BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00038130
         (998 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24510.3| unnamed protein product [Vitis vinifera]              410   e-112
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   410   e-112
gb|EXC20897.1| Cleavage and polyadenylation specificity factor s...   404   e-110
ref|XP_007038473.1| Cleavage and polyadenylation specificity fac...   402   e-110
ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation spec...   401   e-109
ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prun...   396   e-108
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   385   e-104
ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutr...   383   e-104
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec...   382   e-104
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec...   382   e-104
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr...   382   e-104
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr...   382   e-104
ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arab...   375   e-101
dbj|BAB11613.1| cleavage and polyadenylation specificity factor ...   373   e-101
ref|NP_199979.2| cleavage and polyadenylation specificity factor...   373   e-101
gb|AAN41460.1| putative cleavage and polyadenylation specificity...   373   e-101
ref|XP_006282172.1| hypothetical protein CARUB_v10028433mg [Caps...   369   1e-99
ref|XP_002318462.2| cleavage and polyadenylation specificity fac...   365   2e-98
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec...   364   3e-98
ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [A...   362   1e-97

>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  410 bits (1054), Expect = e-112
 Identities = 199/256 (77%), Positives = 226/256 (88%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELPARKGIGPIPNLVV 591
           MSYAAYKMMHWPTGIENCASGF+TH  ADFA QI  + +DDLE+E P ++ IGP+PNL+V
Sbjct: 1   MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQTDDLESEWPTKRQIGPLPNLIV 60

Query: 590 TAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAIL 411
           TA NILEVY+VRVQE DDS+ SR+  E KRGG MAG+SGA LELVC Y+L GNVETM +L
Sbjct: 61  TAANILEVYMVRVQE-DDSRESRASAETKRGGVMAGISGAALELVCQYRLHGNVETMTVL 119

Query: 410 SVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFAR 231
             GGGD+ ++RDSIILAF+DAKIS+LEFDDSI+GLRTSSMHCFEGPEW +LKRG ESFAR
Sbjct: 120 PSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFAR 179

Query: 230 GPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISLR 51
           GPLVKVDPQGRC GVLVYG+QMIILKA+QAGYGLVGD+EA  SG+  SAR+ESSYVISLR
Sbjct: 180 GPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLR 239

Query: 50  DLDMKHVKDFTFVYGY 3
           DLDMKHVKDFTFV+GY
Sbjct: 240 DLDMKHVKDFTFVHGY 255


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Vitis vinifera]
          Length = 1442

 Score =  410 bits (1054), Expect = e-112
 Identities = 199/256 (77%), Positives = 226/256 (88%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELPARKGIGPIPNLVV 591
           MSYAAYKMMHWPTGIENCASGF+TH  ADFA QI  + +DDLE+E P ++ IGP+PNL+V
Sbjct: 1   MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQTDDLESEWPTKRQIGPLPNLIV 60

Query: 590 TAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAIL 411
           TA NILEVY+VRVQE DDS+ SR+  E KRGG MAG+SGA LELVC Y+L GNVETM +L
Sbjct: 61  TAANILEVYMVRVQE-DDSRESRASAETKRGGVMAGISGAALELVCQYRLHGNVETMTVL 119

Query: 410 SVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFAR 231
             GGGD+ ++RDSIILAF+DAKIS+LEFDDSI+GLRTSSMHCFEGPEW +LKRG ESFAR
Sbjct: 120 PSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFAR 179

Query: 230 GPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISLR 51
           GPLVKVDPQGRC GVLVYG+QMIILKA+QAGYGLVGD+EA  SG+  SAR+ESSYVISLR
Sbjct: 180 GPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLR 239

Query: 50  DLDMKHVKDFTFVYGY 3
           DLDMKHVKDFTFV+GY
Sbjct: 240 DLDMKHVKDFTFVHGY 255


>gb|EXC20897.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
           notabilis]
          Length = 1479

 Score =  404 bits (1038), Expect = e-110
 Identities = 191/257 (74%), Positives = 228/257 (88%), Gaps = 1/257 (0%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELPA-RKGIGPIPNLV 594
           MS+AAYKMMHWPTGIENCA+GF++H  ADF  +IP + SDDL+++ PA R+  GP+PNLV
Sbjct: 1   MSFAAYKMMHWPTGIENCAAGFVSHSRADFVPRIPPIQSDDLDSDWPAGRRETGPVPNLV 60

Query: 593 VTAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAI 414
           VTAGN+LEVYVVR+QEEDD++ SR+P E++RGG M GLSGA LELVCHY+L GNV+T+A+
Sbjct: 61  VTAGNVLEVYVVRLQEEDDTRSSRAPAESRRGGLMDGLSGASLELVCHYRLHGNVQTIAV 120

Query: 413 LSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFA 234
           LS GGGD  ++RDSIIL+F+DAKIS+LEFDDSI+GLRTSSMHCFEGPEW YLKRGRESFA
Sbjct: 121 LSSGGGDGSRRRDSIILSFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWLYLKRGRESFA 180

Query: 233 RGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISL 54
           RGPLVKVDPQGRC GVL Y +QMI+LKAAQAG GLVG+++A GSG   SARIESSY+I+L
Sbjct: 181 RGPLVKVDPQGRCAGVLAYNIQMIMLKAAQAGSGLVGEEDALGSGGAVSARIESSYIINL 240

Query: 53  RDLDMKHVKDFTFVYGY 3
           RDLDMKH+KDF FV+GY
Sbjct: 241 RDLDMKHIKDFVFVHGY 257


>ref|XP_007038473.1| Cleavage and polyadenylation specificity factor 160 isoform 1
           [Theobroma cacao] gi|508775718|gb|EOY22974.1| Cleavage
           and polyadenylation specificity factor 160 isoform 1
           [Theobroma cacao]
          Length = 1457

 Score =  402 bits (1034), Expect = e-110
 Identities = 190/256 (74%), Positives = 226/256 (88%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELPARKGIGPIPNLVV 591
           MSYAAYKMMHWPTGIENCASGF+THC ADF  QIPL  ++DLE+E PAR+GIGP+PNL+V
Sbjct: 1   MSYAAYKMMHWPTGIENCASGFVTHCRADFTPQIPLNQTEDLESEWPARRGIGPVPNLIV 60

Query: 590 TAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAIL 411
           TA N+LE+YVVRVQEE   + +R+  E KRGG + G+SG  LELVC+Y+L GNVE+MA+L
Sbjct: 61  TAANLLEIYVVRVQEEG-RREARNSTEVKRGGVLDGVSGVSLELVCNYRLHGNVESMAVL 119

Query: 410 SVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFAR 231
           S+GGGD  ++RDSIILAF+DAKIS+LEFDDSI+GLRT+SMHCFEGPEW +LKRGRESFAR
Sbjct: 120 SIGGGDGSRRRDSIILAFKDAKISVLEFDDSIHGLRTTSMHCFEGPEWLHLKRGRESFAR 179

Query: 230 GPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISLR 51
           GPLVKVDPQGRCGGVLVY +QMIILKA+QAG G VG+D+A GSG   SAR+ESSY+I+LR
Sbjct: 180 GPLVKVDPQGRCGGVLVYDLQMIILKASQAGSGFVGEDDAFGSGGAVSARVESSYIINLR 239

Query: 50  DLDMKHVKDFTFVYGY 3
           DLD+KH+KDF FV+GY
Sbjct: 240 DLDVKHIKDFIFVHGY 255


>ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Fragaria vesca subsp. vesca]
          Length = 1439

 Score =  401 bits (1031), Expect = e-109
 Identities = 192/257 (74%), Positives = 225/257 (87%), Gaps = 1/257 (0%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELPA-RKGIGPIPNLV 594
           MSYAA+KMMHWPTGIENCA+GFITH  ADF  +IP + +DDL+++ PA R+ IGP+PNLV
Sbjct: 1   MSYAAHKMMHWPTGIENCAAGFITHSRADFVPRIPQIQTDDLDSDWPAPRREIGPVPNLV 60

Query: 593 VTAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAI 414
           VTA N+LEVYVVRVQE+D ++GSR+  E+KRGG M G++GA LELVCHY+L GNV TMA+
Sbjct: 61  VTAANVLEVYVVRVQEQDTARGSRASGESKRGGLMDGVAGASLELVCHYRLHGNVMTMAV 120

Query: 413 LSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFA 234
           LS GGGD  K+RD+IIL F DAKIS+LEFDDSI+GLRTSSMHCFEGPEW +L+RGRESFA
Sbjct: 121 LSSGGGDGSKRRDAIILTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGRESFA 180

Query: 233 RGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISL 54
           RGP VKVDPQGRCGGVLVY +Q+IILKAAQ GYGLVGDD+   SGA  SAR+ESSY+ISL
Sbjct: 181 RGPSVKVDPQGRCGGVLVYDLQLIILKAAQGGYGLVGDDDGFASGAAISARVESSYIISL 240

Query: 53  RDLDMKHVKDFTFVYGY 3
           RD+DMKHVKDFTFV+GY
Sbjct: 241 RDMDMKHVKDFTFVHGY 257


>ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
           gi|462416772|gb|EMJ21509.1| hypothetical protein
           PRUPE_ppa000211mg [Prunus persica]
          Length = 1459

 Score =  396 bits (1018), Expect = e-108
 Identities = 189/257 (73%), Positives = 225/257 (87%), Gaps = 1/257 (0%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELP-ARKGIGPIPNLV 594
           MS+AAYKMMHWPTGIENCASGFI+H  +DF  +IP + ++DLE+E P +R+ IGPIP+LV
Sbjct: 1   MSFAAYKMMHWPTGIENCASGFISHSRSDFVPRIPPIQTEDLESEWPTSRREIGPIPDLV 60

Query: 593 VTAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAI 414
           VTAGN+LEVYVVRVQEED ++G R+  E KRGG M G+SGA LELVCHY+L GNV TMA+
Sbjct: 61  VTAGNVLEVYVVRVQEEDGTRGPRASGEPKRGGLMDGVSGASLELVCHYRLHGNVVTMAV 120

Query: 413 LSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFA 234
           LS GGGD  ++RDSIIL F DAKIS+LEFDDSI+GLRTSSMHCFEGPEW +L+RGRESFA
Sbjct: 121 LSSGGGDGSRRRDSIILTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGRESFA 180

Query: 233 RGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISL 54
           RGPLVKVDPQGRCG +LVYG+QMIILKA+Q G GLVGDD++ GSG   S+RIESSY+++L
Sbjct: 181 RGPLVKVDPQGRCGSILVYGLQMIILKASQGGSGLVGDDDSFGSGGAISSRIESSYIVNL 240

Query: 53  RDLDMKHVKDFTFVYGY 3
           RD+DMKHVKDFTF++GY
Sbjct: 241 RDMDMKHVKDFTFLHGY 257


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
           [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
           and polyadenylation specificity factor cpsf, putative
           [Ricinus communis]
          Length = 1461

 Score =  385 bits (990), Expect = e-104
 Identities = 187/257 (72%), Positives = 224/257 (87%), Gaps = 1/257 (0%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELP-ARKGIGPIPNLV 594
           MSYAAYKM+HWPTGIE+CASG+ITH  ADF  QIP + +D+L++E P +++GIGP+PNL+
Sbjct: 1   MSYAAYKMLHWPTGIESCASGYITHSRADFVPQIPPIQTDNLDSEWPPSKRGIGPMPNLI 60

Query: 593 VTAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAI 414
           VTAG++LEVYVVRVQE D S+ SRS  E KRGG M G+SGA LELVCHY+L GNVE+M +
Sbjct: 61  VTAGSVLEVYVVRVQE-DGSRESRSSRETKRGGLMDGVSGASLELVCHYRLHGNVESMVV 119

Query: 413 LSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFA 234
           L   GGDS ++RDSIILAF+DAKIS+LEFDDSI+GLRTSSMHCFEGPEW +LKRGRESFA
Sbjct: 120 LPTEGGDSSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLKRGRESFA 179

Query: 233 RGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISL 54
           RGPL+KVDPQGRCGG+LVY MQMIIL+AAQA  GLVGDD+A  SG + SAR++SSYVI+L
Sbjct: 180 RGPLLKVDPQGRCGGILVYDMQMIILRAAQASSGLVGDDDALSSGGSISARVQSSYVINL 239

Query: 53  RDLDMKHVKDFTFVYGY 3
           RD+DMKHVKDF F++ Y
Sbjct: 240 RDMDMKHVKDFIFLHDY 256


>ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutrema salsugineum]
           gi|557103022|gb|ESQ43385.1| hypothetical protein
           EUTSA_v10012441mg [Eutrema salsugineum]
          Length = 1445

 Score =  383 bits (983), Expect = e-104
 Identities = 186/259 (71%), Positives = 224/259 (86%), Gaps = 3/259 (1%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFA-QQIPLVPSDDLETELPA-RKGIGPIPNL 597
           MS+AA+KMMHWPTG+ENCASG+ITH  +D   QQIP+V  DDLE E PA ++GIG +PN+
Sbjct: 1   MSFAAFKMMHWPTGVENCASGYITHSISDTTTQQIPIVSGDDLEAEWPAPKRGIGAVPNV 60

Query: 596 VVTAGNILEVYVVRVQEE-DDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETM 420
           V+TAGNILEVYVVRVQEE + S+  R+P   +RGG M G+SG  LELVCHY+L GNVE++
Sbjct: 61  VITAGNILEVYVVRVQEEVNTSQEPRNPKLVRRGGVMEGVSGVSLELVCHYRLHGNVESL 120

Query: 419 AILSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRES 240
           A+L +GGG+S K RDSI+L FRDAKIS+LEFDDSI+GLR +SMHCFEGP+W +LKRGRES
Sbjct: 121 AVLPMGGGNSSKGRDSIVLTFRDAKISVLEFDDSIHGLRMNSMHCFEGPDWLHLKRGRES 180

Query: 239 FARGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVI 60
           FARGPLVKVDPQGRCGGVLVYG+QMIILKA+QAG+GLVGDD+   SG T SAR+ESSY+I
Sbjct: 181 FARGPLVKVDPQGRCGGVLVYGLQMIILKASQAGFGLVGDDDPFSSGGTVSARVESSYII 240

Query: 59  SLRDLDMKHVKDFTFVYGY 3
           +LRDL+MKHVKDF F++GY
Sbjct: 241 NLRDLEMKHVKDFVFLHGY 259


>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like isoform X2 [Citrus sinensis]
          Length = 1457

 Score =  382 bits (982), Expect = e-104
 Identities = 185/256 (72%), Positives = 220/256 (85%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELPARKGIGPIPNLVV 591
           MS+AAYKMMHWPTGI NC SGFITH  AD+  QIPL+ +++L++ELP+++GIGP+PNLVV
Sbjct: 1   MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSELPSKRGIGPVPNLVV 60

Query: 590 TAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAIL 411
           TA N++E+YVVRVQEE  SK S++  E KR   M G+S A LELVCHY+L GNVE++AIL
Sbjct: 61  TAANVIEIYVVRVQEEG-SKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLAIL 119

Query: 410 SVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFAR 231
           S GG D+ ++RDSIILAF DAKIS+LEFDDSI+GLR +SMHCFE PEW +LKRGRESFAR
Sbjct: 120 SQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFAR 179

Query: 230 GPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISLR 51
           GPLVKVDPQGRCGGVLVYG+QMIILKA+Q G GLVGD++  GSG   SARIESS+VI+LR
Sbjct: 180 GPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLR 239

Query: 50  DLDMKHVKDFTFVYGY 3
           DLDMKHVKDF FV+GY
Sbjct: 240 DLDMKHVKDFIFVHGY 255


>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like isoform X1 [Citrus sinensis]
          Length = 1458

 Score =  382 bits (982), Expect = e-104
 Identities = 185/256 (72%), Positives = 220/256 (85%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELPARKGIGPIPNLVV 591
           MS+AAYKMMHWPTGI NC SGFITH  AD+  QIPL+ +++L++ELP+++GIGP+PNLVV
Sbjct: 1   MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSELPSKRGIGPVPNLVV 60

Query: 590 TAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAIL 411
           TA N++E+YVVRVQEE  SK S++  E KR   M G+S A LELVCHY+L GNVE++AIL
Sbjct: 61  TAANVIEIYVVRVQEEG-SKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLAIL 119

Query: 410 SVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFAR 231
           S GG D+ ++RDSIILAF DAKIS+LEFDDSI+GLR +SMHCFE PEW +LKRGRESFAR
Sbjct: 120 SQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFAR 179

Query: 230 GPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISLR 51
           GPLVKVDPQGRCGGVLVYG+QMIILKA+Q G GLVGD++  GSG   SARIESS+VI+LR
Sbjct: 180 GPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLR 239

Query: 50  DLDMKHVKDFTFVYGY 3
           DLDMKHVKDF FV+GY
Sbjct: 240 DLDMKHVKDFIFVHGY 255


>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
           gi|557523633|gb|ESR35000.1| hypothetical protein
           CICLE_v10004147mg [Citrus clementina]
          Length = 1457

 Score =  382 bits (982), Expect = e-104
 Identities = 185/256 (72%), Positives = 220/256 (85%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELPARKGIGPIPNLVV 591
           MS+AAYKMMHWPTGI NC SGFITH  AD+  QIPL+ +++L++ELP+++GIGP+PNLVV
Sbjct: 1   MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSELPSKRGIGPVPNLVV 60

Query: 590 TAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAIL 411
           TA N++E+YVVRVQEE  SK S++  E KR   M G+S A LELVCHY+L GNVE++AIL
Sbjct: 61  TAANVIEIYVVRVQEEG-SKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLAIL 119

Query: 410 SVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFAR 231
           S GG D+ ++RDSIILAF DAKIS+LEFDDSI+GLR +SMHCFE PEW +LKRGRESFAR
Sbjct: 120 SQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFAR 179

Query: 230 GPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISLR 51
           GPLVKVDPQGRCGGVLVYG+QMIILKA+Q G GLVGD++  GSG   SARIESS+VI+LR
Sbjct: 180 GPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLR 239

Query: 50  DLDMKHVKDFTFVYGY 3
           DLDMKHVKDF FV+GY
Sbjct: 240 DLDMKHVKDFIFVHGY 255


>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
           gi|557523632|gb|ESR34999.1| hypothetical protein
           CICLE_v10004147mg [Citrus clementina]
          Length = 1458

 Score =  382 bits (982), Expect = e-104
 Identities = 185/256 (72%), Positives = 220/256 (85%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELPARKGIGPIPNLVV 591
           MS+AAYKMMHWPTGI NC SGFITH  AD+  QIPL+ +++L++ELP+++GIGP+PNLVV
Sbjct: 1   MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSELPSKRGIGPVPNLVV 60

Query: 590 TAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMAIL 411
           TA N++E+YVVRVQEE  SK S++  E KR   M G+S A LELVCHY+L GNVE++AIL
Sbjct: 61  TAANVIEIYVVRVQEEG-SKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLAIL 119

Query: 410 SVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESFAR 231
           S GG D+ ++RDSIILAF DAKIS+LEFDDSI+GLR +SMHCFE PEW +LKRGRESFAR
Sbjct: 120 SQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFAR 179

Query: 230 GPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVISLR 51
           GPLVKVDPQGRCGGVLVYG+QMIILKA+Q G GLVGD++  GSG   SARIESS+VI+LR
Sbjct: 180 GPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLR 239

Query: 50  DLDMKHVKDFTFVYGY 3
           DLDMKHVKDF FV+GY
Sbjct: 240 DLDMKHVKDFIFVHGY 255


>ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
           lyrata] gi|297309955|gb|EFH40379.1| hypothetical protein
           ARALYDRAFT_495232 [Arabidopsis lyrata subsp. lyrata]
          Length = 1444

 Score =  375 bits (963), Expect = e-101
 Identities = 182/258 (70%), Positives = 217/258 (84%), Gaps = 2/258 (0%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDD-LETELPARK-GIGPIPNL 597
           MS+AA+KMMHWPTG+ENCASG+ITH  +D   QIP+V  DD +E E P  K GIGP+PN+
Sbjct: 1   MSFAAFKMMHWPTGVENCASGYITHSLSDSTLQIPIVSGDDDMEAEWPNHKRGIGPLPNV 60

Query: 596 VVTAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMA 417
           V+TAGNILEVY+VR QEE +++  R P   KRGG M G+SG  LELVCHY+L GNVE++A
Sbjct: 61  VITAGNILEVYIVRAQEEGNTQELRIPKLVKRGGVMDGVSGVSLELVCHYRLHGNVESIA 120

Query: 416 ILSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESF 237
           +L +GGG+S K RDSIIL FRDAKIS+LEFDDSI+ LR +SMHCFEGP+W +LKRGRESF
Sbjct: 121 VLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRESF 180

Query: 236 ARGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVIS 57
            RGPLVKVDPQGRCGGVLVYG+QMIILKA+Q G GLVGDD+A  SG T SAR+ESSY+I+
Sbjct: 181 PRGPLVKVDPQGRCGGVLVYGLQMIILKASQVGSGLVGDDDAFSSGGTVSARVESSYIIN 240

Query: 56  LRDLDMKHVKDFTFVYGY 3
           LRDL+MKHVKDF F++GY
Sbjct: 241 LRDLEMKHVKDFVFLHGY 258


>dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit
           [Arabidopsis thaliana]
          Length = 1448

 Score =  373 bits (957), Expect = e-101
 Identities = 180/258 (69%), Positives = 217/258 (84%), Gaps = 2/258 (0%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVP-SDDLETELP-ARKGIGPIPNL 597
           MS+AAYKMMHWPTG+ENCASG+ITH  +D   QIP+V   DD+E E P  ++GIGP+PN+
Sbjct: 1   MSFAAYKMMHWPTGVENCASGYITHSLSDSTLQIPIVSVHDDIEAEWPNPKRGIGPLPNV 60

Query: 596 VVTAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMA 417
           V+TA NILEVY+VR QEE +++  R+P  AKRGG M G+ G  LELVCHY+L GNVE++A
Sbjct: 61  VITAANILEVYIVRAQEEGNTQELRNPKLAKRGGVMDGVYGVSLELVCHYRLHGNVESIA 120

Query: 416 ILSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESF 237
           +L +GGG+S K RDSIIL FRDAKIS+LEFDDSI+ LR +SMHCFEGP+W +LKRGRESF
Sbjct: 121 VLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRESF 180

Query: 236 ARGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVIS 57
            RGPLVKVDPQGRCGGVLVYG+QMIILK +Q G GLVGDD+A  SG T SAR+ESSY+I+
Sbjct: 181 PRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSYIIN 240

Query: 56  LRDLDMKHVKDFTFVYGY 3
           LRDL+MKHVKDF F++GY
Sbjct: 241 LRDLEMKHVKDFVFLHGY 258


>ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
           [Arabidopsis thaliana]
           gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName:
           Full=Cleavage and polyadenylation specificity factor
           subunit 1; AltName: Full=Cleavage and polyadenylation
           specificity factor 160 kDa subunit; Short=AtCPSF160;
           Short=CPSF 160 kDa subunit gi|332008729|gb|AED96112.1|
           cleavage and polyadenylation specificity factor subunit
           1 [Arabidopsis thaliana]
          Length = 1442

 Score =  373 bits (957), Expect = e-101
 Identities = 180/258 (69%), Positives = 217/258 (84%), Gaps = 2/258 (0%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVP-SDDLETELP-ARKGIGPIPNL 597
           MS+AAYKMMHWPTG+ENCASG+ITH  +D   QIP+V   DD+E E P  ++GIGP+PN+
Sbjct: 1   MSFAAYKMMHWPTGVENCASGYITHSLSDSTLQIPIVSVHDDIEAEWPNPKRGIGPLPNV 60

Query: 596 VVTAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMA 417
           V+TA NILEVY+VR QEE +++  R+P  AKRGG M G+ G  LELVCHY+L GNVE++A
Sbjct: 61  VITAANILEVYIVRAQEEGNTQELRNPKLAKRGGVMDGVYGVSLELVCHYRLHGNVESIA 120

Query: 416 ILSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESF 237
           +L +GGG+S K RDSIIL FRDAKIS+LEFDDSI+ LR +SMHCFEGP+W +LKRGRESF
Sbjct: 121 VLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRESF 180

Query: 236 ARGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVIS 57
            RGPLVKVDPQGRCGGVLVYG+QMIILK +Q G GLVGDD+A  SG T SAR+ESSY+I+
Sbjct: 181 PRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSYIIN 240

Query: 56  LRDLDMKHVKDFTFVYGY 3
           LRDL+MKHVKDF F++GY
Sbjct: 241 LRDLEMKHVKDFVFLHGY 258


>gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
           subunit [Arabidopsis thaliana]
          Length = 1442

 Score =  373 bits (957), Expect = e-101
 Identities = 180/258 (69%), Positives = 217/258 (84%), Gaps = 2/258 (0%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVP-SDDLETELP-ARKGIGPIPNL 597
           MS+AAYKMMHWPTG+ENCASG+ITH  +D   QIP+V   DD+E E P  ++GIGP+PN+
Sbjct: 1   MSFAAYKMMHWPTGVENCASGYITHSLSDSTLQIPIVSVHDDIEAEWPNPKRGIGPLPNV 60

Query: 596 VVTAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMA 417
           V+TA NILEVY+VR QEE +++  R+P  AKRGG M G+ G  LELVCHY+L GNVE++A
Sbjct: 61  VITAANILEVYIVRAQEEGNTQELRNPKLAKRGGVMDGVYGVSLELVCHYRLHGNVESIA 120

Query: 416 ILSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESF 237
           +L +GGG+S K RDSIIL FRDAKIS+LEFDDSI+ LR +SMHCFEGP+W +LKRGRESF
Sbjct: 121 VLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRESF 180

Query: 236 ARGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVIS 57
            RGPLVKVDPQGRCGGVLVYG+QMIILK +Q G GLVGDD+A  SG T SAR+ESSY+I+
Sbjct: 181 PRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSYIIN 240

Query: 56  LRDLDMKHVKDFTFVYGY 3
           LRDL+MKHVKDF F++GY
Sbjct: 241 LRDLEMKHVKDFVFLHGY 258


>ref|XP_006282172.1| hypothetical protein CARUB_v10028433mg [Capsella rubella]
           gi|482550876|gb|EOA15070.1| hypothetical protein
           CARUB_v10028433mg [Capsella rubella]
          Length = 1447

 Score =  369 bits (947), Expect = 1e-99
 Identities = 180/261 (68%), Positives = 220/261 (84%), Gaps = 5/261 (1%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDD--LETELP--ARKGIGPIP 603
           MS+AA+KMMHWPTG+ENCASG+IT   +D   QIP+V +DD  LE EL    ++GI P+P
Sbjct: 1   MSFAAFKMMHWPTGVENCASGYITLSLSDSTLQIPIVSADDDDLEAELSNNTKRGIAPLP 60

Query: 602 NLVVTAGNILEVYVVRVQEEDDSKGSRSPVE-AKRGGFMAGLSGACLELVCHYKLQGNVE 426
           N+V+TAGNILEVYVVR QEE +++  R+P +  KRGG M GLSG  LELVCHY+L GNVE
Sbjct: 61  NVVITAGNILEVYVVRAQEEGNTQELRNPKQLVKRGGVMDGLSGVSLELVCHYRLHGNVE 120

Query: 425 TMAILSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGR 246
           ++A+L +GGG+S K RDSI+L FRDAKIS+LEFDDSI+GLR +SMHCFEGP+W +LK+GR
Sbjct: 121 SIAVLPMGGGNSSKGRDSIVLTFRDAKISVLEFDDSIHGLRMTSMHCFEGPDWLHLKKGR 180

Query: 245 ESFARGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSY 66
           ESF RGPLVKVDPQGRCGGVLVYG+QM+ILKA+Q G GLVGDD+A  SG T SAR+ESSY
Sbjct: 181 ESFPRGPLVKVDPQGRCGGVLVYGLQMVILKASQVGSGLVGDDDAFSSGGTVSARVESSY 240

Query: 65  VISLRDLDMKHVKDFTFVYGY 3
           +I+LRDL+MKHVKDF F++GY
Sbjct: 241 IINLRDLEMKHVKDFVFLHGY 261


>ref|XP_002318462.2| cleavage and polyadenylation specificity factor family protein
           [Populus trichocarpa] gi|550326263|gb|EEE96682.2|
           cleavage and polyadenylation specificity factor family
           protein [Populus trichocarpa]
          Length = 1455

 Score =  365 bits (936), Expect = 2e-98
 Identities = 181/260 (69%), Positives = 216/260 (83%), Gaps = 4/260 (1%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETELPARK----GIGPIP 603
           MSYAAYKMMHWPT I+ C SGF+TH  ++ A  +P + +DDL+++ P+R+    GIGP P
Sbjct: 1   MSYAAYKMMHWPTTIDTCVSGFVTHSRSESAH-LPQLHTDDLDSDWPSRRRHGGGIGPTP 59

Query: 602 NLVVTAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVET 423
           NL+V +GN+LE+YVVRVQEE    G+RS  E KRGG M G++GA LELVCHY+L GNVE+
Sbjct: 60  NLIVASGNVLELYVVRVQEE----GARSSGELKRGGVMDGVAGASLELVCHYRLHGNVES 115

Query: 422 MAILSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRE 243
           M +LSV GGD  ++RDSIILAF+DAKIS+LEFDDSI+GLRTSSMHCFEGP+W +LKRGRE
Sbjct: 116 MGVLSVEGGDDSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPDWRHLKRGRE 175

Query: 242 SFARGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYV 63
           SFARGPLVKVDPQGRCGGVLVY +QMIILKAAQAG  LV D++A GSGA  SA I SSY+
Sbjct: 176 SFARGPLVKVDPQGRCGGVLVYDLQMIILKAAQAGSALVQDEDAFGSGAAISAHIASSYI 235

Query: 62  ISLRDLDMKHVKDFTFVYGY 3
           I+LRDLDMKHVKDF FV+ Y
Sbjct: 236 INLRDLDMKHVKDFIFVHDY 255


>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cucumis sativus]
          Length = 1504

 Score =  364 bits (934), Expect = 3e-98
 Identities = 183/258 (70%), Positives = 215/258 (83%), Gaps = 2/258 (0%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPS--DDLETELPARKGIGPIPNL 597
           MS+AAY+MMHWPTGIENC S +ITH  ADF   +P V S  DDL+++   R+ IGP+PNL
Sbjct: 1   MSFAAYRMMHWPTGIENCDSAYITHSRADF---VPAVTSHSDDLDSDWHPRRDIGPVPNL 57

Query: 596 VVTAGNILEVYVVRVQEEDDSKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVETMA 417
           VVTAGN+LEVYVVRV EE   + S+S  E +RGG M G+SGA LELVCHY+L GNVE+MA
Sbjct: 58  VVTAGNVLEVYVVRVLEEG-GRESKSSGEVRRGGIMDGVSGASLELVCHYRLHGNVESMA 116

Query: 416 ILSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGRESF 237
           ILS  GGD  KKRDSIIL F++AKIS+LEFDDS + LRTSSMHCF+GP+W +LKRGRESF
Sbjct: 117 ILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSTHSLRTSSMHCFDGPQWLHLKRGRESF 176

Query: 236 ARGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSYVIS 57
           ARGP+VKVDPQGRCGGVLVYG+QMIILKA+QAG GLV DDEA G+    SAR+ESSY+I+
Sbjct: 177 ARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNTGAISARVESSYLIN 236

Query: 56  LRDLDMKHVKDFTFVYGY 3
           LRDLD+KHVKDF FV+GY
Sbjct: 237 LRDLDVKHVKDFVFVHGY 254


>ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [Amborella trichopoda]
           gi|548855397|gb|ERN13281.1| hypothetical protein
           AMTR_s00041p00037520 [Amborella trichopoda]
          Length = 1459

 Score =  362 bits (930), Expect = 1e-97
 Identities = 176/261 (67%), Positives = 214/261 (81%), Gaps = 5/261 (1%)
 Frame = -1

Query: 770 MSYAAYKMMHWPTGIENCASGFITHCGADFAQQIPLVPSDDLETEL---PARKGIGPIPN 600
           MS++A+K+MHW T +ENCASG+ITH  +DFA  +P + +DD ++E    P +  IGPIPN
Sbjct: 1   MSFSAFKLMHWATAVENCASGYITHSFSDFAASVPAIQNDDPDSEWDQPPVKARIGPIPN 60

Query: 599 LVVTAGNILEVYVVRVQEEDD--SKGSRSPVEAKRGGFMAGLSGACLELVCHYKLQGNVE 426
           LV++A N+LEVYV+RVQEED   S+ S +   +K GG +AG+SGA LELVCHY+L GNVE
Sbjct: 61  LVISAANVLEVYVIRVQEEDSKASRHSGASSGSKGGGVVAGVSGAWLELVCHYRLHGNVE 120

Query: 425 TMAILSVGGGDSCKKRDSIILAFRDAKISILEFDDSIYGLRTSSMHCFEGPEWHYLKRGR 246
           TMAILS G  D  +KRDSIIL F++AKIS+LE+DDS++GLRTSSMHCFEGPEW YLKRGR
Sbjct: 121 TMAILSAGSDDGRRKRDSIILTFKEAKISVLEYDDSLHGLRTSSMHCFEGPEWQYLKRGR 180

Query: 245 ESFARGPLVKVDPQGRCGGVLVYGMQMIILKAAQAGYGLVGDDEANGSGATRSARIESSY 66
           E+FARGPLV VDPQGRCGGVL+   QM+ILKA++AGYG VGDD+ANG   T S RIESSY
Sbjct: 181 ENFARGPLVYVDPQGRCGGVLICDSQMLILKASKAGYGFVGDDDANGPTGTVSIRIESSY 240

Query: 65  VISLRDLDMKHVKDFTFVYGY 3
           VISLR+LDMKHVKDF FV+GY
Sbjct: 241 VISLRELDMKHVKDFVFVHGY 261