BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00037172
         (742 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546945.2| PREDICTED: putative pentatricopeptide repeat...   135   2e-29
ref|XP_007150636.1| hypothetical protein PHAVU_005G169000g [Phas...   132   2e-28
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ...   130   5e-28
ref|XP_004486752.1| PREDICTED: putative pentatricopeptide repeat...   129   1e-27
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...   129   1e-27
emb|CBI36131.3| unnamed protein product [Vitis vinifera]              129   1e-27
gb|EMT01370.1| hypothetical protein F775_14713 [Aegilops tauschii]    124   5e-26
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]    121   2e-25
ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containi...   120   5e-25
ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containi...   119   9e-25
ref|XP_002516017.1| pentatricopeptide repeat-containing protein,...   118   2e-24
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...   117   3e-24
gb|EXB74521.1| hypothetical protein L484_026217 [Morus notabilis]     117   6e-24
ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containi...   116   7e-24
ref|XP_004500471.1| PREDICTED: pentatricopeptide repeat-containi...   115   2e-23
ref|XP_002513372.1| pentatricopeptide repeat-containing protein,...   115   2e-23
ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containi...   114   3e-23
ref|XP_002322407.2| hypothetical protein POPTR_0015s14630g [Popu...   114   3e-23
ref|XP_007219319.1| hypothetical protein PRUPE_ppa019039mg [Prun...   113   6e-23
ref|XP_006859052.1| hypothetical protein AMTR_s00068p00189110 [A...   113   8e-23

>ref|XP_003546945.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 640

 Score =  135 bits (339), Expect = 2e-29
 Identities = 80/219 (36%), Positives = 123/219 (56%), Gaps = 8/219 (3%)
 Frame = +1

Query: 109 SSSSIPNRRANKRFKSSLNFYQSNPPKTITLYDHSSNSIEKAIQSQVEIDALAKS----- 273
           S SSI   +   R  S L+F  +  P +   + H S + +   Q +V+    + S     
Sbjct: 11  SFSSIRKTQETSRILSILSFSLNLFPVSPYYFLHQSFATQLIPQHKVDSFPSSPSNHYYY 70

Query: 274 ---LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPK 444
              LE   +  +L+ G +LHARL  LG++ ++ L++KL++FY     +  A  +FD +PK
Sbjct: 71  ASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPK 130

Query: 445 ALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGW 624
              N F WN +IRAY  +  +E AI L+ QM+  G KP+ FT PFVLKACS    +  G 
Sbjct: 131 G--NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGR 188

Query: 625 EIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
            IH  ++ +G++R++F  +AL+D+Y KCGC  DA  +FD
Sbjct: 189 VIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFD 227



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 49/156 (31%), Positives = 81/156 (51%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  +A  ++ EG  +H R+I  G   DV++ + L+  Y K G V  AR +FD +     
Sbjct: 175 LKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDR-- 232

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+M+ AY  +   ++++ L  +M   G +P E T   V+ + +    +  G EIH
Sbjct: 233 DAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIH 292

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G    +G+Q      +AL+D+Y KCG    AC LF+
Sbjct: 293 GFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFE 328


>ref|XP_007150636.1| hypothetical protein PHAVU_005G169000g [Phaseolus vulgaris]
           gi|561023900|gb|ESW22630.1| hypothetical protein
           PHAVU_005G169000g [Phaseolus vulgaris]
          Length = 631

 Score =  132 bits (331), Expect = 2e-28
 Identities = 79/220 (35%), Positives = 119/220 (54%), Gaps = 1/220 (0%)
 Frame = +1

Query: 85  HHPFVLTSSSSSIPNRRANKRFKSSLNF-YQSNPPKTITLYDHSSNSIEKAIQSQVEIDA 261
           H   +   S  SI   +   R  S+L+F ++   P+   LY      ++    S      
Sbjct: 3   HFYLMNVMSFCSIRKTQETSRILSTLSFSFKIFQPRL--LYHSLHAQVQSFPSSPSNHYC 60

Query: 262 LAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVP 441
            A  LE   +  +L+ G +LHARL  LG++ +  L++KL++FY     +  A  +FD +P
Sbjct: 61  YASLLESCISLKALRPGKQLHARLCQLGIAYNQDLATKLVNFYSVCNSLRNAHQLFDQIP 120

Query: 442 KALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFG 621
           K   N F WN +IRAY  +  +E AI L+ QM+  G KP+ FT PFVLKACS    +  G
Sbjct: 121 KG--NLFLWNVLIRAYAWNGPHEVAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEG 178

Query: 622 WEIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
             IH  ++  G++R++F  +AL+D+Y KCGC  DA  +FD
Sbjct: 179 RIIHERVIRTGWERDVFVGAALVDMYAKCGCVVDARHVFD 218



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 48/156 (30%), Positives = 81/156 (51%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  +A  ++ EG  +H R+I  G   DV++ + L+  Y K G V  AR +FD + +   
Sbjct: 166 LKACSALSTIGEGRIIHERVIRTGWERDVFVGAALVDMYAKCGCVVDARHVFDKIAER-- 223

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+M+ AY  +   ++++ L  +M     +P E T   V+ + +    +  G EIH
Sbjct: 224 DAVLWNSMLAAYSQNGHPDESLSLCREMAATSVRPTEATLVTVISSSADIACLPHGREIH 283

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G    +G+Q      +AL+D+Y KCG    AC LF+
Sbjct: 284 GFGWRHGFQSNDKVKTALIDMYAKCGSVEVACILFE 319


>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486783|gb|AES67986.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  130 bits (327), Expect = 5e-28
 Identities = 70/198 (35%), Positives = 111/198 (56%)
 Frame = +1

Query: 148 FKSSLNFYQSNPPKTITLYDHSSNSIEKAIQSQVEIDALAKSLEQFAATFSLKEGTKLHA 327
           F  S +FY S       L  H + S++               L+    + +L  G +LHA
Sbjct: 19  FPFSQSFYHS-------LATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHA 71

Query: 328 RLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTMIRAYVDSARY 507
           +  HLG++ +  L++KL+H Y     +  AR++FD +PK   N F WN +IR Y  +  +
Sbjct: 72  QFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQ--NLFLWNVLIRGYAWNGPH 129

Query: 508 EDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGYQRELFATSAL 687
           ++AI L+ +M+  G +P+ FT PFVLKACS    +  G  IH  ++ +G++R+LF  +AL
Sbjct: 130 DNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAAL 189

Query: 688 LDLYVKCGCFWDACKLFD 741
           +D+Y KCGC  DA ++FD
Sbjct: 190 IDMYAKCGCVMDAGRVFD 207



 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 46/156 (29%), Positives = 80/156 (51%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  +A  ++ EG  +H  +I  G   D+++ + L+  Y K G V  A  +FD +   + 
Sbjct: 155 LKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKI--VVR 212

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+M+ AY  +   +++I L  +M   G +P E T   V+ + +    + +G EIH
Sbjct: 213 DAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIH 272

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G    +G+Q      +AL+D+Y KCG    A  LF+
Sbjct: 273 GFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFE 308


>ref|XP_004486752.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cicer arietinum]
          Length = 615

 Score =  129 bits (324), Expect = 1e-27
 Identities = 67/170 (39%), Positives = 97/170 (57%)
 Frame = +1

Query: 232 AIQSQVEIDALAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVD 411
           A Q  +  D     L+   A+ +L  G +LHA   HLGL  +  L++KL+H Y     + 
Sbjct: 35  ANQQSLTTDCYTSLLQSCIASKALNPGKQLHAHFCHLGLPYNQNLATKLVHLYSVSNSLI 94

Query: 412 AARSIFDAVPKALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKA 591
            A ++FD +PK   N F WN +IR Y  +  ++ AI L+  M+    KP+ FT PFVLKA
Sbjct: 95  NAHNLFDKIPKG--NLFLWNVLIRGYAWNGPHDAAISLYHDMLDYELKPDNFTLPFVLKA 152

Query: 592 CSVHGLVEFGWEIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           CS    V  G  IH  ++ NG++R++F  +AL+D+Y KCGC  DA  +FD
Sbjct: 153 CSALSAVGEGKRIHEYVIKNGWERDVFVGAALIDMYAKCGCVIDARYVFD 202



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 48/156 (30%), Positives = 81/156 (51%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  +A  ++ EG ++H  +I  G   DV++ + L+  Y K G V  AR +FD +   + 
Sbjct: 150 LKACSALSAVGEGKRIHEYVIKNGWERDVFVGAALIDMYAKCGCVIDARYVFDKI--LVR 207

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+M+ AY  +   ++++ L  +M   G +P E T   V+ + +    +  G EIH
Sbjct: 208 DDVLWNSMLAAYAQNGHPDESLSLCREMAATGVRPTEATLVTVISSSADIACLPNGREIH 267

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G    +G+Q      +AL+D+Y KCG    A  LFD
Sbjct: 268 GFSWKHGFQSNDKVKTALIDMYAKCGYVKVARALFD 303


>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  129 bits (323), Expect = 1e-27
 Identities = 71/211 (33%), Positives = 115/211 (54%)
 Frame = +1

Query: 109 SSSSIPNRRANKRFKSSLNFYQSNPPKTITLYDHSSNSIEKAIQSQVEIDALAKSLEQFA 288
           +S S+  +  N  F SS   + +N      +   S+   E    +    +  A  L+   
Sbjct: 28  ASLSLQYQSPNPSFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSN-YASLLQSCI 86

Query: 289 ATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFW 468
           A  ++K G +LHA++   G   D  +++KL++ Y     + +AR +FD +PK   N F W
Sbjct: 87  ARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKH--NIFLW 144

Query: 469 NTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVV 648
           N +IR Y  +  YE A++L+ QM   G  P+ FT+PFVLKAC+    +E G EIH  +V 
Sbjct: 145 NVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQ 204

Query: 649 NGYQRELFATSALLDLYVKCGCFWDACKLFD 741
            G+++++F  +AL+D+Y KCGC   A ++FD
Sbjct: 205 TGWEKDVFVGAALIDMYAKCGCVGSAREVFD 235



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 44/156 (28%), Positives = 81/156 (51%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  AA  +++ G ++H  ++  G   DV++ + L+  Y K G V +AR +FD +   + 
Sbjct: 183 LKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI--LVR 240

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+M+ AY  +   +  + L S+M+  G +P E T    + A + +  +  G E+H
Sbjct: 241 DAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELH 300

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G+     ++      +AL+D+Y KCG    A  LF+
Sbjct: 301 GLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFE 336



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/128 (29%), Positives = 60/128 (46%)
 Frame = +1

Query: 262 LAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVP 441
           L  ++   A   +L +G +LH         S   + + L+  Y K G V  AR++F+ + 
Sbjct: 280 LVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERL- 338

Query: 442 KALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFG 621
             +     WN MI  Y       +A++LF +M  +  KP+  T+  VL ACS  GL+E G
Sbjct: 339 -GVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEG 396

Query: 622 WEIHGMMV 645
           W     M+
Sbjct: 397 WMFFETMI 404


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  129 bits (323), Expect = 1e-27
 Identities = 71/211 (33%), Positives = 115/211 (54%)
 Frame = +1

Query: 109 SSSSIPNRRANKRFKSSLNFYQSNPPKTITLYDHSSNSIEKAIQSQVEIDALAKSLEQFA 288
           +S S+  +  N  F SS   + +N      +   S+   E    +    +  A  L+   
Sbjct: 28  ASLSLQYQSPNPSFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSN-YASLLQSCI 86

Query: 289 ATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFW 468
           A  ++K G +LHA++   G   D  +++KL++ Y     + +AR +FD +PK   N F W
Sbjct: 87  ARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKH--NIFLW 144

Query: 469 NTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVV 648
           N +IR Y  +  YE A++L+ QM   G  P+ FT+PFVLKAC+    +E G EIH  +V 
Sbjct: 145 NVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQ 204

Query: 649 NGYQRELFATSALLDLYVKCGCFWDACKLFD 741
            G+++++F  +AL+D+Y KCGC   A ++FD
Sbjct: 205 TGWEKDVFVGAALIDMYAKCGCVGSAREVFD 235



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAV-PKAL 450
           L+  AA  +++ G ++H  ++  G   DV++ + L+  Y K G V +AR +FD +  +  
Sbjct: 183 LKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDA 242

Query: 451 LNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEI 630
           +    WN MI  Y       +A++LF +M  +  KP+  T+  VL ACS  GL+E GW  
Sbjct: 243 VLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMF 301

Query: 631 HGMMV 645
              M+
Sbjct: 302 FETMI 306


>gb|EMT01370.1| hypothetical protein F775_14713 [Aegilops tauschii]
          Length = 637

 Score =  124 bits (310), Expect = 5e-26
 Identities = 78/220 (35%), Positives = 112/220 (50%), Gaps = 6/220 (2%)
 Frame = +1

Query: 100 LTSSSSSIPNRRANKR-----FKSSLNFYQSNPPKT-ITLYDHSSNSIEKAIQSQVEIDA 261
           + S S + P+   ++R       SSL    + PP T I L     ++      S      
Sbjct: 5   ILSKSRNAPSPAGHRRHLRRLLSSSLGRATTFPPTTAIALSPPPPSTNSHLASSPHSYHR 64

Query: 262 LAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVP 441
            A  L+   A  SL+ G KLH RL+  GL  D  LS+KL+  Y   G V  AR +FD +P
Sbjct: 65  YASILQSCVAAGSLRAGRKLHGRLLVSGLGPDTVLSTKLVDLYAACGHVGQARRLFDGMP 124

Query: 442 KALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFG 621
           K   N F WN +IRAY      E A++L+  M   G +P+ FTYP VLKAC+    +E G
Sbjct: 125 KR--NVFLWNVLIRAYAREGPREAAVQLYRGMAEHGVEPDNFTYPLVLKACAALLDLETG 182

Query: 622 WEIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
            E+H  +    + +++F  + ++D+Y KCGC  DA  +FD
Sbjct: 183 REVHEHVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFD 222



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 45/156 (28%), Positives = 75/156 (48%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  AA   L+ G ++H  +       DV++ + ++  Y K G VD AR++FD +  A+ 
Sbjct: 170 LKACAALLDLETGREVHEHVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGI--AVR 227

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+MI AY  + R  +A+ L   M   G  P   T    + A +    +  G E+H
Sbjct: 228 DAVVWNSMIAAYGQNGRPMEALSLCRDMASNGVGPTIATLVSTISAAADAAALPRGRELH 287

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G     G+  +    ++L+D+Y K G    A  LF+
Sbjct: 288 GFGWRRGFGGQDKLKTSLVDMYAKSGWLHVARVLFE 323



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
 Frame = +1

Query: 253 IDALAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFD 432
           I  L  ++   A   +L  G +LH      G      L + L+  Y K G +  AR +F+
Sbjct: 264 IATLVSTISAAADAAALPRGRELHGFGWRRGFGGQDKLKTSLVDMYAKSGWLHVARVLFE 323

Query: 433 AVPKALLNQFFWNTMIRAYVDSARYEDAIELFSQMIF-LGFKPNEFTYPFVLKACSVHGL 609
            + K  L    WN MI  Y      ++A+ELF++M       P+  T+  VL AC+  G+
Sbjct: 324 QLMKRELVS--WNAMICGYGMHGHADEALELFNKMRGDAQVTPDNITFVGVLSACNHRGM 381

Query: 610 VEFGWEIHGMMV-VNGYQRELFATSALLDLYVKCGCFWDACKL 735
           VE   E  G+MV V+  +  +   + L+D+    G F +A  L
Sbjct: 382 VEEAKEFFGLMVDVSSIEPTVQHYTCLVDVLGHTGRFEEAYDL 424


>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  121 bits (304), Expect = 2e-25
 Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
 Frame = +1

Query: 130 RRANKRFKSSLNFYQSNPPKTITLYDHSSNSIEKAIQSQVEIDALAKS-LEQFAATFSLK 306
           RR  +   SSL   ++ PP T         S    + S         S L+   A+ SL+
Sbjct: 20  RRLRRLLSSSLGTARALPPNTGFAASPPPPSTNPRLASSPHAYHHHTSILQSCVASGSLR 79

Query: 307 EGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTMIRA 486
            G +LH RL+  GL  D  LS+KL+  Y   G V  AR +FD +PK   N F WN +IRA
Sbjct: 80  AGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR--NVFLWNVLIRA 137

Query: 487 YVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGYQRE 666
           Y      E A+ L+  M+  G +P+ FTYP VLKAC+    +E G E+H  +    + ++
Sbjct: 138 YAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQD 197

Query: 667 LFATSALLDLYVKCGCFWDACKLFD 741
           +F  + ++D+Y KCGC  DA  +FD
Sbjct: 198 VFVCAGVVDMYAKCGCVDDARAVFD 222



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 46/156 (29%), Positives = 76/156 (48%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  AA   L+ G ++H R+       DV++ + ++  Y K G VD AR++FD +  A+ 
Sbjct: 170 LKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGI--AVR 227

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+MI AY  + R  +A+ L   M   G  P   T    + A +    +  G E+H
Sbjct: 228 DAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELH 287

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G     G+  +    ++L+D+Y K G    A  LF+
Sbjct: 288 GFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFE 323


>ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Citrus sinensis]
          Length = 644

 Score =  120 bits (301), Expect = 5e-25
 Identities = 73/220 (33%), Positives = 119/220 (54%), Gaps = 8/220 (3%)
 Frame = +1

Query: 106 SSSSSIPNRRANKR-FKSSLNFY----QSNP---PKTITLYDHSSNSIEKAIQSQVEIDA 261
           SS +S+ N + NK  F S  N++    Q NP   P+   L   SS+ +      Q++   
Sbjct: 18  SSFTSLLNYQKNKNPFLSHYNYHSQAIQQNPNTDPRNTLL---SSSKVSNIPTHQIQ-SY 73

Query: 262 LAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVP 441
               L+   A  ++  G ++HA +  +G      L++KL+H Y     +  A  +FD +P
Sbjct: 74  YGSLLQSCIAQKAVSPGKQIHALISQMGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP 133

Query: 442 KALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFG 621
           +   N F WN +IRAY  +  YE AIEL+ +++ +G  P+ FT+PF LKACS    +E G
Sbjct: 134 QR--NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 191

Query: 622 WEIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
             IH  ++ N ++ ++F  +AL+D+Y KC C  +A ++FD
Sbjct: 192 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 231



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 48/157 (30%), Positives = 86/157 (54%)
 Frame = +1

Query: 271 SLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKAL 450
           +L+  +A  +++EG ++H  +I     +DV++ + L+  Y K   V  AR +FD + +  
Sbjct: 178 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER- 236

Query: 451 LNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEI 630
            +   WN+MI AY  + + +++IEL  +MI  G KP+E T   V+ A +    +  G E+
Sbjct: 237 -DVVVWNSMIAAYGQNGQADESIELCREMILTGLKPSEATLVTVISASTDIAALPQGREL 295

Query: 631 HGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           HG    + ++  +   +AL+D+Y KCG    A  LF+
Sbjct: 296 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 332


>ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  119 bits (299), Expect = 9e-25
 Identities = 63/156 (40%), Positives = 91/156 (58%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+   A+ SL  G +LH RL+  GL  D  L++KL+  Y   G V  AR +FD +PK   
Sbjct: 69  LQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKR-- 126

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           N F WN +IRAY     +E AI+L+  M+  G +P+ FTYP  LKAC+    +E G E+H
Sbjct: 127 NVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVH 186

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
             ++   +  ++F  + L+D+Y KCGC  DA  +FD
Sbjct: 187 ERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFD 222



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 46/157 (29%), Positives = 78/157 (49%)
 Frame = +1

Query: 271 SLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKAL 450
           +L+  AA   L+ G ++H R++      D+++ + L+  Y K G VD AR++FD +   +
Sbjct: 169 ALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRI--RV 226

Query: 451 LNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEI 630
            +   WN+MI AY  + R  +A+ L   M   G  P   T    + A +    +  G E+
Sbjct: 227 RDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGREL 286

Query: 631 HGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           HG     G+ R+    ++L+D+Y K G    A  LF+
Sbjct: 287 HGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFE 323



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
 Frame = +1

Query: 253 IDALAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFD 432
           I  L  ++   A   +L  G +LH      G      L + L+  Y K G V  AR +F+
Sbjct: 264 IATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFE 323

Query: 433 AVPKALLNQFFWNTMIRAYVDSARYEDAIELFSQM-IFLGFKPNEFTYPFVLKACSVHGL 609
            + K  L    WN MI  Y     +++A++LF++M +     P+  T+  VL AC+  G+
Sbjct: 324 QLMKRELVS--WNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGM 381

Query: 610 VEFGWEIHGMMV-VNGYQRELFATSALLDLYVKCGCFWDACKL 735
           V+   E  G+MV V   +  +   + L+D+    G F +A  L
Sbjct: 382 VKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDL 424


>ref|XP_002516017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544922|gb|EEF46437.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score =  118 bits (295), Expect = 2e-24
 Identities = 60/147 (40%), Positives = 91/147 (61%)
 Frame = +1

Query: 298 SLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTM 477
           +L  G +LHA L H+GL  D  L+ KL++ Y     +  AR +FD +PK   N F WN +
Sbjct: 102 ALIPGKQLHASLCHVGLQFDRVLAPKLVNLYCICNSLCEARLLFDKIPKR--NLFLWNVL 159

Query: 478 IRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGY 657
           IR Y     YE +I+L+ ++   G  P+ FT+PFVLKACS    +E G  IH  ++ +G+
Sbjct: 160 IRGYAWYGPYEASIQLYYKIFDYGLVPDNFTFPFVLKACSALSAIEDGRLIHEQVMRSGW 219

Query: 658 QRELFATSALLDLYVKCGCFWDACKLF 738
           +R++F  +AL+D+Y KCGC  +A ++F
Sbjct: 220 ERDVFVGAALIDMYSKCGCVDNAREVF 246



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 44/156 (28%), Positives = 81/156 (51%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  +A  ++++G  +H +++  G   DV++ + L+  Y K G VD AR +F   P  + 
Sbjct: 195 LKACSALSAIEDGRLIHEQVMRSGWERDVFVGAALIDMYSKCGCVDNAREVFHKFP--VR 252

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+M+ AY  + + + ++ L S+M+  G +P E T   V+ A +    +  G E+H
Sbjct: 253 DAVLWNSMLAAYSQNGKPDKSLALCSEMVLAGVRPTEATLVTVISASADIAALPQGRELH 312

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G      ++      + L+D+Y KCG    A  LF+
Sbjct: 313 GFAWRRRFESNDKVKTTLIDMYAKCGTMKVAQNLFE 348


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  117 bits (294), Expect = 3e-24
 Identities = 61/159 (38%), Positives = 95/159 (59%)
 Frame = +1

Query: 265 AKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPK 444
           A  L+      +++ G +LHAR+  +G+S +  L++KL++ Y     +  A  +FD + K
Sbjct: 5   ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK 64

Query: 445 ALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGW 624
              N F WN MIR Y  +  YE AI L+ QM   G  P++FT+PFVLKACS    +E G 
Sbjct: 65  R--NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGK 122

Query: 625 EIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           +IH  ++ +G + ++F  +AL+D+Y KCGC   A ++FD
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFD 161



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 50/156 (32%), Positives = 88/156 (56%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  +A  +++EG K+H  +I  GL SDV++ + L+  Y K G V++AR +FD + +   
Sbjct: 109 LKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDER-- 166

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+M+  Y  + + ++++ L   M F G KP E T+   + A + +GL+  G E+H
Sbjct: 167 DVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELH 226

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G    +G++      +AL+D+Y K G    A  LF+
Sbjct: 227 GYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFE 262


>gb|EXB74521.1| hypothetical protein L484_026217 [Morus notabilis]
          Length = 651

 Score =  117 bits (292), Expect = 6e-24
 Identities = 57/148 (38%), Positives = 90/148 (60%)
 Frame = +1

Query: 298 SLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTM 477
           ++K G +LH+ L  +GL  + +L++KL++ Y   G +  A  +FD +PK   N F WN +
Sbjct: 92  AIKPGKQLHSHLCQMGLGFNTFLATKLVNMYCVCGSLWNAHHLFDRIPKR--NLFLWNVL 149

Query: 478 IRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGY 657
           IR Y  +  YE AI L++QM   G  P+ +T+PFVLKACS    +E G +IH  +V    
Sbjct: 150 IRGYAWNGPYEVAIALYNQMFDCGLVPDRYTFPFVLKACSALSAIEVGRKIHERVVYTMC 209

Query: 658 QRELFATSALLDLYVKCGCFWDACKLFD 741
           + +++  +AL+D+Y KC C   A ++FD
Sbjct: 210 ETDVYVGAALIDMYAKCCCPQSARRVFD 237



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 45/156 (28%), Positives = 84/156 (53%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  +A  +++ G K+H R+++    +DVY+ + L+  Y K     +AR +FD + +   
Sbjct: 185 LKACSALSAIEVGRKIHERVVYTMCETDVYVGAALIDMYAKCCCPQSARRVFDKIEER-- 242

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+M+ AY  +   ++++ L S+M+  G +P E T   V+ A +    +  G E+H
Sbjct: 243 DAVLWNSMLAAYTQNGHPDESLALCSEMVLAGLRPTEATLVTVISASADIVALPAGKELH 302

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G  + NG++      +AL+D+Y K G    A  LF+
Sbjct: 303 GFSLRNGFESNDKVKTALVDMYAKSGSVKVARTLFE 338


>ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Solanum lycopersicum]
          Length = 606

 Score =  116 bits (291), Expect = 7e-24
 Identities = 60/159 (37%), Positives = 92/159 (57%)
 Frame = +1

Query: 265 AKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPK 444
           A  L+   A  +++ G +LHA L   GL  ++ L++KL++ Y     +  A  +FD +PK
Sbjct: 37  ASLLQSCIARKAVQPGKQLHAHLCLTGLGYNINLATKLVNLYCVCDKLPNAHHLFDRIPK 96

Query: 445 ALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGW 624
              N F WN +IR Y  +  YE AI L+ QMI  G  P+ FT+PFVLKACS    +E G 
Sbjct: 97  G--NIFLWNVLIRGYAWNGPYEAAISLYHQMIDYGHVPDNFTFPFVLKACSALSAIEVGK 154

Query: 625 EIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           +IH       + +++F  +AL+D+Y KCGC   + ++F+
Sbjct: 155 DIHDYAKRTKWDKDVFVGAALIDMYAKCGCVGRSREVFE 193



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 42/156 (26%), Positives = 72/156 (46%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  +A  +++ G  +H          DV++ + L+  Y K G V  +R +F+ V +   
Sbjct: 141 LKACSALSAIEVGKDIHDYAKRTKWDKDVFVGAALIDMYAKCGCVGRSREVFENVVER-- 198

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+M+ AY  +   ED + L  +M   G +P E T    + A +    +  G E+H
Sbjct: 199 DVVVWNSMLAAYSQNGHPEDCLALCGEMACGGIRPTEATLVTAISASADVAALRQGRELH 258

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G     G+       +AL+D+Y K G    A  LF+
Sbjct: 259 GYSWRQGFDSLDKVKTALVDMYAKSGSVKVARILFE 294


>ref|XP_004500471.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cicer arietinum]
          Length = 520

 Score =  115 bits (287), Expect = 2e-23
 Identities = 77/246 (31%), Positives = 125/246 (50%), Gaps = 20/246 (8%)
 Frame = +1

Query: 64  MASSSTAHHPFVLTSSSSSIPNRRANK-------RFKSSLNFYQSNP----------PKT 192
           +A+ S + +   L S+  S  N++  K       R K++ ++ Q NP          P+T
Sbjct: 2   IATPSISSNRMSLCSAKKSNDNKKLKKLRKWETQRRKNTFSYPQPNPTPLLIQQQPFPQT 61

Query: 193 -ITLYDHSSNSIEKAIQSQVEIDA--LAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVY 363
              + +   N +E +I+  + ID    A  LE      ++  G +LH  +    L  +V 
Sbjct: 62  KFQVLEQVLNDLEGSIEKGITIDTEIYASLLETCYRFQAINHGIRLHRLIPPTLLHRNVG 121

Query: 364 LSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTMIRAYVDSARYEDAIELFSQMIF 543
           +SSKL+  Y   G +D A  +FD + K  +  F WN++I  Y     Y+DAI L+ QM+ 
Sbjct: 122 ISSKLVRLYASFGHMDDAHDLFDQMTKRDMYAFPWNSLISGYAQLGLYDDAIALYFQMVE 181

Query: 544 LGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGYQRELFATSALLDLYVKCGCFWD 723
            G +P+ FT+P VLK C   G V+ G E+H  +V +G+  + F  +AL+D+Y KCG    
Sbjct: 182 EGVEPDLFTFPRVLKVCGGIGSVQVGEEVHRHIVRSGFGNDGFVLNALVDMYSKCGDIVK 241

Query: 724 ACKLFD 741
           A K+F+
Sbjct: 242 ARKVFN 247



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
 Frame = +1

Query: 199 LYDHSSNSIEKAIQSQVEIDALA--KSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSS 372
           LYD +     + ++  VE D     + L+      S++ G ++H  ++  G  +D ++ +
Sbjct: 168 LYDDAIALYFQMVEEGVEPDLFTFPRVLKVCGGIGSVQVGEEVHRHIVRSGFGNDGFVLN 227

Query: 373 KLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGF 552
            L+  Y K GD+  AR +F+ +P    +   WN+M+ AYV      +AI +F QM+  G 
Sbjct: 228 ALVDMYSKCGDIVKARKVFNKIP--FRDSVSWNSMLAAYVHHGLEVEAINIFRQMLLEGK 285

Query: 553 KPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACK 732
           +P+ F+   +L   S    ++ G +IHG ++  G +  L   ++L+ +Y   G    A  
Sbjct: 286 RPDFFSISVILTGVS---SLDVGVQIHGWVIRRGVEWNLSIANSLIVVYSNHGRLDKARS 342

Query: 733 LFD 741
           +F+
Sbjct: 343 IFN 345



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 40/144 (27%), Positives = 75/144 (52%)
 Frame = +1

Query: 298 SLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTM 477
           SL  G ++H  +I  G+  ++ +++ L+  Y   G +D ARSIF+ +P+   +   WN++
Sbjct: 301 SLDVGVQIHGWVIRRGVEWNLSIANSLIVVYSNHGRLDKARSIFNLMPER--DVVSWNSI 358

Query: 478 IRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGY 657
           I A+    ++ +AI  F +M   G  P++ T+  +L AC+  GLV+ G  +  +M     
Sbjct: 359 ISAH---CKHPEAIGYFEKMEEAGEVPDKITFVSLLSACAHLGLVKDGERLFALMC---- 411

Query: 658 QRELFATSALLDLYVKCGCFWDAC 729
             E +    +++ Y   GC  + C
Sbjct: 412 --EKYKIKPIMEHY---GCMVNLC 430


>ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547280|gb|EEF48775.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 597

 Score =  115 bits (287), Expect = 2e-23
 Identities = 63/158 (39%), Positives = 92/158 (58%)
 Frame = +1

Query: 268 KSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKA 447
           K L+    T  LK+G  +H+ +I  G  S+++LS+KL+ FY K G+   AR +FD +P+ 
Sbjct: 42  KILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPER 101

Query: 448 LLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWE 627
             N   W   I  Y  +  Y+DA+ +FSQM   G + N+FTY  VL+AC+    +E G +
Sbjct: 102 --NVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQ 159

Query: 628 IHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           IHG +  N +   LF  SAL+DL+ KCG   DA  LF+
Sbjct: 160 IHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFE 197



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
 Frame = +1

Query: 298 SLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDV-DAARSIFDAVPKALLNQFFWNT 474
           SL  G ++HA  I    S DV   + L+  Y K G++ DA R+ ++   K +++   W +
Sbjct: 356 SLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVIS---WTS 412

Query: 475 MIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVN- 651
           +I  Y       +AI L+ +M + G KPN+ T+  +L ACS  GL   GWE    M+   
Sbjct: 413 LITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKY 472

Query: 652 GYQRELFATSALLDLYVKCGCFWDA----CKL 735
                    S ++DL+ + G   +A    CK+
Sbjct: 473 NILPRAEHYSCMIDLFARGGQLEEAYNMICKM 504


>ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Solanum tuberosum]
          Length = 602

 Score =  114 bits (286), Expect = 3e-23
 Identities = 61/167 (36%), Positives = 93/167 (55%)
 Frame = +1

Query: 241 SQVEIDALAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAAR 420
           SQ      A  L+      +++ G +LHA L   GL  ++ L++KL++ Y     +  A 
Sbjct: 25  SQNPTQHYASLLQSCIGRKAVEPGKQLHAHLCLTGLGYNINLATKLVNLYSVCDKLPNAH 84

Query: 421 SIFDAVPKALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSV 600
            +FD +PK   N F WN +IR Y  +  YE AI L+ QMI  G  P+ FT+PFVLKACS 
Sbjct: 85  HLFDRIPKG--NIFLWNVLIRGYAWNGPYEAAISLYYQMIDYGHVPDNFTFPFVLKACSA 142

Query: 601 HGLVEFGWEIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
              +E G +IH       + +++F  +AL+D+Y KCGC   + ++F+
Sbjct: 143 LSAIEVGKDIHEYAKRTKWDKDVFVGAALIDMYAKCGCVGRSREVFE 189



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 42/156 (26%), Positives = 73/156 (46%)
 Frame = +1

Query: 274 LEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALL 453
           L+  +A  +++ G  +H          DV++ + L+  Y K G V  +R +F+ V +   
Sbjct: 137 LKACSALSAIEVGKDIHEYAKRTKWDKDVFVGAALIDMYAKCGCVGRSREVFEDVVER-- 194

Query: 454 NQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIH 633
           +   WN+M+ AY  +   ED ++L  +M   G +P E T    + A +    +  G E+H
Sbjct: 195 DVVVWNSMLAAYSQNGHPEDCLDLCGEMACGGVRPTEATLVTAISASADVAALRQGMELH 254

Query: 634 GMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           G     G+       +AL+D+Y K G    A  LF+
Sbjct: 255 GYSWRQGFDSLDKVKTALVDMYAKSGSVKVARILFE 290


>ref|XP_002322407.2| hypothetical protein POPTR_0015s14630g [Populus trichocarpa]
           gi|550322722|gb|EEF06534.2| hypothetical protein
           POPTR_0015s14630g [Populus trichocarpa]
          Length = 529

 Score =  114 bits (286), Expect = 3e-23
 Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 23/246 (9%)
 Frame = +1

Query: 73  SSTAHHPFVLTSSSS----SIPNRRANKRFKSSLN-----FYQSNP----------PKT- 192
           S T HH   +TS +S     +  +    +F+ +LN     F +S+P          P+T 
Sbjct: 14  SRTLHHYPSITSKTSRKKRELKEKHKQTQFQKNLNKRTLSFPKSSPTPLLINHRPPPQTQ 73

Query: 193 ITLYDHSSNSIEKAIQSQVEIDA--LAKSLEQFAATFSLKEGTKLHARLIHLGL-SSDVY 363
           +   ++    ++ +++  + ID    +  LE      +++ G K+H RLI + L   +  
Sbjct: 74  LEALENVIKDLQSSMEKGIRIDTQIFSSLLETCYRLNAIELGVKIH-RLIPINLLRRNAG 132

Query: 364 LSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTMIRAYVDSARYEDAIELFSQMIF 543
           +SSKL+  Y   GDV+ A  +FD + K   + F WN++I  Y +S  YEDA+ L+ QM  
Sbjct: 133 ISSKLVRLYSSCGDVEVAHQVFDEMFKRGESAFPWNSLIAGYTESGLYEDAMALYFQMEE 192

Query: 544 LGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGYQRELFATSALLDLYVKCGCFWD 723
            G +P++FT+P VLKAC   GL+  G  +H  +V  G+  + F  +AL+D+Y KCG    
Sbjct: 193 EGVEPDQFTFPRVLKACGGIGLIRIGEAVHRDLVRLGFVNDGFVLNALVDMYAKCGDIVK 252

Query: 724 ACKLFD 741
           A ++FD
Sbjct: 253 ARRIFD 258



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 34/133 (25%), Positives = 63/133 (47%)
 Frame = +1

Query: 301 LKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTMI 480
           ++ G  +H  L+ LG  +D ++ + L+  Y K GD+  AR IFD +     +   WN+M+
Sbjct: 215 IRIGEAVHRDLVRLGFVNDGFVLNALVDMYAKCGDIVKARRIFDKID--CKDSISWNSML 272

Query: 481 RAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGYQ 660
             Y+      +A+  F  M+  G + +      +L   S     E   +IHG +V  G +
Sbjct: 273 TGYIRHGLIAEALHTFHSMVHDGMELDSVAVSTILANVS---SFEVAVQIHGWIVRRGME 329

Query: 661 RELFATSALLDLY 699
            +    ++L+ +Y
Sbjct: 330 WDFSIANSLIAVY 342


>ref|XP_007219319.1| hypothetical protein PRUPE_ppa019039mg [Prunus persica]
           gi|462415781|gb|EMJ20518.1| hypothetical protein
           PRUPE_ppa019039mg [Prunus persica]
          Length = 519

 Score =  113 bits (283), Expect = 6e-23
 Identities = 75/228 (32%), Positives = 116/228 (50%), Gaps = 17/228 (7%)
 Frame = +1

Query: 109 SSSSIPNRR----ANKRFKSSLNFYQSNP-PKTITLYDHSS----------NSIEKAIQS 243
           SS S  N++    +  +  +SL+F ++ P P  I    HS           N +E AI  
Sbjct: 19  SSKSKKNKKQKQVSQNQSNNSLSFPKTIPTPLIICHKPHSQTKLQALDAVVNDLEAAIGK 78

Query: 244 QVEIDA--LAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAA 417
            + +D    A  LE      ++  G ++H  +    L  +V +SSKLL  Y   G ++ A
Sbjct: 79  GINVDTETFASLLETCYQFQAMDYGLRVHRLIPRSVLRRNVGISSKLLRLYASHGYIEEA 138

Query: 418 RSIFDAVPKALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACS 597
             +FD +PK  ++ F WN++I  Y +   YEDA+ L+ QM   G +P+ FT+P VLKAC 
Sbjct: 139 HQVFDEMPKRDVSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVEPDRFTFPRVLKACG 198

Query: 598 VHGLVEFGWEIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
             G ++ G  +H  +V  G   + F  +AL+D+Y KCG    A K+FD
Sbjct: 199 GIGFIQIGEAVHRHIVRLGLLNDRFVLNALVDMYAKCGDIVKARKVFD 246



 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 35/130 (26%), Positives = 65/130 (50%)
 Frame = +1

Query: 310 GTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTMIRAY 489
           G  +H  ++ LGL +D ++ + L+  Y K GD+  AR +FD +     +   WNTM+ +Y
Sbjct: 206 GEAVHRHIVRLGLLNDRFVLNALVDMYAKCGDIVKARKVFDKITSR--DHVSWNTMLTSY 263

Query: 490 VDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGYQREL 669
           +       A+++F +M+  G + +      +L A      +E   +IHG ++  G +  L
Sbjct: 264 MRHGLLSQALDIFHEMLHEGHQADSVAISTILGA--AESSLEIVIQIHGWVIRQGVEWNL 321

Query: 670 FATSALLDLY 699
              +AL+  Y
Sbjct: 322 SIANALIAAY 331


>ref|XP_006859052.1| hypothetical protein AMTR_s00068p00189110 [Amborella trichopoda]
           gi|548863164|gb|ERN20519.1| hypothetical protein
           AMTR_s00068p00189110 [Amborella trichopoda]
          Length = 1082

 Score =  113 bits (282), Expect = 8e-23
 Identities = 55/179 (30%), Positives = 103/179 (57%)
 Frame = +1

Query: 205 DHSSNSIEKAIQSQVEIDALAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLH 384
           D ++ S+   +QS    +  +K L + + + ++K G ++  ++I  G  +++ L + L++
Sbjct: 34  DKTAVSLSAIVQSAPSPNIFSKLLAELSRSKTIKPGLQIQTQIIKHGFLNEISLCNHLIN 93

Query: 385 FYYKIGDVDAARSIFDAVPKALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNE 564
            Y K    + A  +F+ + +  L    W  ++  +  +   ++AI+ F  M  LG K NE
Sbjct: 94  LYSKARHFEEAHKVFNEIHEPDLVS--WTAIVACFAQNGLGKEAIKAFCSMHKLGIKSNE 151

Query: 565 FTYPFVLKACSVHGLVEFGWEIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
           +TYP VLKAC + G +  G +IHG+++ NG+Q ++F  +AL+ +Y KCG  +DA +LFD
Sbjct: 152 YTYPSVLKACGIQGALRIGTQIHGVILSNGFQADIFVANALIVMYAKCGMTFDAQQLFD 210



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 50/147 (34%), Positives = 81/147 (55%)
 Frame = +1

Query: 301 LKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTMI 480
           L EG ++H  L+ LG   D + S+ L+  Y K  D++A+  +F+ + +  +    WN +I
Sbjct: 268 LCEGQRIHGYLVKLGFYDDPFSSNALVDMYAKTSDLEASERVFEKLSQPDI--ISWNALI 325

Query: 481 RAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGYQ 660
             +V    Y  A+EL  +M F G  PN FT   +LKACSV G+++ G +I+   + +G+ 
Sbjct: 326 AGFVLHGFYHKALELLEEMKFSGTSPNMFTLSSLLKACSVMGMLDLGMQINSFAIKSGFD 385

Query: 661 RELFATSALLDLYVKCGCFWDACKLFD 741
            ++F    L+D+Y KC     A K FD
Sbjct: 386 HDMFMCVGLIDMYSKCELVEYASKSFD 412



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 40/136 (29%), Positives = 80/136 (58%)
 Frame = +1

Query: 298 SLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVPKALLNQFFWNTM 477
           +L+ GT++H  ++  G  +D+++++ L+  Y K G    A+ +FD  P+  +    WN++
Sbjct: 166 ALRIGTQIHGVILSNGFQADIFVANALIVMYAKCGMTFDAQQLFDETPQTSVVS--WNSL 223

Query: 478 IRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFGWEIHGMMVVNGY 657
              Y  +   ++AI+LF +M+  G +P+EF+   ++ AC+    +  G  IHG +V  G+
Sbjct: 224 FSCYAQNGFSDEAIKLFREMVCTGIRPDEFSLSTIVNACTSSEDLCEGQRIHGYLVKLGF 283

Query: 658 QRELFATSALLDLYVK 705
             + F+++AL+D+Y K
Sbjct: 284 YDDPFSSNALVDMYAK 299



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 46/160 (28%), Positives = 81/160 (50%)
 Frame = +1

Query: 262 LAKSLEQFAATFSLKEGTKLHARLIHLGLSSDVYLSSKLLHFYYKIGDVDAARSIFDAVP 441
           L+  L+  +    L  G ++++  I  G   D+++   L+  Y K   V+ A   FD +P
Sbjct: 356 LSSLLKACSVMGMLDLGMQINSFAIKSGFDHDMFMCVGLIDMYSKCELVEYASKSFDCMP 415

Query: 442 KALLNQFFWNTMIRAYVDSARYEDAIELFSQMIFLGFKPNEFTYPFVLKACSVHGLVEFG 621
              L    WN +I  YV +   ++A+ LF  M+  G+  NE T   +LKA S    V+  
Sbjct: 416 YHDL--ISWNAIISGYVQNGNDKEALFLFLTMLNEGYSYNESTLCSLLKASSGLPTVDAT 473

Query: 622 WEIHGMMVVNGYQRELFATSALLDLYVKCGCFWDACKLFD 741
            +IH  +V +G++ +++  +++ D Y K  C  DA K+F+
Sbjct: 474 KQIHAHVVKSGFESDMYVMNSVTDAYCKSNCMEDARKIFE 513