLKYTFIASLPEIIQPELNNYL 595
+S+ L+G N LK+ F+ASLPE +QP++ L
Sbjct: 812 YKRMSLL--FYKLNGFNEPTLKHVFLASLPEELQPDIQRQL 850
Score = 74.7 bits (182), Expect = 5e-11
Identities = 47/125 (37%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Frame = +1
Query: 145 PWFTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDAEVLKEFTTRFTGTLKDWI-----Y 309
PWFT D+LP +KW EM AW+D ++ + VL+EF TRFTG L+DW Y
Sbjct: 699 PWFTFDDLPSYKWRDRLNEMSAWIDLQMLRSGATTESVLREFATRFTGALRDWFDSLGPY 758
Query: 310 SPW*LSQTP----ALCCRHSNFLGSISY*IPWRFFTQ*S*IQTGILHYEMLFLNKKDLDR 477
Q P AL H FLG P F + L + L+ KDLD
Sbjct: 759 RQLQFVQLPEVSSALAILHDQFLGD-----PAAAFEA---ARRDYLSMKCCSLDAKDLDF 810
Query: 478 HYQRM 492
HY+RM
Sbjct: 811 HYKRM 815
>ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutrema salsugineum]
gi|557099163|gb|ESQ39527.1| hypothetical protein
EUTSA_v10001103mg [Eutrema salsugineum]
Length = 1135
Score = 52.4 bits (124), Expect(3) = 3e-15
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 314 LGDYRRHQLYAADIPTFWARFHIEFLGDSSLSDLKYKQEFFTMKCCS*TRRILIGTIS-V 490
LG+YR+ Q+Y IP H EF+G + + ++EFFT KCCS +R L
Sbjct: 844 LGEYRQQQVYQTTIPLLLGEIHREFIGTPTHLKEQLQEEFFTAKCCSLKKRDLAKHFERQ 903
Query: 491 C*GVIMLDGINAHDLKYTFIASLPEIIQPELNNYL 595
L+G+N LK ++SL + + + Y+
Sbjct: 904 TRRYYALNGLNNPSLKQVHLSSLDDYLSQQTKLYI 938
Score = 45.1 bits (105), Expect(3) = 3e-15
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 600 IGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGC-KDKKDCHCF 776
+ +S+G+I Q +DK+C Q + + + S + + C + DL I C K KK C C
Sbjct: 945 VEDISIGQIQQYVFRTLDKLCKQKEFWMEFMDKSKQLSRICARPDLSIKCLKSKKTCSCD 1004
Query: 777 PR-KSHRHPIAFPRKF 821
R KS R A ++F
Sbjct: 1005 DRSKSRRFRKASHKRF 1020
Score = 31.2 bits (69), Expect(3) = 3e-15
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 887 RKND*CFNCGQKGHFGKKCPRK 952
+K CF C ++GHF K CP K
Sbjct: 1036 KKTTKCFLCRKEGHFAKNCPNK 1057
>ref|XP_006408743.1| hypothetical protein EUTSA_v10002230mg [Eutrema salsugineum]
gi|557109899|gb|ESQ50196.1| hypothetical protein
EUTSA_v10002230mg [Eutrema salsugineum]
Length = 469
Score = 52.8 bits (125), Expect(3) = 1e-13
Identities = 31/80 (38%), Positives = 42/80 (52%)
Frame = +3
Query: 537 NILSLPLCQRSFNLSLTTI*AIGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTT 716
N L PL ++ + + Q SLGEIYQ +L A++K+C+ K FK LQ
Sbjct: 110 NSLPEPLGNKTSRILSLKNMTLNQASLGEIYQISLAALEKLCNHQKFFKQLQEQGKLLGR 169
Query: 717 ACKKDDLLIGCKDKKDCHCF 776
A + DL I CK K+ C CF
Sbjct: 170 AYDRPDLSIKCKAKR-CGCF 188
Score = 37.0 bits (84), Expect(3) = 1e-13
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 878 QGRRKND*CFNCGQKGHFGKKCPRKPVRGQRL 973
+G +K+D C+ C +KGH+ K+CP K R L
Sbjct: 223 RGYKKSDRCYICKKKGHYAKQCPNKKKRDNLL 254
Score = 33.5 bits (75), Expect(3) = 1e-13
Identities = 25/103 (24%), Positives = 44/103 (42%)
Frame = +1
Query: 202 MGAWVDTIQYKTKKSDAEVLKEFTTRFTGTLKDWIYSPW*LSQTPALCCRHSNFLGSISY 381
M AW+ + + V+ + + F G L+ W S L L R S + ++
Sbjct: 1 MNAWLTEQLLNPRATLPTVIDKLISHFHGRLRQWWIS---LRDYRPLQIRQSQSVDTVMG 57
Query: 382 *IPWRFFTQ*S*IQTGILHYEMLFLNKKDLDRHYQRMLRRYHA 510
I +F + + KKDL++HY+RM +R++A
Sbjct: 58 HIHNKFLAR-----EEYMSMRCCSFKKKDLEKHYERMSKRFYA 95
>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1170
Score = 77.0 bits (188), Expect = 1e-11
Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Frame = +1
Query: 127 SDLDPAPWFTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDAEVLKEFTTRFTGTLKDWI 306
S ++ PWFTLD++P W E GAW+DT KT +++EF R TGTLK+W
Sbjct: 244 SKINSEPWFTLDDIPPSMWRKRLLEFGAWLDTQMMKTGADTYNIIEEFCCRMTGTLKEWY 303
Query: 307 YSPW*LSQ---------TPALCCRHSNFLGSISY*IPWRFFTQ*S*IQTGILHYEM--LF 453
++ L Q L HS F+G + F + + YEM
Sbjct: 304 HNLGPLKQDELHRLVNTAAVLGILHSEFIGDM------EIFDR----KNRQEFYEMRCCS 353
Query: 454 LNKKDLDRHYQRMLRRYH 507
L KDL+RHYQRM +RY+
Sbjct: 354 LKVKDLERHYQRMTQRYY 371
Score = 67.4 bits (163), Expect = 8e-09
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 14/213 (6%)
Frame = +2
Query: 377 HIEFLGDSSLSDLKYKQEFFTMKCCS*TRRILIGTIS-VC*GVIMLDGINAHDLKYTFIA 553
H EF+GD + D K +QEF+ M+CCS + L + +L+G N H LK T+I+
Sbjct: 328 HSEFIGDMEIFDRKNRQEFYEMRCCSLKVKDLERHYQRMTQRYYVLNGFNDHSLKNTYIS 387
Query: 554 SLPEIIQPELNNYLGYWST*SWGNLPVYPLSY**NL*PE--QDLQRSSKQFSQIYH---- 715
SLP+ +QPE++ + T + ++ L + E + L R + FS+I
Sbjct: 388 SLPQELQPEIHRMI----TATQKDIKALSLGQIHQITLEALEKLCRLHQHFSEIVQQKSK 443
Query: 716 ---SLQKR*SSYRL*GQEGLPLFSPKVS*ASY----RFSKKISSKDNXXXXXXXXXXXXX 874
+ +K + + L K SY R KK+ +
Sbjct: 444 FIKACKKPYLEIKCKNNKCSCLTRKKHHRKSYIKPPRIFKKVKKRK-----ALKFFKRKP 498
Query: 875 XQGRRKND*CFNCGQKGHFGKKCPRKPVRGQRL 973
+G++++ CF CG+KGHF K+CP K + ++
Sbjct: 499 FRGKKEDQRCFVCGEKGHFSKRCPNKSNKAAKM 531
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
gi|557090298|gb|ESQ31006.1| hypothetical protein
EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 51.2 bits (121), Expect(2) = 1e-11
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +3
Query: 600 IGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDCHC 773
+ Q SLGEIY+ +L A++K+C+ K FK LQ AC + +L I CK K+ C C
Sbjct: 849 LSQASLGEIYKISLAALEKLCNHQKFFKQLQEQGKLLGRACDRPELSIKCKTKR-CGC 905
Score = 45.8 bits (107), Expect(2) = 1e-11
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 8/154 (5%)
Frame = +1
Query: 73 PPSPSLDPVPMDEDQDETSDLDPAPWFTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDA 252
P P P D + S D + DN+P KWG EM AW+ +
Sbjct: 672 PQRPQTPP-----DWNPRSHTDSHSGLSFDNVPSSKWGDKIYEMHAWLTEQLLNPGATLP 726
Query: 253 EVLKEFTTRFTGTLKDWIYSPW*LSQTPALCCRHSNFLGSI------SY*IPWRFFTQ*S 414
V+ + ++F G L+ W S L L R S + ++ + W +T
Sbjct: 727 TVIVKLISKFHGHLRQWWIS---LGDYRQLQIRQSQSVDTVIGHIHNEFFGTWDHYT--- 780
Query: 415 *IQTGILHYEM--LFLNKKDLDRHYQRMLRRYHA 510
IQ + M +KDL++HY+RM +R++A
Sbjct: 781 -IQAREEYMSMRCCSFKRKDLEKHYERMSKRFYA 813
>ref|XP_004489151.1| PREDICTED: capsid protein-like [Cicer arietinum]
Length = 179
Score = 54.3 bits (129), Expect(2) = 1e-11
Identities = 27/60 (45%), Positives = 37/60 (61%)
Frame = +3
Query: 612 SLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDCHCFPRKSH 791
SLG+I+Q TL +++K+C ++ F ++ KFT ACKK L I CKD K C C K H
Sbjct: 13 SLGQIHQITLESLEKLCRLHQHFSEIVQQKSKFTKACKKPYLEIKCKDNK-CSCSTGKKH 71
Score = 42.7 bits (99), Expect(2) = 1e-11
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 878 QGRRKND*CFNCGQKGHFGKKCPRKPVRGQRL 973
+G+++N CF CG+KGHF K+CP K + +L
Sbjct: 101 RGKKENQRCFVCGEKGHFSKRCPNKTNKAAKL 132
>ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, partial [Eutrema
salsugineum] gi|557104186|gb|ESQ44532.1| hypothetical
protein EUTSA_v10003477mg, partial [Eutrema salsugineum]
Length = 751
Score = 53.1 bits (126), Expect(2) = 3e-11
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +3
Query: 600 IGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDCHC 773
+ Q SLGEIYQ +L A++K+C+ K FK LQ AC + +L I CK KK C C
Sbjct: 623 LSQASLGEIYQISLAALEKLCNHQKFFKQLQEQGTLLGRACDRPELSIKCK-KKRCGC 679
Score = 42.7 bits (99), Expect(2) = 3e-11
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 8/154 (5%)
Frame = +1
Query: 73 PPSPSLDPVPMDEDQDETSDLDPAPWFTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDA 252
P P P D + S D F+ DN+P KW EM AW+ +
Sbjct: 446 PQRPQTPP-----DWNPRSHTDSHSGFSFDNVPPSKWRDKIYEMLAWLTEQLLNPGATLP 500
Query: 253 EVLKEFTTRFTGTLKDWIYSPW*LSQTPALCCRHSNFLGSISY*I------PWRFFTQ*S 414
V+ + ++F G L+ W S L L R S+ + ++ I W +T
Sbjct: 501 TVIDKLISKFHGRLRQWWTS---LGDYRELQIRQSHSVDTVIEHIHNEFLGMWDHYT--- 554
Query: 415 *IQTGILHYEM--LFLNKKDLDRHYQRMLRRYHA 510
IQ + M +KDL++HY+RM +R +A
Sbjct: 555 -IQAREEYMSMRCCSFKRKDLEKHYERMSKRLYA 587
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 42.7 bits (99), Expect(3) = 4e-11
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Frame = +1
Query: 151 FTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDAEVLKEFTTRFTGTLKDWIYSPW*LSQ 330
F+LD++ KW ++ W+ T Q ++ +L EFT R +GTL++W S +
Sbjct: 855 FSLDDISITKWPERIQDFHTWMLTKQL-VEREPFLILSEFTARLSGTLREWWNSVGPDDK 913
Query: 331 TPALCCR---------HSNFLGSISY*IPWRFFTQ*S*IQTGILHYEMLFLNKKDLDRHY 483
L + +S F G S ++ I + L ++K +DRH+
Sbjct: 914 NRFLTSQDFTWNIRILYSYFCGDQS--------QNKEELRRQIFEMKCLSYDRKKIDRHF 965
Query: 484 QRMLRRYH 507
QRM++ ++
Sbjct: 966 QRMIKLFY 973
Score = 40.4 bits (93), Expect(3) = 4e-11
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 597 AIGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDC--H 770
++ Q+ +G+I Q+ +D +C + K F ++ S AC K DL+I K K C +
Sbjct: 1007 SVTQMHVGDIRQTAFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLII--KGDKGCSGY 1064
Query: 771 CFPRKSHRH 797
C P + ++
Sbjct: 1065 CNPSRRRKY 1073
Score = 31.6 bits (70), Expect(3) = 4e-11
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 884 RRKND*CFNCGQKGHFGKKCPR 949
R+K CF CG+ GHF + CP+
Sbjct: 1106 RQKPRSCFTCGKIGHFSRNCPQ 1127
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 42.7 bits (99), Expect(3) = 4e-11
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Frame = +1
Query: 151 FTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDAEVLKEFTTRFTGTLKDWIYSPW*LSQ 330
F+LD++ KW ++ W+ T Q ++ +L EFT R +GTL++W S +
Sbjct: 856 FSLDDISITKWPERIQDFHTWMLTKQL-VEREPFLILSEFTARLSGTLREWWNSVGPDDK 914
Query: 331 TPALCCR---------HSNFLGSISY*IPWRFFTQ*S*IQTGILHYEMLFLNKKDLDRHY 483
L + +S F G S ++ I + L ++K +DRH+
Sbjct: 915 NRFLTSQDFTWNIRILYSYFCGDQS--------QNKEELRRQIFEMKCLSYDRKKIDRHF 966
Query: 484 QRMLRRYH 507
QRM++ ++
Sbjct: 967 QRMIKLFY 974
Score = 40.4 bits (93), Expect(3) = 4e-11
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 597 AIGQLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDC--H 770
++ Q+ +G+I Q+ +D +C + K F ++ S AC K DL+I K K C +
Sbjct: 1008 SVTQMHVGDIRQTAFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLII--KGDKGCSGY 1065
Query: 771 CFPRKSHRH 797
C P + ++
Sbjct: 1066 CNPSRRRKY 1074
Score = 31.6 bits (70), Expect(3) = 4e-11
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 884 RRKND*CFNCGQKGHFGKKCPR 949
R+K CF CG+ GHF + CP+
Sbjct: 1107 RQKPRSCFTCGKIGHFSRNCPQ 1128
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 42.7 bits (99), Expect(3) = 1e-10
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Frame = +1
Query: 151 FTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDAEVLKEFTTRFTGTLKDWIYSPW*LSQ 330
F+LD++ KW ++ W+ T Q ++ +L EFT R +GTL++W S +
Sbjct: 856 FSLDDISITKWPERIQDFHTWMLTKQL-VEREPFLILSEFTARLSGTLREWWNSVGPDDK 914
Query: 331 TPALCCR---------HSNFLGSISY*IPWRFFTQ*S*IQTGILHYEMLFLNKKDLDRHY 483
L + +S F G S ++ I + L ++K +DRH+
Sbjct: 915 NRFLTSQDFTWNIRILYSYFCGDQS--------QNKEELRRQIFEMKCLSYDRKKIDRHF 966
Query: 484 QRMLRRYH 507
QRM++ ++
Sbjct: 967 QRMIKLFY 974
Score = 38.9 bits (89), Expect(3) = 1e-10
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 606 QLSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGCKDKKDC--HCFP 779
Q+ +G+I Q+ +D +C + K F ++ S AC K DL+I K K C +C P
Sbjct: 1011 QMHVGDIRQTGFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLII--KGDKGCSGYCNP 1068
Query: 780 RKSHRH 797
+ ++
Sbjct: 1069 SRRRKY 1074
Score = 31.6 bits (70), Expect(3) = 1e-10
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 884 RRKND*CFNCGQKGHFGKKCPR 949
R+K CF CG+ GHF + CP+
Sbjct: 1107 RQKPRSCFTCGKIGHFSRNCPQ 1128
>ref|XP_006405193.1| hypothetical protein EUTSA_v10000496mg [Eutrema salsugineum]
gi|557106321|gb|ESQ46646.1| hypothetical protein
EUTSA_v10000496mg [Eutrema salsugineum]
Length = 957
Score = 52.0 bits (123), Expect(2) = 3e-10
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Frame = +1
Query: 151 FTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDAE-VLKEFTTRFTGTLKDW-----IYS 312
FT D++P KW +E AW+++ + S E V+++FTTR +G LK+W Y
Sbjct: 748 FTFDDIPFEKWNDRLDEFHAWMNS---EAITSPLELVIQQFTTRLSGALKEWWNSLGEYR 804
Query: 313 PW*LSQT--PALCCR-HSNFLGSISY*IPWRFFTQ*S*IQTGILHYEMLFLNKKDLDRHY 483
+ QT P L H F+G+ P Q +Q + L K+DL +H+
Sbjct: 805 QQQVYQTTIPLLLGEIHREFIGT-----PTHLKEQ---LQEEFFTAKCCSLKKRDLAKHF 856
Query: 484 QRMLRRYHA 510
+R RRY+A
Sbjct: 857 ERQTRRYYA 865
Score = 40.4 bits (93), Expect(2) = 3e-10
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 609 LSLGEIYQSTL*AIDKICDQNKTFKDLQSNSHKFTTACKKDDLLIGC-KDKKDC 767
+S+G+I Q +DK+C Q K + + S + + C + DL I C K KK C
Sbjct: 904 ISIGQIQQYVFQTLDKLCKQKKFWMEFMDKSKQLSRICARPDLSIKCSKSKKTC 957
>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 894
Score = 68.6 bits (166), Expect = 4e-09
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 13/212 (6%)
Frame = +2
Query: 377 HIEFLGDSSLSDLKYKQEFFTMKCCS*TRRILIGTIS-VC*GVIMLDGINAHDLKYTFIA 553
H EF+GD + D K +QEFF M+CCS + L + +L+G N H LK +I+
Sbjct: 51 HNEFIGDMEIFDRKNRQEFFEMRCCSLKDKDLERHYQRMTQRYYVLNGFNDHTLKNIYIS 110
Query: 554 SLPEIIQPELNNYLGY----WST*SWGNLPVYPLSY**NL*PEQDLQRSSKQFSQIYHSL 721
SLP+ +QPE++ + T S G + L + L R + FS++
Sbjct: 111 SLPQELQPEIHRMIAAAQKDVKTLSLGQIHQIALE------ALEKLCRLHQHFSEVMQQK 164
Query: 722 QKR*SSYRL*GQEGLPLFSPK--------VS*ASYRFSKKISSKDNXXXXXXXXXXXXXX 877
K + + P K + + K +
Sbjct: 165 SKFIKACK------KPYLEIKCKDKICSCTTRKKHHRQKYTKPSGSFKKKALKFFKKKPF 218
Query: 878 QGRRKND*CFNCGQKGHFGKKCPRKPVRGQRL 973
+G+++N CF CG+KGHF K+CP K + +L
Sbjct: 219 RGKKENQRCFVCGEKGHFSKRCPNKTSKAAKL 250
>ref|XP_003608874.1| hypothetical protein MTR_4g103910 [Medicago truncatula]
gi|355509929|gb|AES91071.1| hypothetical protein
MTR_4g103910 [Medicago truncatula]
Length = 160
Score = 62.0 bits (149), Expect(2) = 4e-09
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +1
Query: 121 ETSDLDPAPWFTLDNLPCHKWGAYFEEMGAWVDTIQYKTKKSDAEVLKEFTTRFTGTLKD 300
E + + PWFTLD++P ++W E GAW+DT KT ++++EF R TGTLK
Sbjct: 60 EKTKTNSGPWFTLDDIPPNRWRKGLLEFGAWLDTHLMKTDVDSYKIIEEFCCRMTGTLKK 119
Query: 301 WIYS 312
W ++
Sbjct: 120 WYHN 123
Score = 26.6 bits (57), Expect(2) = 4e-09
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 314 LGDYRRHQLYAADIPTFWARFHIEFLGDSSLSDLKYKQEF 433
LG +++ +L AA + H EF+ D + D K +QEF
Sbjct: 124 LGTFKQDELLAAAV---LGVLHNEFISDMEIYDRKSRQEF 160
>ref|XP_006478656.1| PREDICTED: uncharacterized protein LOC102627079 [Citrus sinensis]
Length = 628
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 13/89 (14%)
Frame = +1
Query: 76 PSPSLDP---VPMDEDQDETSDLDPA----------PWFTLDNLPCHKWGAYFEEMGAWV 216
PSPS P + ++E + +T+ P+ PWFT D++ KW F+E AW+
Sbjct: 11 PSPSSPPPTTLIVEEAESDTNPTTPSHDNPPKPSNGPWFTFDDILKVKWQVRFQEFSAWI 70
Query: 217 DTIQYKTKKSDAEVLKEFTTRFTGTLKDW 303
D +T + +VLKEF++RFTG+L+DW
Sbjct: 71 DVQMLRTGATSQKVLKEFSSRFTGSLRDW 99