BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00038532
         (1086 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                71   2e-13
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    67   5e-12
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    66   8e-12
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                63   1e-11
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    64   3e-11
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    63   3e-11
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    60   1e-10
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    63   2e-10
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...    54   5e-10
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             57   5e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    60   9e-10
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    61   2e-09
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    58   3e-09
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    49   3e-09
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...    55   8e-09
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              57   1e-08
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    45   2e-08
ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part...    45   3e-08
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]                          57   4e-08
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    45   4e-08

>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 70.9 bits (172), Expect(2) = 2e-13
 Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
 Frame = +2

Query: 317 FSGSQ-SKGLYLLSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQ 493
           +SGS+ S     +SW++VCKPK EGGLG+R  +E N    LK+ W + S  +SLW+KW+ 
Sbjct: 495 WSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVA 554

Query: 494 E--IS*VRIFVDSSPTEICSWILRKSLQ 571
           E  I    I+     T + SWI RK L+
Sbjct: 555 EYLIRKKSIWSLKQSTSMGSWIWRKILK 582



 Score = 32.7 bits (73), Expect(2) = 2e-13
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLGA 329
           LI+SVL +   +W  AF LP + ++ ID + +SFL  G+
Sbjct: 460 LIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGS 498



 Score = 45.4 bits (106), Expect(2) = 2e-07
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
 Frame = +3

Query: 795 EDKIVWKLNSN---GQFSYKSAWNLIRRRNQQVSWFHSLWFRDRIPRNILTLW-KVFWRL 962
           ED ++W+  ++     FS +  W+LI+  +  VSW   +WFR   P+  L  W  +  RL
Sbjct: 669 EDTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRL 728

Query: 963 ATGSRVV 983
            TG R++
Sbjct: 729 PTGDRML 735



 Score = 37.7 bits (86), Expect(2) = 2e-07
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 986  NVPSNCSLCWNGVEDQDHLFFQCKFSSRIW 1075
            +V  NC LC N  +  +HLFF C ++S +W
Sbjct: 742  SVSGNCVLCTNNSKTLEHLFFSCSYASTVW 771


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 66.6 bits (161), Expect(2) = 5e-12
 Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = +2

Query: 350 LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQE--IS*VRIFVD 523
           ++W  VCKPK EGGLG+R  +E N    LK+ W + S  DSLW KWIQ   +  V  +  
Sbjct: 109 ITWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVSFWAV 168

Query: 524 SSPTEICSWILRKSLQ 571
              T + SW+ RK L+
Sbjct: 169 RENTSLGSWMWRKILK 184



 Score = 32.0 bits (71), Expect(2) = 5e-12
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLG 326
           LI SVL +   +W GAF LP   ++ ID M +++L  G
Sbjct: 62  LISSVLWSICNFWMGAFRLPRDCIREIDKMCSAYLWSG 99



 Score = 50.8 bits (120), Expect(2) = 2e-09
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = +3

Query: 795 EDKIVWKLNSN---GQFSYKSAWNLIRRRNQQVSWFHSLWFRDRIPRNILTLW-KVFWRL 962
           ED+ +WK   N     FS K  WN IR  + +V+W+  +WF   IP++   +W  V  RL
Sbjct: 271 EDRALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRL 330

Query: 963 ATGSRV 980
           +TG R+
Sbjct: 331 STGDRM 336



 Score = 39.3 bits (90), Expect(2) = 2e-09
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 983  LNVPSNCSLCWNGVEDQDHLFFQCKFSSRIW 1075
            + V + C LC   +E +DHLFF C F++ IW
Sbjct: 341  MGVDATCILCNKALESRDHLFFSCPFATEIW 371


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 66.2 bits (160), Expect(2) = 8e-12
 Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = +2

Query: 350 LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQEIS*VRIF--VD 523
           ++W  VCKPK EGGLG+R  +E N    LK+ W + S  DSLW KWIQ     ++F    
Sbjct: 190 IAWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFWAV 249

Query: 524 SSPTEICSWILRKSLQ 571
              T + SW+ RK L+
Sbjct: 250 RENTSLGSWMWRKILK 265



 Score = 31.6 bits (70), Expect(2) = 8e-12
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLG 326
           LI S+L +   +W GAF LP   ++ ID M +++L  G
Sbjct: 143 LISSILWSICNFWMGAFRLPRDCIREIDKMCSAYLWSG 180


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 62.8 bits (151), Expect(2) = 1e-11
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
 Frame = +2

Query: 350 LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQEIS*VR--IFVD 523
           +SW  VCKPK EGGLG+R  +E N    LK+ W + S  DSLW KW++     R   ++ 
Sbjct: 413 ISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIV 472

Query: 524 SSPTEICSWILRKSLQ 571
                + SWI +K L+
Sbjct: 473 KENANLGSWIWKKILK 488



 Score = 34.3 bits (77), Expect(2) = 1e-11
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLGAN 332
           LI S++ +S  +W  AF LP   +Q I+ + +SFL  G N
Sbjct: 366 LISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTN 405


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 64.3 bits (155), Expect(2) = 3e-11
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
 Frame = +2

Query: 350 LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQ-EIS*VRIFVDS 526
           +SW+ +CKPK+EGGLG+R   E N+  +LK+ W V S  DSLW KW +  +     F   
Sbjct: 265 VSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSL 324

Query: 527 SP-TEICSWILRKSLQ 571
           +P + + SW+ +K L+
Sbjct: 325 TPNSSLGSWMWKKMLK 340



 Score = 31.6 bits (70), Expect(2) = 3e-11
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLG 326
           LI SVL ++  +W  AF LP   L+ I+S+ ++FL  G
Sbjct: 218 LISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSG 255



 Score = 43.1 bits (100), Expect(2) = 6e-07
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = +3

Query: 795 EDKIVWKLNSN---GQFSYKSAWNLIRRRNQQVSWFHSLWFRDRIPRNILTLWKVFW-RL 962
           ED  +W+   +     FS K  WN +R+++ +V+W+  +WF    P+     W     RL
Sbjct: 428 EDATLWRGKGDVFKTSFSTKDTWNQVRKKSNEVAWYKGVWFSHSTPKYQFCTWLALRNRL 487

Query: 963 ATGSRV 980
           +TG R+
Sbjct: 488 STGYRM 493



 Score = 38.1 bits (87), Expect(2) = 6e-07
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 1001 CSLCWNGVEDQDHLFFQCKFSSRIWLKI 1084
            C+ C   +E +DHLFF C ++S IW  I
Sbjct: 504  CTFCSTSIETRDHLFFSCSYASAIWTAI 531


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 62.8 bits (151), Expect(2) = 3e-11
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
 Frame = +2

Query: 350 LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQE--IS*VRIFVD 523
           ++W  VCKPK EGGLG+R  +E N    LK+ W + S  DSLW KWI    +  V  +  
Sbjct: 242 IAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAV 301

Query: 524 SSPTEICSWILRKSLQ 571
              T + SW+ +K L+
Sbjct: 302 RENTSLGSWMWKKVLK 317



 Score = 33.1 bits (74), Expect(2) = 3e-11
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLGAN 332
           LI SVL +   +W GAF LP + ++ ID M +++L  G +
Sbjct: 195 LISSVLWSICNFWMGAFRLPRECIREIDKMCSAYLWSGGD 234


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 60.5 bits (145), Expect(2) = 1e-10
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = +2

Query: 350  LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQE--IS*VRIFVD 523
            ++W  VCK K EGGLG++  +E N   +LK+ W + S +DSLW KW+ +  I     +  
Sbjct: 1007 IAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSV 1066

Query: 524  SSPTEICSWILRKSLQ 571
               T + SW+ RK L+
Sbjct: 1067 KENTGLGSWLWRKILK 1082



 Score = 33.1 bits (74), Expect(2) = 1e-10
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 210  ELIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLG 326
            +LI+SVL +   +W   F LP   LQ I+ M ++FL  G
Sbjct: 959  QLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSG 997


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 977

 Score = 63.2 bits (152), Expect(2) = 2e-10
 Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = +2

Query: 350  LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQE--IS*VRIFVD 523
            +SW+ VCKPK+EGGLG+R  +E N    LK+ W + S  +SLW KWI++  +     +  
Sbjct: 817  VSWDDVCKPKKEGGLGLRSLKEANDVCCLKVVWKIVSHGNSLWVKWIEKFLLKNETFWFV 876

Query: 524  SSPTEICSWILRKSLQ 571
               T + SW+ RK ++
Sbjct: 877  KENTTLGSWMWRKLIK 892



 Score = 30.0 bits (66), Expect(2) = 2e-10
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLG 326
           LI SVL +   +W  AF LP + ++ ID + +SFL  G
Sbjct: 770 LISSVLWSICNFWLFAFRLPRECIRDIDKLCSSFLWSG 807


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score = 54.3 bits (129), Expect(2) = 5e-10
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +2

Query: 317 FSGS-QSKGLYLLSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWI 490
           +SGS + K   L++W+ VCKP R GGL +   E  N+  +LK  W + SK+D+LW KWI
Sbjct: 322 WSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKWI 380



 Score = 37.4 bits (85), Expect(2) = 5e-10
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +3

Query: 210 ELIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLGA 329
           +L+RS++ A   YW   F +P K +Q IDS+  SF+  G+
Sbjct: 286 QLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWSGS 325


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 56.6 bits (135), Expect(2) = 5e-10
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +2

Query: 332 SKGLYLLSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQEIS*VR 511
           S G   ++W ++C+P++EGGL  +  EE N    LK+ W V     SLW  W++     R
Sbjct: 193 STGTARVAWNIICRPRKEGGLNSKKLEELNKVFRLKMVWRVFKYASSLWVAWLKRNVLKR 252

Query: 512 -IFVDSSPTEICSWILRKSL 568
             F D+ PT   SW +RK L
Sbjct: 253 GSFWDTVPTARHSWNVRKLL 272



 Score = 35.0 bits (79), Expect(2) = 5e-10
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = +1

Query: 4   LVLDGVNESIVFYLQSNIGLSMGQLPFH*LGXXXXXXXXXXXXXXXXIDKIRARLQG*KN 183
           + L G+ +S    L S +G+++G  P   LG                ++KIRA++    +
Sbjct: 107 MFLGGLTDSEKQELSSCMGITLGNFPMKYLGLPVNTHRLTKADYEPLLEKIRAKVSNWSS 166

Query: 184 KMLSMAGKL 210
           K+LS AGK+
Sbjct: 167 KLLSYAGKI 175


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 60.5 bits (145), Expect(2) = 9e-10
 Identities = 24/49 (48%), Positives = 33/49 (67%)
 Frame = +2

Query: 350  LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQE 496
            +SW +VCKPK EGGLG+R  +E N    LK+ W + S  +SLW KW+ +
Sbjct: 860  ISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQ 908



 Score = 30.4 bits (67), Expect(2) = 9e-10
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLG 326
           LI SVL +   +W  AF LP K ++ ++ M ++FL  G
Sbjct: 813 LISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSG 850


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 60.8 bits (146), Expect(2) = 2e-09
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +2

Query: 350 LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQ 493
           ++WE VC+PKREGGLG++  +E N    LK+ W + S+ DSLW +WI+
Sbjct: 378 IAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIR 425



 Score = 29.3 bits (64), Expect(2) = 2e-09
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLG 326
           L+ SVL +   +W  AF LP + ++ ID + ++FL  G
Sbjct: 331 LVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFLWSG 368


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 57.8 bits (138), Expect(2) = 3e-09
 Identities = 24/46 (52%), Positives = 32/46 (69%)
 Frame = +2

Query: 350 LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKW 487
           +SW+ +CKPK +GGLG+R   E N+  +LK+ W V S  DSLW KW
Sbjct: 777 VSWDDICKPK-QGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKW 821



 Score = 31.6 bits (70), Expect(2) = 3e-09
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLG 326
           LI SVL ++  +W  AF LP   L+ I+S+ ++FL  G
Sbjct: 730 LISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSG 767


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 49.3 bits (116), Expect(2) = 3e-09
 Identities = 22/55 (40%), Positives = 31/55 (56%)
 Frame = +2

Query: 329 QSKGLYLLSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQ 493
           + +G   ++W+ VC P  EGGL IR     N+A  LKI W +  K  SLW  W++
Sbjct: 120 EGRGGAKVAWDEVCLPFDEGGLAIRDGSSWNIASTLKILWLLLVKSGSLWVAWVE 174



 Score = 40.0 bits (92), Expect(2) = 3e-09
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +3

Query: 210 ELIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLGANQ 335
           +L+RSVL++  +YW+  F LP K  + +D +L S+L  G  +
Sbjct: 79  QLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEE 120


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score = 54.7 bits (130), Expect(2) = 8e-09
 Identities = 23/52 (44%), Positives = 33/52 (63%)
 Frame = +2

Query: 335 KGLYLLSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWI 490
           K   L++W VVC PK+EGGLG+   ++ NL  + +I W    KKD LW +W+
Sbjct: 178 KNKSLIAWSVVCSPKKEGGLGLFNLKDWNLTLLSRILWDFHCKKDFLWVRWV 229



 Score = 33.1 bits (74), Expect(2) = 8e-09
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
 Frame = +1

Query: 16  GVNESIVFYLQSNIGLSMGQLPFH*LGXXXXXXXXXXXXXXXXIDKIRARLQG*KNKMLS 195
           G+    + ++Q   G ++G  PF  LG                + KI   +QG   K LS
Sbjct: 70  GIRPHELSHIQQLTGFNLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLS 129

Query: 196 MAGKLN*SDRSSKLLISIGRVLLVFPLR---LSRPSTLCWLASFLW 324
            AGKL       + +++    + +FPL    L R +  C   +FLW
Sbjct: 130 YAGKLELIRAVIQGIVNFW--MKIFPLSQSVLDRINASC--CNFLW 171


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 57.4 bits (137), Expect(2) = 1e-08
 Identities = 23/47 (48%), Positives = 32/47 (68%)
 Frame = +2

Query: 356 WEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQE 496
           W  VCKPK+EGGLG+R  +E N    LK+ W + S  +SLW +WI++
Sbjct: 389 WGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQ 435



 Score = 30.0 bits (66), Expect(2) = 1e-08
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLGAN-----QRVC 344
           LI SVL +   +W  AF LP + ++ ID + ++FL  G +      RVC
Sbjct: 340 LITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVC 388


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1| AT4g02490
            [Arabidopsis thaliana]
          Length = 657

 Score = 45.1 bits (105), Expect(2) = 2e-08
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = +2

Query: 980  GLNVPSNCSLCWNGVEDQDHLFFQCKFSSRIW 1075
            GL VP+ C LC    E +DHLFF C+FSSRIW
Sbjct: 617  GLIVPAECVLCNLVDETRDHLFFACRFSSRIW 648



 Score = 41.6 bits (96), Expect(2) = 2e-08
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
 Frame = +3

Query: 795 EDKIVWKLNS---NGQFSYKSAWNLIRRRNQQVSWFHSLWFRDRIPRNILTLWKVFW-RL 962
           +D  +WK+     + +FS    W  ++  +  VSW  ++WF +++P++    W   W RL
Sbjct: 548 DDSYLWKVGDRVPSSKFSTADTWRALQPFSVSVSWHKAVWFTNQVPKHAFISWVTAWNRL 607

Query: 963 ATGSRVVS 986
            T  R+ S
Sbjct: 608 HTRDRLRS 615


>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
            gi|482569649|gb|EOA33837.1| hypothetical protein
            CARUB_v10021318mg, partial [Capsella rubella]
          Length = 290

 Score = 45.4 bits (106), Expect(2) = 3e-08
 Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +2

Query: 968  RVKG-GLNVPSNCSLCWNGVEDQDHLFFQCKFSSRIW 1075
            R++G G+NVPS C LC +  E + HLFF+C +S  +W
Sbjct: 143  RLRGWGMNVPSECLLCTSSAESRLHLFFECAYSHEVW 179



 Score = 40.4 bits (93), Expect(2) = 3e-08
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
 Frame = +3

Query: 798 DKIVWKLNSN---GQFSYKSAWNLIRRRNQQVSWFHSLWFRDRIPRNILTLWKVFW-RLA 965
           D  +W+ + N   G FS    W         V WF S+WF++RIP++    W V   RL 
Sbjct: 80  DFFLWRNSPNEPPGVFSTSKTWISTHPAGPLVPWFKSVWFKERIPKHAFISWVVIRNRLT 139

Query: 966 TGSRV 980
           T  R+
Sbjct: 140 TRDRL 144


>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
          Length = 382

 Score = 57.0 bits (136), Expect(2) = 4e-08
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = +2

Query: 350 LSWEVVCKPKREGGLGIRLTEETNLAGILKIAWWVASKKDSLWSKWIQE 496
           LSW  VCKPK+EGGLG+R  +E N    LK+ W + S  +SLW +WI++
Sbjct: 277 LSWVDVCKPKQEGGLGLRPLKEINDVCCLKLIWRLVSHANSLWVQWIEK 325



 Score = 28.5 bits (62), Expect(2) = 4e-08
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 213 LIRSVLQASHIYWSGAFSLPFKALQTIDSMLASFLSLG 326
           LI SVL ++  +W  AF LP   ++ I+ + ++FL  G
Sbjct: 230 LITSVLWSTCNFWLSAFRLPRGCIKEIEKLCSAFLWSG 267


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 323

 Score = 45.4 bits (106), Expect(2) = 4e-08
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +2

Query: 980  GLNVPSNCSLCWNGVEDQDHLFFQCKFSSRIW 1075
            GLN+P+ C LC    E  DHLFFQC+FS+ IW
Sbjct: 189  GLNIPTVCVLCNVVDETHDHLFFQCQFSNEIW 220



 Score = 40.0 bits (92), Expect(2) = 4e-08
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +3

Query: 795 EDKIVWKLNSNGQ---FSYKSAWNLIRRRNQQVSWFHSLWFRDRIPRNILTLWKVFW-RL 962
           +D   WK + +     FS    W  +      V W  S+WF+DRIP++    W   W RL
Sbjct: 120 DDVYKWKPDHHAPSNIFSASKTWTALNPDGVLVPWQKSVWFKDRIPKHAFICWVAAWKRL 179

Query: 963 ATGSRV 980
            T  R+
Sbjct: 180 HTRDRL 185