BLASTX nr result

ID: Cocculus23_contig00037942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00037942
         (281 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65986.1| hypothetical protein VITISV_042143 [Vitis vinifera]    72   9e-20
ref|XP_002534720.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|...    57   3e-06

>emb|CAN65986.1| hypothetical protein VITISV_042143 [Vitis vinifera]
          Length = 138

 Score = 71.6 bits (174), Expect(2) = 9e-20
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = -1

Query: 245 GGGITPFSKEPYVTLSRHTAPSRNQDPSFPLTNGSS 138
           GGGITPFSKEPYVTLSRHTAPSRN+D  FPLTNGSS
Sbjct: 20  GGGITPFSKEPYVTLSRHTAPSRNKDLPFPLTNGSS 55



 Score = 50.8 bits (120), Expect(2) = 9e-20
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = -2

Query: 118 PFHSFID*FKVALACFQVQALAVEASRQKRTSGPGR 11
           PF+S      VA+ACFQVQALAVEASRQK TSGPGR
Sbjct: 61  PFYS-----SVAVACFQVQALAVEASRQKLTSGPGR 91


>ref|XP_002534720.1| conserved hypothetical protein [Ricinus communis]
           gi|223524693|gb|EEF27662.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 77

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 44/49 (89%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
 Frame = -3

Query: 279 VQLRGPLVGPDRWWYHTLLKGTVRDTLASYGSVPESG-PLLSFDQRVLE 136
           +QLRGPLVGPDRWWYHTLLKGTVRDTLASYGS PESG P  SFDQRVLE
Sbjct: 1   MQLRGPLVGPDRWWYHTLLKGTVRDTLASYGSAPESGPPPFSFDQRVLE 49


>ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|gb|AES58602.1| Maturase
           [Medicago truncatula]
          Length = 996

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +1

Query: 196 RESVTYGSFEKGVIPPPIRPDERSTELH 279
           RE++TYGSFEKGV PPPIRPDERSTELH
Sbjct: 880 RENLTYGSFEKGVRPPPIRPDERSTELH 907


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