BLASTX nr result

ID: Cocculus23_contig00037432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00037432
         (340 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [A...   157   2e-36
emb|CBI40707.3| unnamed protein product [Vitis vinifera]              115   8e-24
emb|CBI31112.3| unnamed protein product [Vitis vinifera]              114   2e-23
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   104   1e-20
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...    88   1e-15
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]    88   1e-15

>ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [Amborella trichopoda]
           gi|548853889|gb|ERN11849.1| hypothetical protein
           AMTR_s00020p00100020 [Amborella trichopoda]
          Length = 85

 Score =  157 bits (396), Expect = 2e-36
 Identities = 75/84 (89%), Positives = 77/84 (91%)
 Frame = -1

Query: 274 MRYPPVFWFPLGLPCSQVDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTH 95
           MR PPVFWFPLGLPCSQVDP A RKGDLVLYS DL PTEA KLPSCP+SHSVNRKGKPTH
Sbjct: 1   MRCPPVFWFPLGLPCSQVDPNAVRKGDLVLYSDDLLPTEACKLPSCPKSHSVNRKGKPTH 60

Query: 94  PSAPLVDAVRFYEASKHSSLALIH 23
           PSAPLVDAV FYEASKHSSLALI+
Sbjct: 61  PSAPLVDAVWFYEASKHSSLALIN 84


>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  115 bits (287), Expect = 8e-24
 Identities = 54/59 (91%), Positives = 54/59 (91%)
 Frame = +3

Query: 99  VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGGYRI 275
           VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTGGY I
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGGYHI 573


>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score =  114 bits (284), Expect = 2e-23
 Identities = 54/58 (93%), Positives = 55/58 (94%)
 Frame = +3

Query: 150  LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGGYRIGQKTIQKAKAHPASSK 323
            LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQK GGYRIGQKTIQKAKAHPA  +
Sbjct: 1775 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKMGGYRIGQKTIQKAKAHPAEGR 1832


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score =  104 bits (260), Expect = 1e-20
 Identities = 50/55 (90%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
 Frame = +3

Query: 105  FPFRFTECDLGHDGSLRASVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGNQKTGG 266
            FPFRFTECDLGHDG LRASVGKRSPEYSTRSP FLAAMGSTC+QGKPNGNQK  G
Sbjct: 957  FPFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQKREG 1011


>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
           gi|355477358|gb|AES58561.1| hypothetical protein
           MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/48 (85%), Positives = 42/48 (87%)
 Frame = -1

Query: 205 RKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHPSAPLVDAVRF 62
           +KGDLVLYSG  FPTEARK PSCPRSHSVNRKGKPTHPSAPLVD   F
Sbjct: 89  KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGF 136


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 50/87 (57%), Positives = 57/87 (65%), Gaps = 11/87 (12%)
 Frame = -1

Query: 250 FPLGLPCSQ-----------VDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGK 104
           +P+GL  S            VDPMAARKGDLVLYSGDLFPTEARKLPSC +      KG+
Sbjct: 94  YPIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLFPTEARKLPSCTQITFRESKGE 153

Query: 103 PTHPSAPLVDAVRFYEASKHSSLALIH 23
                +    +VRFYEASKHSSLALI+
Sbjct: 154 AYSSISSSRRSVRFYEASKHSSLALIN 180


Top