BLASTX nr result
ID: Cocculus23_contig00037802
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00037802
(737 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY99339.1| pol-polyprotein [Silene latifolia] 103 8e-20
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 97 6e-18
gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 94 4e-17
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi... 93 1e-16
ref|XP_004298151.1| PREDICTED: uncharacterized protein LOC101300... 91 5e-16
ref|XP_004292299.1| PREDICTED: gypsy retrotransposon integrase-l... 89 1e-15
emb|CAN69925.1| hypothetical protein VITISV_027208 [Vitis vinifera] 87 8e-15
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] 86 1e-14
ref|XP_004292235.1| PREDICTED: uncharacterized protein LOC101310... 86 1e-14
ref|XP_004308743.1| PREDICTED: uncharacterized protein LOC101305... 86 2e-14
emb|CAN67556.1| hypothetical protein VITISV_018419 [Vitis vinifera] 85 2e-14
ref|XP_004296026.1| PREDICTED: uncharacterized protein LOC101306... 85 3e-14
emb|CAN83791.1| hypothetical protein VITISV_031681 [Vitis vinifera] 84 5e-14
ref|XP_004295940.1| PREDICTED: uncharacterized protein LOC101299... 83 9e-14
gb|AAX96029.1| retrotransposon protein, putative, unclassified [... 83 9e-14
emb|CAN61771.1| hypothetical protein VITISV_041899 [Vitis vinifera] 83 9e-14
ref|XP_004306172.1| PREDICTED: uncharacterized protein LOC101308... 83 1e-13
emb|CAN79562.1| hypothetical protein VITISV_020822 [Vitis vinifera] 83 1e-13
emb|CAN82830.1| hypothetical protein VITISV_005334 [Vitis vinifera] 82 1e-13
gb|AAF03460.1|AC009992_2 putative reverse transcriptase, 5' part... 82 1e-13
>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
Length = 1307
Score = 103 bits (256), Expect = 8e-20
Identities = 49/126 (38%), Positives = 74/126 (58%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
+V+G++ VLPIE +PT T N N E L L+L+EE RD +L +A Y ++++
Sbjct: 1173 LVYGSEAVLPIEAVVPTFRTATFNPVENEEGLKASLDLVEESRDTARLNLAVYQNRMRRA 1232
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
++ + R + VGD VL+K + K G + NWEGPY+V EE++P TY+L D
Sbjct: 1233 YNHRVHKRDLRVGDLVLRKSTATNKGNIHGKMTTNWEGPYKVVEEMRPGTYRLTDMEGVP 1292
Query: 363 LLRSWN 380
L+ WN
Sbjct: 1293 LMSHWN 1298
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 97.1 bits (240), Expect = 6e-18
Identities = 48/127 (37%), Positives = 74/127 (58%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
+ FG + V+P E+G+ T T+ + N E + L L+LLEE+R+ +A+ ++V +
Sbjct: 1732 LAFGHEAVIPAEIGVGTHRTEYFIEEQNDEQICLSLDLLEERREGAAQKVAQCQQRVMRY 1791
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
++K++R R GD VL++V+ NT+N G L WEGPY+V P YKL R
Sbjct: 1792 YNKNVRVRQFRAGDWVLRRVNQNTRNPNHGALGPKWEGPYRVIRATGPGAYKLAYQDGRD 1851
Query: 363 LLRSWNA 383
+ RSWNA
Sbjct: 1852 VKRSWNA 1858
>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
Length = 1106
Score = 94.4 bits (233), Expect = 4e-17
Identities = 46/128 (35%), Positives = 74/128 (57%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
M +G + V+P+E+G PTL + N+ N + L LN +EE+R+ + + Y +K+K+
Sbjct: 972 MTYGMEAVIPLELGFPTLKFDQYNNVTNHDMLHDSLNTIEERREVASVKMGSYQQKLKQA 1031
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
+DK ++ R + GD VL+KV +N G L NWEGPY++T Y+L+D R
Sbjct: 1032 YDKGVKSRPLVPGDLVLRKVVGTARNPAWGKLGTNWEGPYRITSVAGIGAYRLEDLDGRV 1091
Query: 363 LLRSWNAH 386
+ R WN +
Sbjct: 1092 VHRPWNVN 1099
>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 92.8 bits (229), Expect = 1e-16
Identities = 50/130 (38%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQR--LNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVK 176
+V+G K V+P E+ +P L LN K N L L+ + E+RDQ + I Y
Sbjct: 1150 LVYGMKAVVPAELNVPGLRRTEAPLNEKENSAMLDDSLDTINERRDQALIQIQNYQHAAA 1209
Query: 177 KRFDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATE 356
+ ++ ++ R VGD VLK+V N K G L INWEGPY VTE ++ Y+LKD +
Sbjct: 1210 RYYNSKVKSRPFFVGDYVLKRVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVYRLKDLED 1269
Query: 357 RQLLRSWNAH 386
R + R WN +
Sbjct: 1270 RPVQRPWNVN 1279
>ref|XP_004298151.1| PREDICTED: uncharacterized protein LOC101300244 [Fragaria vesca
subsp. vesca]
Length = 629
Score = 90.5 bits (223), Expect = 5e-16
Identities = 48/126 (38%), Positives = 73/126 (57%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
M FGT+ VLPIE IP+ + N+ N E L L+++L+EEKR + L Y ++V +
Sbjct: 500 MAFGTEVVLPIETSIPSGRVKNFNATTNEEGLHLNIDLIEEKRKRADLHNQVYKQRVARH 559
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
++ +R R++ +GD V+KK+ L+ NWEGPY++ EE+ P T L+D
Sbjct: 560 YNNKVRTRTLGLGDWVMKKIMTK-----PAALDPNWEGPYEIVEEVGPATLFLRDQDGIV 614
Query: 363 LLRSWN 380
RSWN
Sbjct: 615 TGRSWN 620
>ref|XP_004292299.1| PREDICTED: gypsy retrotransposon integrase-like protein 1-like
[Fragaria vesca subsp. vesca]
Length = 282
Score = 89.4 bits (220), Expect = 1e-15
Identities = 46/127 (36%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
+ FGT+ V+PIE+ + + + N N E L LDL+L+EEKRD+ L Y +++ +
Sbjct: 153 LAFGTEAVIPIELTVLSGRVEGYNEDTNAEGLQLDLDLIEEKRDRVDLHNQVYKQRIARH 212
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVL-NINWEGPYQVTEELKPRTYKLKDATER 359
+D +RP+S+ +GD V+K+V +TQ + + WEGPY++ EE+ P T+ L+D
Sbjct: 213 YDSKVRPQSLGLGDWVMKRV------MTQPIAHDSTWEGPYEIVEEVGPATFYLRDRDGI 266
Query: 360 QLLRSWN 380
WN
Sbjct: 267 VTGHPWN 273
>emb|CAN69925.1| hypothetical protein VITISV_027208 [Vitis vinifera]
Length = 982
Score = 86.7 bits (213), Expect = 8e-15
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLN-SKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKK 179
+ +G V+P E+G+PT+ T S AN E L +L+ +E R+ T + +A+Y ++
Sbjct: 848 LAYGMDAVIPTEIGLPTIRTDAAKQSDANTE-LGRNLDWADEVRESTTIRMADYQQRASA 906
Query: 180 RFDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATER 359
+++ ++PRS G VL+KV NT + G L NWEGPY V++ + Y L+ E
Sbjct: 907 HYNRKVKPRSFKNGTLVLRKVFENTAEMGVGKLQANWEGPYIVSKASESGAYHLQKLDET 966
Query: 360 QLLRSWN 380
LLR WN
Sbjct: 967 PLLRPWN 973
>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 86.3 bits (212), Expect = 1e-14
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQR--LNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVK 176
+V+G + V+P E+ +P L LN + N L L+ + E+RDQ + I Y +
Sbjct: 967 LVYGMEAVVPAELNVPGLRRTEAPLNEEENSAMLNDSLDTINERRDQALIRIQNYQQAAA 1026
Query: 177 KRFDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATE 356
+ ++ ++ R VGD VL++V N K G L INWEGPY +TE ++ Y+LKD +
Sbjct: 1027 RYYNSKVKSRPFFVGDYVLRRVFDNKKEEGAGKLGINWEGPYIITEVVRNGVYRLKDLED 1086
Query: 357 RQLLRSWN 380
+ R WN
Sbjct: 1087 NPVKRPWN 1094
>ref|XP_004292235.1| PREDICTED: uncharacterized protein LOC101310195 [Fragaria vesca
subsp. vesca]
Length = 130
Score = 85.9 bits (211), Expect = 1e-14
Identities = 45/126 (35%), Positives = 73/126 (57%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
M FGT+ VLPIE IP+ + ++ N E L L+++L+EEKR++ L Y ++V +
Sbjct: 1 MAFGTEAVLPIETSIPSGRVKNFDATTNGEGLRLNIDLIEEKRERADLHNQVYKQRVARH 60
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
++ +R R++ +GD V+KK+ L+ +WEGPY + EE+ P T+ L+D
Sbjct: 61 YNHRVRTRTLGLGDWVMKKIMTK-----PAALDPSWEGPYVILEEVGPATFFLRDQDGIV 115
Query: 363 LLRSWN 380
R WN
Sbjct: 116 TGRPWN 121
>ref|XP_004308743.1| PREDICTED: uncharacterized protein LOC101305805 [Fragaria vesca
subsp. vesca]
Length = 196
Score = 85.5 bits (210), Expect = 2e-14
Identities = 43/126 (34%), Positives = 72/126 (57%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
+ FGT+ VLPIE IP+ + ++ N E L L++NL+EE+R++ L Y ++V +
Sbjct: 67 LAFGTEAVLPIETSIPSRRVENFDATTNEEGLQLNINLIEERRERADLHNQVYKQRVARH 126
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
++ +R R++ + D V+KK+ T L+ WEG Y++ EE+ P T+ L+D
Sbjct: 127 YNSKVRTRTLGLRDWVMKKIMTKTAG-----LDPTWEGLYEIVEEVGPTTFFLRDQDGVD 181
Query: 363 LLRSWN 380
R WN
Sbjct: 182 TERPWN 187
>emb|CAN67556.1| hypothetical protein VITISV_018419 [Vitis vinifera]
Length = 970
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/126 (32%), Positives = 66/126 (52%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
+ +G ++P E+G+PT+ T L +L+ +E R+ + +A+Y ++
Sbjct: 836 LAYGMDAIIPTEIGLPTIRTDAAKQNDANTELGRNLDWADEVRESVAIRMADYQQRASAH 895
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
+D+ +RPRS G VL+KV NT + G NWEGPY V++ + Y L+ E
Sbjct: 896 YDRKVRPRSFKNGTLVLRKVFENTAEVGAGKFQANWEGPYIVSKASESGAYHLQKLDETP 955
Query: 363 LLRSWN 380
LLR WN
Sbjct: 956 LLRPWN 961
>ref|XP_004296026.1| PREDICTED: uncharacterized protein LOC101306711 [Fragaria vesca
subsp. vesca]
Length = 520
Score = 84.7 bits (208), Expect = 3e-14
Identities = 43/131 (32%), Positives = 71/131 (54%)
Frame = +3
Query: 9 FGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKRFD 188
+GT+ V+P+E+ +P+ + + N L L+++LLEE++D+ L +K+ K ++
Sbjct: 393 YGTEAVIPVEMEVPSERVTTYDPETNTTGLRLNMDLLEERQDRAHLRYINKKQKIAKHYN 452
Query: 189 KSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQLL 368
K PR + VGD V+K+V P+ L WEGP ++ P T+ L+D R L
Sbjct: 453 KKFIPRPLKVGDWVMKEVIPHPTG-----LKAKWEGPLEIVNASGPATFYLRDTDGRVLP 507
Query: 369 RSWNAHATFLH 401
R WNA L+
Sbjct: 508 RPWNARHLHLY 518
>emb|CAN83791.1| hypothetical protein VITISV_031681 [Vitis vinifera]
Length = 968
Score = 84.0 bits (206), Expect = 5e-14
Identities = 41/126 (32%), Positives = 66/126 (52%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
+ +G V+P E+G+PT+ T L +L+ +E R+ + +A+Y ++
Sbjct: 834 LAYGMNAVIPTEIGLPTIRTDAAKQDDASAELGRNLDWADEVRENAAIRMADYQQRASAH 893
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
+++ +RPRS G VL+KV NT ++ G NWEGPY V++ Y L+ E
Sbjct: 894 YNRKVRPRSFKNGTLVLRKVFENTTEVSAGKFQANWEGPYIVSKASDNGAYHLQKLDETP 953
Query: 363 LLRSWN 380
LLR WN
Sbjct: 954 LLRPWN 959
>ref|XP_004295940.1| PREDICTED: uncharacterized protein LOC101299568 [Fragaria vesca
subsp. vesca]
Length = 380
Score = 83.2 bits (204), Expect = 9e-14
Identities = 43/126 (34%), Positives = 72/126 (57%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
M FGT+ VLPIE IP+ + ++ N E L L+++ ++EKR++ L Y ++V +
Sbjct: 251 MAFGTEAVLPIETSIPSGRVENFDATTNEEGLRLNIDFIKEKRERADLHNQVYKQRVARH 310
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
++ + ++ +GD V+KK+ T L+ NWE PY++ EE+ P T+ L+D
Sbjct: 311 YNNKVSTITLGLGDWVMKKIMTKTV-----ALDPNWERPYEIVEEVGPTTFFLRDQDGIV 365
Query: 363 LLRSWN 380
RSWN
Sbjct: 366 TGRSWN 371
>gb|AAX96029.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77549917|gb|ABA92714.1| transposon
protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1058
Score = 83.2 bits (204), Expect = 9e-14
Identities = 40/126 (31%), Positives = 74/126 (58%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
+V+G++ +LP E+ + QR + E + D+NLLEE R++ + A Y + +++
Sbjct: 920 LVYGSEAMLPTELRHQSTRVQRYYDEEQEEQRSDDVNLLEEHRERVAVRAASYQQALRRY 979
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
++K ++ R++ +GD VL++V + L+ WEGPY +T+ L+P +K+ D R+
Sbjct: 980 YEKRIKARTLSIGDYVLRRVQSQAGH---NKLSPKWEGPYMITQVLRPGAFKIADVDGRE 1036
Query: 363 LLRSWN 380
L SWN
Sbjct: 1037 LANSWN 1042
>emb|CAN61771.1| hypothetical protein VITISV_041899 [Vitis vinifera]
Length = 852
Score = 83.2 bits (204), Expect = 9e-14
Identities = 41/126 (32%), Positives = 66/126 (52%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
+ +G V+P E+G+PT+ T L +L+ +E R+ + +A+Y ++
Sbjct: 718 LAYGMDAVIPTEIGLPTIRTDATKQNDANTELGRNLDWADEVRESATIRMADYQQRASAH 777
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATERQ 362
+D+ +RPRS+ G VL+KV NT + G NWEGPY V++ + Y L+
Sbjct: 778 YDRRVRPRSLKNGTLVLRKVFENTAEVGAGKFQANWEGPYIVSKASESGAYHLQKLDGTP 837
Query: 363 LLRSWN 380
LLR WN
Sbjct: 838 LLRPWN 843
>ref|XP_004306172.1| PREDICTED: uncharacterized protein LOC101308605 [Fragaria vesca
subsp. vesca]
Length = 159
Score = 82.8 bits (203), Expect = 1e-13
Identities = 44/115 (38%), Positives = 70/115 (60%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKKR 182
M FGT+ VLPIE IP + ++ N E L L+++L+EEKR++ L Y ++V +
Sbjct: 51 MAFGTEAVLPIETSIPLGRVENFDATTN-EGLRLNIDLIEEKRERADLHNQVYKQRVARH 109
Query: 183 FDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKD 347
+D +R R++ +GD V+KK+ T VL+ WEG Y++ EE+ P T+ L+D
Sbjct: 110 YDSKVRARTLGLGDWVMKKIMTKT-----AVLDPTWEGLYKIIEEVGPATFFLRD 159
>emb|CAN79562.1| hypothetical protein VITISV_020822 [Vitis vinifera]
Length = 1027
Score = 82.8 bits (203), Expect = 1e-13
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQRLN-SKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKK 179
+ +G V+P E+G+PT+ T N S AN+E L +L+ +E R+ + +A+Y ++
Sbjct: 893 LAYGMDAVIPTEIGLPTIRTNAANQSDANME-LGRNLDWADEVRESAAIRMADYQQRASA 951
Query: 180 RFDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATER 359
+++ +RPRS G VL+KV NT + G NWEGPY V++ Y L+
Sbjct: 952 HYNRKVRPRSFKNGTLVLRKVFENTTEVGAGKFQANWEGPYIVSKANDNGAYHLQKLDGT 1011
Query: 360 QLLRSWN 380
LLR WN
Sbjct: 1012 PLLRPWN 1018
>emb|CAN82830.1| hypothetical protein VITISV_005334 [Vitis vinifera]
Length = 873
Score = 82.4 bits (202), Expect = 1e-13
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQR-LNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVKK 179
+ +G ++PIE+G+PT+ T+ AN E L +L+ +E R+ + +A+Y ++
Sbjct: 739 LAYGMNAIIPIEIGLPTIRTEAGKQDDANAE-LGRNLDWADEVRESASIRMADYQQRASA 797
Query: 180 RFDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATER 359
+++ +RPRS G VL+KV NT + G NWEGPY V++ + Y L+
Sbjct: 798 HYNRKVRPRSFKNGTQVLRKVFENTIEIGAGKFQANWEGPYIVSKTSESGAYHLQKLDGT 857
Query: 360 QLLRSWN 380
LLR WN
Sbjct: 858 PLLRPWN 864
>gb|AAF03460.1|AC009992_2 putative reverse transcriptase, 5' partial [Arabidopsis thaliana]
Length = 177
Score = 82.4 bits (202), Expect = 1e-13
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Frame = +3
Query: 3 MVFGTKGVLPIEVGIPTLHTQR--LNSKANVESLALDLNLLEEKRDQTQLCIAEY*RKVK 176
+V+G + V+P ++ +P L LN N L L+ + E+RDQ + I Y +
Sbjct: 41 LVYGMEAVVPAKLNVPGLRRTEAPLNEDENSAMLDDSLDTINERRDQALIRIQNYQQAAA 100
Query: 177 KRFDKSMRPRSIHVGD*VLKKVSPNTKNLTQGVLNINWEGPYQVTEELKPRTYKLKDATE 356
+ ++ + R +GD VLK+V N K G L INWEGPY VTE ++ + LKD +
Sbjct: 101 RYYNSKINSRPFFMGDYVLKRVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVFGLKDLED 160
Query: 357 RQLLRSWN 380
R + R WN
Sbjct: 161 RPVKRPWN 168