BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00036997
         (1167 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   563   e-158
ref|XP_007215907.1| hypothetical protein PRUPE_ppa004160mg [Prun...   518   e-144
ref|XP_007023868.1| Pentatricopeptide repeat (PPR) superfamily p...   515   e-143
ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containi...   513   e-143
gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]     512   e-142
ref|XP_002305285.2| pentatricopeptide repeat-containing family p...   511   e-142
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   509   e-142
ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containi...   503   e-140
emb|CBI36294.3| unnamed protein product [Vitis vinifera]              503   e-140
ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containi...   490   e-136
ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi...   489   e-135
ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containi...   486   e-135
ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containi...   483   e-134
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi...   483   e-134
gb|EYU21622.1| hypothetical protein MIMGU_mgv1a019624mg, partial...   481   e-133
ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi...   476   e-132
ref|XP_007144700.1| hypothetical protein PHAVU_007G177800g [Phas...   474   e-131
ref|XP_004503476.1| PREDICTED: pentatricopeptide repeat-containi...   473   e-131
ref|XP_006842064.1| hypothetical protein AMTR_s00078p00045650 [A...   469   e-129
ref|XP_006392896.1| hypothetical protein EUTSA_v10011389mg [Eutr...   464   e-128

>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  563 bits (1451), Expect = e-158
 Identities = 265/377 (70%), Positives = 320/377 (84%), Gaps = 2/377 (0%)
 Frame = +2

Query: 41   LYSSQSPALNPSSLADE--VNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKRC 214
            L+SSQ+   +P+SL+    +NEI RILSDFR PHHDLE  L  FS KI+  LVEQVLKRC
Sbjct: 31   LFSSQTILQDPNSLSSSQYINEISRILSDFRDPHHDLERPLTAFSQKITPGLVEQVLKRC 90

Query: 215  KNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEISP 394
            KNLG SAHRF+LWA +LPGF HS+E++HILVDILGSSKQF LIWDF S MR++   EI P
Sbjct: 91   KNLGFSAHRFFLWAKRLPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICP 150

Query: 395  EMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFER 574
            E+FW++FRAYCRA+LP DAIRAF  M DFG+K G+ D+DQLLY+LCK+K V+  QEFF++
Sbjct: 151  EIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDK 210

Query: 575  VKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKA 754
            V  E  P+ KTYSILMRGW +VGDS EA KLF+EM +RGC++DV+A+N+LLE+LCKGG  
Sbjct: 211  VNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNV 270

Query: 755  DEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCI 934
            DEAYKLF+EMGS+ L P+AC+YSIFIRA CE ND+HSA +VLDRMRRYNL PNVFTYNCI
Sbjct: 271  DEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCI 330

Query: 935  LKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDGR 1114
            +K LCK+++V++AYQ+LDEM+ERGVSPD+WSYN IQAFHCDHCEVNKALR+I RMEK+  
Sbjct: 331  VKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENC 390

Query: 1115 MPDRHTYNMVLKMLIKV 1165
            MPDRHTYNMVLKML++V
Sbjct: 391  MPDRHTYNMVLKMLLRV 407



 Score =  108 bits (269), Expect = 6e-21
 Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 4/290 (1%)
 Frame = +2

Query: 302  LVDILGSSKQFALIWDFFSQMRDSGNDEISP--EMFWIVFRAYCRASLPTDAIRAFKNME 475
            L+ +L   K      +FF    D  N E+ P  + + I+ R +      ++A + F+ M 
Sbjct: 191  LLYVLCKRKHVKQAQEFF----DKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMR 246

Query: 476  DFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFERVKFE-FSPSPKTYSILMRGWCNVGDSV 652
            + G    +   + LL  LCK   V    + F  +     +P   +YSI +R +C V D  
Sbjct: 247  ERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIH 306

Query: 653  EAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFI 832
             A ++ D M +     +V  +N +++ LCK  K DEAY+L  EM    + P+  +Y+   
Sbjct: 307  SAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQ 366

Query: 833  RASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVS 1012
               C+  +V+ A+R++ RM + N  P+  TYN +LK+L +  R +    V   M ERG  
Sbjct: 367  AFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFY 426

Query: 1013 PDIWSYNV-IQAFHCDHCEVNKALRMIRRMEKDGRMPDRHTYNMVLKMLI 1159
            P   +Y V +  F     ++ +A +    M  DG  P   T  ++   +I
Sbjct: 427  PAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVI 476


>ref|XP_007215907.1| hypothetical protein PRUPE_ppa004160mg [Prunus persica]
            gi|462412057|gb|EMJ17106.1| hypothetical protein
            PRUPE_ppa004160mg [Prunus persica]
          Length = 526

 Score =  518 bits (1333), Expect = e-144
 Identities = 244/388 (62%), Positives = 308/388 (79%)
 Frame = +2

Query: 2    SNFSPHLSFQFQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKIS 181
            ++++P  S  +Q      SP L        VNEI RILSD R+ HHDLE +L+    +IS
Sbjct: 28   THYNPFSSLTYQNPPPPPSPHL--------VNEISRILSDHRNAHHDLEHSLNPLCTQIS 79

Query: 182  THLVEQVLKRCKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQ 361
            T+LVEQVLKRCKNLG+SAHRF+LWA  +PGF HS E++HIL++ILGSSKQ+A++WDF  +
Sbjct: 80   TNLVEQVLKRCKNLGLSAHRFFLWAKTIPGFQHSFESYHILIEILGSSKQYAVLWDFLIE 139

Query: 362  MRDSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKK 541
            +R+S   EI PE+FW++FR Y RA+LP DAIRAF  M +FG+KP + DLDQL+Y LCK+K
Sbjct: 140  VRESKCIEIVPEVFWLIFRVYSRANLPRDAIRAFNRMVEFGIKPSVLDLDQLMYTLCKRK 199

Query: 542  LVRYGQEFFERVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNT 721
             V+Y  EFF++VK  F  + K YSILMRGW ++GDS EA KLFDEMT+RGC +DV A+N+
Sbjct: 200  HVKYAHEFFDKVKSGFELNAKIYSILMRGWGDIGDSDEARKLFDEMTERGCLVDVPAYNS 259

Query: 722  LLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYN 901
             LE+LCKGGK DEAYK+F+ MGS+   P+ACTYSIFIRA CEAND+HS  RVLDRM+RYN
Sbjct: 260  YLEALCKGGKVDEAYKIFRGMGSNGTDPDACTYSIFIRAYCEANDIHSVFRVLDRMKRYN 319

Query: 902  LEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKAL 1081
            L PNV++YNCI+K LCKN +VE+AY++LDEM+ERGV PD WSYN IQA HCDHCEVN+AL
Sbjct: 320  LLPNVYSYNCIIKKLCKNDKVEEAYELLDEMIERGVMPDAWSYNAIQAHHCDHCEVNRAL 379

Query: 1082 RMIRRMEKDGRMPDRHTYNMVLKMLIKV 1165
            R++ RM+KD   PDRHTYNMVLK+LI++
Sbjct: 380  RLLSRMKKDNCKPDRHTYNMVLKLLIRI 407



 Score =  110 bits (274), Expect = 1e-21
 Identities = 66/232 (28%), Positives = 120/232 (51%), Gaps = 1/232 (0%)
 Frame = +2

Query: 347  DFFSQMRDSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYL 526
            +FF +++     E++ +++ I+ R +       +A + F  M + G    +   +  L  
Sbjct: 206  EFFDKVKSGF--ELNAKIYSILMRGWGDIGDSDEARKLFDEMTERGCLVDVPAYNSYLEA 263

Query: 527  LCKKKLVRYGQEFFERVKFEFS-PSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSID 703
            LCK   V    + F  +    + P   TYSI +R +C   D     ++ D M +     +
Sbjct: 264  LCKGGKVDEAYKIFRGMGSNGTDPDACTYSIFIRAYCEANDIHSVFRVLDRMKRYNLLPN 323

Query: 704  VIAHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLD 883
            V ++N +++ LCK  K +EAY+L  EM    + P+A +Y+      C+  +V+ A+R+L 
Sbjct: 324  VYSYNCIIKKLCKNDKVEEAYELLDEMIERGVMPDAWSYNAIQAHHCDHCEVNRALRLLS 383

Query: 884  RMRRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVI 1039
            RM++ N +P+  TYN +LKLL +  R + A +V + M ERG  P + +Y+V+
Sbjct: 384  RMKKDNCKPDRHTYNMVLKLLIRIGRFDRATEVWESMGERGFYPSVSTYSVM 435



 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 2/201 (0%)
 Frame = +2

Query: 419  AYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFERVK-FEFSP 595
            A C+     +A + F+ M   G  P        +   C+   +       +R+K +   P
Sbjct: 263  ALCKGGKVDEAYKIFRGMGSNGTDPDACTYSIFIRAYCEANDIHSVFRVLDRMKRYNLLP 322

Query: 596  SPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKADEAYKLF 775
            +  +Y+ +++  C      EA +L DEM +RG   D  ++N +    C   + + A +L 
Sbjct: 323  NVYSYNCIIKKLCKNDKVEEAYELLDEMIERGVMPDAWSYNAIQAHHCDHCEVNRALRLL 382

Query: 776  QEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCILKLLCKN 955
              M   + KP+  TY++ ++          A  V + M      P+V TY+ ++  LCK 
Sbjct: 383  SRMKKDNCKPDRHTYNMVLKLLIRIGRFDRATEVWESMGERGFYPSVSTYSVMIHGLCKK 442

Query: 956  Q-RVEDAYQVLDEMVERGVSP 1015
            + ++E+A +  + M++ G+ P
Sbjct: 443  KHKLEEACKYFEIMIDEGIPP 463


>ref|XP_007023868.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
            gi|508779234|gb|EOY26490.1| Pentatricopeptide repeat
            (PPR) superfamily protein [Theobroma cacao]
          Length = 520

 Score =  515 bits (1326), Expect = e-143
 Identities = 239/380 (62%), Positives = 305/380 (80%)
 Frame = +2

Query: 26   FQFQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVL 205
            F F +  + + P   P  LA+ V EI R+LSD R+PHHDL+ +L  FS  IST LVEQVL
Sbjct: 25   FLFFSSLTQEQPTSRP--LANLVTEISRVLSDHRNPHHDLDRSLTTFSSHISTQLVEQVL 82

Query: 206  KRCKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDE 385
            KRCKNLG SAHRF+LWA K+PGF HS +++HILVDILGSSKQFA++WD   ++RD    E
Sbjct: 83   KRCKNLGFSAHRFFLWAEKIPGFQHSDKSYHILVDILGSSKQFAILWDLLIEIRDGKQFE 142

Query: 386  ISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEF 565
            I+PE+FW+VFRAYCRA+LP DAIRAF  M +FG++P I D+DQLL++LCK+K V+  Q F
Sbjct: 143  INPEIFWVVFRAYCRANLPGDAIRAFDRMVEFGIRPSIHDVDQLLFVLCKRKHVKQAQGF 202

Query: 566  FERVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKG 745
            F+RVK EF PS K+YSIL+RGW ++G++ +A K+FDEM QRGCSIDV+A+N LLE+LCK 
Sbjct: 203  FDRVKHEFEPSAKSYSILVRGWGDIGEACQARKVFDEMVQRGCSIDVLAYNCLLEALCKS 262

Query: 746  GKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTY 925
            G  DEAYK+F  MGS  ++ +AC+YS+FIRA CEAND+H+A RVLDRMRRYNL PN+FTY
Sbjct: 263  GNVDEAYKMFGAMGSSRIELDACSYSVFIRAYCEANDIHAAFRVLDRMRRYNLVPNLFTY 322

Query: 926  NCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEK 1105
            NCI++ LC N +V++AYQ+L EM+ERG+SPD WSYN I A+HC+H EVN+AL +I RMEK
Sbjct: 323  NCIIRKLCNNDKVDEAYQLLTEMIERGISPDEWSYNAILAYHCEHSEVNRALNLISRMEK 382

Query: 1106 DGRMPDRHTYNMVLKMLIKV 1165
            +   PDRHTYNM LK+LI++
Sbjct: 383  NECFPDRHTYNMALKLLIRI 402



 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 2/288 (0%)
 Frame = +2

Query: 302  LVDILGSSKQFALIWDFFSQMRDSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDF 481
            L+ +L   K       FF +++     E S + + I+ R +        A + F  M   
Sbjct: 186  LLFVLCKRKHVKQAQGFFDRVKHEF--EPSAKSYSILVRGWGDIGEACQARKVFDEMVQR 243

Query: 482  GLKPGIDDLDQLLYLLCKKKLVRYGQEFFERV-KFEFSPSPKTYSILMRGWCNVGDSVEA 658
            G    +   + LL  LCK   V    + F  +          +YS+ +R +C   D   A
Sbjct: 244  GCSIDVLAYNCLLEALCKSGNVDEAYKMFGAMGSSRIELDACSYSVFIRAYCEANDIHAA 303

Query: 659  GKLFDEMTQRGCSIDVIAHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRA 838
             ++ D M +     ++  +N ++  LC   K DEAY+L  EM    + P+  +Y+  +  
Sbjct: 304  FRVLDRMRRYNLVPNLFTYNCIIRKLCNNDKVDEAYQLLTEMIERGISPDEWSYNAILAY 363

Query: 839  SCEANDVHSAMRVLDRMRRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPD 1018
             CE ++V+ A+ ++ RM +    P+  TYN  LKLL +  R + A ++ + M  RG  P 
Sbjct: 364  HCEHSEVNRALNLISRMEKNECFPDRHTYNMALKLLIRIGRFDRATELWESMANRGFYPS 423

Query: 1019 IWSYNVIQAFHC-DHCEVNKALRMIRRMEKDGRMPDRHTYNMVLKMLI 1159
            + +Y V+    C    ++ +A R    M  +G  P   T  ++   L+
Sbjct: 424  VSTYAVMIHGLCKKRGKLEEACRYFEIMIDEGIPPYSSTVELLRNRLL 471


>ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 734

 Score =  513 bits (1321), Expect = e-143
 Identities = 248/386 (64%), Positives = 300/386 (77%)
 Frame = +2

Query: 8    FSPHLSFQFQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTH 187
            F P  S   QT  S Q P L        VNEI RILSD R PHHDLE +L  +S +IS +
Sbjct: 168  FHPFSSLTHQTPPSPQLPHL--------VNEISRILSDHRDPHHDLELSLSSWSIQISPN 219

Query: 188  LVEQVLKRCKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMR 367
            LVEQVLKRCKNLG SAHRF+LWA  +PGF HS E+HHIL+DILGSS QFAL+WDF  +MR
Sbjct: 220  LVEQVLKRCKNLGFSAHRFFLWAKTVPGFQHSDESHHILIDILGSSGQFALLWDFLIEMR 279

Query: 368  DSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLV 547
            +S   EI PE+FW++FR Y RA+LP DAIRA+  M +FG+KP I DLD LLY LCK+K V
Sbjct: 280  ESKCCEIGPELFWVIFRVYSRANLPRDAIRAYSRMVEFGIKPSIHDLDHLLYTLCKRKHV 339

Query: 548  RYGQEFFERVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLL 727
            ++ QEFF++VK  F    KTYSILMRGW ++ DS  A KLFDEMT++GC +DV A+N+ L
Sbjct: 340  KHAQEFFDKVKSGFELGAKTYSILMRGWGDICDSDNARKLFDEMTEKGCLVDVPAYNSYL 399

Query: 728  ESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLE 907
            E+LCKGG  DEAYK+F+EMGS  ++P+A TYSIFIRA CEAND+HS   VLDRM+RYNL 
Sbjct: 400  EALCKGGNVDEAYKIFREMGSKGVEPDAGTYSIFIRAYCEANDIHSVFSVLDRMKRYNLL 459

Query: 908  PNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRM 1087
             NVFTYNC++K LCKN+RVE+AYQ+LDEM+E GV PD WSYN IQA+HC+H EVN+ALR+
Sbjct: 460  ANVFTYNCVIKKLCKNERVEEAYQLLDEMIEMGVKPDEWSYNAIQAYHCEHGEVNQALRL 519

Query: 1088 IRRMEKDGRMPDRHTYNMVLKMLIKV 1165
            + RMEKD  MPD HTYNMVLK+LI++
Sbjct: 520  LSRMEKDSCMPDHHTYNMVLKLLIRI 545


>gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]
          Length = 529

 Score =  512 bits (1319), Expect = e-142
 Identities = 245/384 (63%), Positives = 308/384 (80%), Gaps = 3/384 (0%)
 Frame = +2

Query: 23   SFQFQTLYSSQSPALN---PSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLV 193
            S   QTL+S  SPA+    P   AD VN++ R+LSD R+ H DLE +L  FS +IST+LV
Sbjct: 29   SSNLQTLHSFCSPAVQHPPPPPPADPVNDVSRVLSDRRNAHDDLEHSLAAFSTQISTNLV 88

Query: 194  EQVLKRCKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDS 373
            EQVLKRC+NLG SAHRF+LWA K+PGF HS E++HILVD+LGSSKQFA++WD    +R+S
Sbjct: 89   EQVLKRCQNLGFSAHRFFLWAKKIPGFEHSVESYHILVDVLGSSKQFAVMWDLLMDVRES 148

Query: 374  GNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRY 553
               EISPE+FWIVFRAYCRA+LP DAIRAF  M +FG+KP + DLDQLLY LCK+K V++
Sbjct: 149  KCCEISPEIFWIVFRAYCRANLPRDAIRAFNRMVEFGVKPCVHDLDQLLYALCKRKHVKH 208

Query: 554  GQEFFERVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLES 733
              EFF++VK  F PS KT+SIL+RGW ++GD+  A +LFDEM QRGC +DV+A+N+ LE+
Sbjct: 209  AHEFFDKVKGGFEPSVKTFSILIRGWGDLGDASHARELFDEMLQRGCFLDVLAYNSYLEA 268

Query: 734  LCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPN 913
            LCKGG ADEAY++F+ M    + P+ACTYS+FIR  CEAND+HS  RVLDRMRRY+L PN
Sbjct: 269  LCKGGSADEAYEIFRGMKEKGVSPDACTYSVFIRTYCEANDIHSVFRVLDRMRRYDLLPN 328

Query: 914  VFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIR 1093
            VFTYN I+K LCKN++V++AYQ+L+EM+E GV PD WSYN I AFHCDHCEV++ALR++ 
Sbjct: 329  VFTYNLIIKKLCKNEKVDEAYQLLEEMIENGVRPDSWSYNAILAFHCDHCEVHRALRLLS 388

Query: 1094 RMEKDGRMPDRHTYNMVLKMLIKV 1165
            RMEKD + PDRHTYNMVLK+LI +
Sbjct: 389  RMEKDCK-PDRHTYNMVLKLLIGI 411


>ref|XP_002305285.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550340729|gb|EEE85796.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 523

 Score =  511 bits (1316), Expect = e-142
 Identities = 235/373 (63%), Positives = 310/373 (83%)
 Frame = +2

Query: 47   SSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKRCKNLG 226
            S+ +P      L   VNEI RILSD R+PHHDLE++L+ FS +IST+LVEQVLKRCKNLG
Sbjct: 33   STLTPLNQIPPLPGLVNEISRILSDQRNPHHDLETSLNAFSSEISTNLVEQVLKRCKNLG 92

Query: 227  VSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEISPEMFW 406
             SAHRF+LWA ++PGF HS E++HILV+ILG+S+QFA++WDF  +MR+S + EI+ E+ W
Sbjct: 93   FSAHRFFLWAKRIPGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIW 152

Query: 407  IVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFERVKFE 586
            +VFR+Y RA+LP+DAIRAF  M +FGL+P +DDLD+LLY+LCK K V+  Q+FF+RVK +
Sbjct: 153  LVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK 212

Query: 587  FSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKADEAY 766
            F    KTYSIL+RGW ++G++VEA K+FDEM  RGC++DV+A+N+LLE+LCKGG  DEAY
Sbjct: 213  FEAKAKTYSILVRGWGDIGEAVEARKVFDEMLGRGCALDVLAYNSLLEALCKGGNVDEAY 272

Query: 767  KLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCILKLL 946
            K+F+E+GSH ++P+AC+Y+IFIRA CEAN++HS   VLDRM+RY+L PNVFTYNCI+K L
Sbjct: 273  KMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKL 332

Query: 947  CKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDGRMPDR 1126
            CKN +VEDAYQ+L EM+ERGVSPD WSYN I A+HC+H EVN+A ++I  M KD  +PDR
Sbjct: 333  CKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDR 392

Query: 1127 HTYNMVLKMLIKV 1165
            H+YNM+LK+L++V
Sbjct: 393  HSYNMLLKLLVRV 405


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  509 bits (1311), Expect = e-142
 Identities = 242/388 (62%), Positives = 312/388 (80%)
 Frame = +2

Query: 2    SNFSPHLSFQFQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKIS 181
            S FS  L+ +  TL SS +P        D VNEI RILSD R+PHHDLE +L  +S  IS
Sbjct: 15   SLFSYLLNSKSYTL-SSLAPRTKNLPSPDLVNEISRILSDHRNPHHDLELSLTTYSSHIS 73

Query: 182  THLVEQVLKRCKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQ 361
            T LVEQVLKRCKNLG SA RF+LWA ++PGF HS+E++HILVDILGSSKQFAL+WDF  +
Sbjct: 74   TTLVEQVLKRCKNLGFSAQRFFLWAKRIPGFDHSKESYHILVDILGSSKQFALLWDFLIE 133

Query: 362  MRDSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKK 541
            +R+S + EISP++FW+VFRAY RA+LP+DAIRAF  M +FGLKP IDDLDQLLY+LCK+K
Sbjct: 134  IRESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRK 193

Query: 542  LVRYGQEFFERVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNT 721
              ++ Q+ F+RVK +F    KTYSIL+RGW ++G+SV A K+FDEM ++ C++DV+A+N+
Sbjct: 194  HAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNS 253

Query: 722  LLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYN 901
            LLE+ CKGGK  EAYK+F+EMGS+ +KP+ACT+SIFIRA CEAND+H A RVLD M+RY+
Sbjct: 254  LLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYD 313

Query: 902  LEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKAL 1081
            L PNVFTYNC++K LCK ++VE+AYQ+L+E++ER   PD WSYN I A+HC+H EVN A 
Sbjct: 314  LVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSAT 373

Query: 1082 RMIRRMEKDGRMPDRHTYNMVLKMLIKV 1165
            R+I RM KD  +PD+H+YNM+LK+LI+V
Sbjct: 374  RLISRMVKDNCLPDKHSYNMLLKLLIRV 401



 Score =  103 bits (256), Expect = 2e-19
 Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 2/253 (0%)
 Frame = +2

Query: 407  IVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFERVKFE 586
            I+ R +        A + F  M +      +   + LL   CK   V    + F  +   
Sbjct: 218  ILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSN 277

Query: 587  -FSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKADEA 763
               P   T+SI +R +C   D   A ++ DEM +     +V  +N +++ LCK  K +EA
Sbjct: 278  GIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEA 337

Query: 764  YKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCILKL 943
            Y+L  E+     +P+A +Y+  +   CE ++V+SA R++ RM + N  P+  +YN +LKL
Sbjct: 338  YQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKL 397

Query: 944  LCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHC-DHCEVNKALRMIRRMEKDGRMP 1120
            L +  R + A +V + M E+G  P + +Y+V+    C    ++ +A +    M  +G  P
Sbjct: 398  LIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPP 457

Query: 1121 DRHTYNMVLKMLI 1159
               T  ++   LI
Sbjct: 458  YSSTVEILRNRLI 470


>ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Citrus sinensis]
          Length = 531

 Score =  503 bits (1296), Expect = e-140
 Identities = 236/366 (64%), Positives = 297/366 (81%)
 Frame = +2

Query: 68   NPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKRCKNLGVSAHRFY 247
            +P   AD V+EI R+LSD R PHHDLE +L+ F+PKIST+LVEQVLKRCKNLG SAHRF+
Sbjct: 48   DPPPSADLVSEISRVLSDHRDPHHDLELSLNTFTPKISTNLVEQVLKRCKNLGFSAHRFF 107

Query: 248  LWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEISPEMFWIVFRAYC 427
            LWA ++PGF HS  ++HILVDILGSSKQFAL+WDF  ++R++ + EI+PE+FWIVFRAY 
Sbjct: 108  LWAKRIPGFEHSAGSYHILVDILGSSKQFALLWDFLIEIRENQSFEINPEIFWIVFRAYA 167

Query: 428  RASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFERVKFEFSPSPKT 607
            RA+LP DAIRAF  M +FG+KP I DLDQLL+ LCK+K V+   +FF+ VK E +P+ KT
Sbjct: 168  RANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNVKHEITPTVKT 227

Query: 608  YSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKADEAYKLFQEMG 787
            YSIL+RG  +VG+  EA KLFDEM +R C +D++AHN+LLE++CK G  DEA+ + +EM 
Sbjct: 228  YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 287

Query: 788  SHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCILKLLCKNQRVE 967
            S   +P+A +YSIFI A CEAND+HS  RVLD M+RYNL PNVFTYNCI+K LCKN++VE
Sbjct: 288  SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIKKLCKNEKVE 347

Query: 968  DAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDGRMPDRHTYNMVL 1147
            +AYQ+LDEM+ERG +PD WSYN I A+HCDH EVN ALR+I RM K+  MPDRHTYNMVL
Sbjct: 348  EAYQLLDEMIERGANPDEWSYNAILAYHCDHAEVNMALRLITRMTKENVMPDRHTYNMVL 407

Query: 1148 KMLIKV 1165
            K+L++V
Sbjct: 408  KLLVRV 413



 Score = 99.4 bits (246), Expect = 3e-18
 Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
 Frame = +2

Query: 359  QMRDSGNDEISPEM--FWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLC 532
            Q  D+   EI+P +  + I+ R        ++A + F  M +      I   + LL  +C
Sbjct: 212  QFFDNVKHEITPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMC 271

Query: 533  KKKLVRYGQEFFERVK-FEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVI 709
            K   +         ++     P   +YSI +  +C   D     ++ D M +     +V 
Sbjct: 272  KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 331

Query: 710  AHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRM 889
             +N +++ LCK  K +EAY+L  EM      P+  +Y+  +   C+  +V+ A+R++ RM
Sbjct: 332  TYNCIIKKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDHAEVNMALRLITRM 391

Query: 890  RRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHC-DHCE 1066
             + N+ P+  TYN +LKLL +  R + A +V + M +RG  P + +Y+V+    C    +
Sbjct: 392  TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 451

Query: 1067 VNKALRMIRRMEKDGRMPDRHTYNMVLKMLI 1159
            + +A +    M  +G  P   T  M+   L+
Sbjct: 452  LEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 482


>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  503 bits (1294), Expect = e-140
 Identities = 245/377 (64%), Positives = 295/377 (78%), Gaps = 2/377 (0%)
 Frame = +2

Query: 41   LYSSQSPALNPSSLADE--VNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKRC 214
            L+SSQ+   +P+SL+    +NEI RILSDFR PHHDLE  L  FS KI+  LVEQVLKRC
Sbjct: 31   LFSSQTILQDPNSLSSSQYINEISRILSDFRDPHHDLERPLTAFSQKITPGLVEQVLKRC 90

Query: 215  KNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEISP 394
            KNLG SAH                           SSKQF LIWDF S MR++   EI P
Sbjct: 91   KNLGFSAH---------------------------SSKQFPLIWDFLSDMRETRCCEICP 123

Query: 395  EMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFER 574
            E+FW++FRAYCRA+LP DAIRAF  M DFG+K G+ D+DQLLY+LCK+K V+  QEFF++
Sbjct: 124  EIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDK 183

Query: 575  VKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKA 754
            V  E  P+ KTYSILMRGW +VGDS EA KLF+EM +RGC++DV+A+N+LLE+LCKGG  
Sbjct: 184  VNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNV 243

Query: 755  DEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCI 934
            DEAYKLF+EMGS+ L P+AC+YSIFIRA CE ND+HSA +VLDRMRRYNL PNVFTYNCI
Sbjct: 244  DEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCI 303

Query: 935  LKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDGR 1114
            +K LCK+++V++AYQ+LDEM+ERGVSPD+WSYN IQAFHCDHCEVNKALR+I RMEK+  
Sbjct: 304  VKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENC 363

Query: 1115 MPDRHTYNMVLKMLIKV 1165
            MPDRHTYNMVLKML++V
Sbjct: 364  MPDRHTYNMVLKMLLRV 380


>ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  490 bits (1262), Expect = e-136
 Identities = 229/376 (60%), Positives = 301/376 (80%)
 Frame = +2

Query: 38   TLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKRCK 217
            T +++++ A +  +L   V+EI RILSD R+PHHDLE  L  FS  +ST LVEQVLKRCK
Sbjct: 33   TSFATEARAGSDPTLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCK 92

Query: 218  NLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEISPE 397
            N+  SAHRF+LWA ++PGF  S +++HI+VDILGSS QFA++WDF  ++R++ +  I+ E
Sbjct: 93   NIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHE 152

Query: 398  MFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFERV 577
            +FW VF AY RA LP DAIRAF  M +FG++ G+DDLD+LLY LCK+K V + Q+FF++V
Sbjct: 153  LFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKV 212

Query: 578  KFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKAD 757
            K  F+PS KTYSIL RGW  VGDS  A K+FDEM +RGC IDV+A+N+LLE+LCKGGK D
Sbjct: 213  KSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRD 272

Query: 758  EAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCIL 937
            EAYK+F EM S+ + P+A TYSIFIR+SC+ ND+H+  RVL+R +R NL PNVFTYNC++
Sbjct: 273  EAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVI 332

Query: 938  KLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDGRM 1117
            K LCK+Q VE+AYQ+LDEM+ERGV+PD WSYN IQA+HCDH EVN AL +++RM++D  +
Sbjct: 333  KKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCV 392

Query: 1118 PDRHTYNMVLKMLIKV 1165
            PD+HTYNMVLK+L++V
Sbjct: 393  PDKHTYNMVLKLLVRV 408


>ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  489 bits (1258), Expect = e-135
 Identities = 228/376 (60%), Positives = 300/376 (79%)
 Frame = +2

Query: 38   TLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKRCK 217
            T +++++ A +  +L   V+EI RILSD R+PHHDLE  L  FS  +ST LVEQVLKRCK
Sbjct: 33   TSFATEARAGSDPTLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCK 92

Query: 218  NLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEISPE 397
            N+  SAHRF+LWA ++PGF  S +++HI+VDILG S QFA++WDF  ++R++ +  I+ E
Sbjct: 93   NIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHE 152

Query: 398  MFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFERV 577
            +FW VF AY RA LP DAIRAF  M +FG++ G+DDLD+LLY LCK+K V + Q+FF++V
Sbjct: 153  LFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKV 212

Query: 578  KFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKAD 757
            K  F+PS KTYSIL RGW  VGDS  A K+FDEM +RGC IDV+A+N+LLE+LCKGGK D
Sbjct: 213  KSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRD 272

Query: 758  EAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCIL 937
            EAYK+F EM S+ + P+A TYSIFIR+SC+ ND+H+  RVL+R +R NL PNVFTYNC++
Sbjct: 273  EAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVI 332

Query: 938  KLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDGRM 1117
            K LCK+Q VE+AYQ+LDEM+ERGV+PD WSYN IQA+HCDH EVN AL +++RM++D  +
Sbjct: 333  KKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCV 392

Query: 1118 PDRHTYNMVLKMLIKV 1165
            PD+HTYNMVLK+L++V
Sbjct: 393  PDKHTYNMVLKLLVRV 408


>ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Solanum tuberosum]
          Length = 550

 Score =  486 bits (1252), Expect = e-135
 Identities = 233/378 (61%), Positives = 291/378 (76%)
 Frame = +2

Query: 32   FQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKR 211
            F + ++       P    D VNEI RILSD+RSPHHD+ESAL+ FS  IST +VEQVLKR
Sbjct: 53   FMSSFTDAETKKEPEKNPDLVNEISRILSDYRSPHHDIESALNPFSGSISTDVVEQVLKR 112

Query: 212  CKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEIS 391
            CKNL  SAHRF++WA KL GF HSRE+ HILVDILGSSKQF LIWDF  +MR + + EI+
Sbjct: 113  CKNLEFSAHRFFIWAQKLSGFCHSRESFHILVDILGSSKQFPLIWDFLVEMRTNRSCEIT 172

Query: 392  PEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFE 571
            PE+F +VFRAY RA LP DAIRAF  M DFG+KP + DLD+LL  LCK+K  +  QEFF+
Sbjct: 173  PEIFLLVFRAYSRAGLPADAIRAFNKMVDFGIKPCLADLDKLLLALCKRKHAKQAQEFFD 232

Query: 572  RVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGK 751
            +VK +F PS KTYSIL+RGW ++G+  EA KLFDEM +RGCS+D++A+N++L+SLCK GK
Sbjct: 233  KVKDDFMPSVKTYSILIRGWGDLGEVAEAQKLFDEMLERGCSVDLLAYNSILDSLCKAGK 292

Query: 752  ADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNC 931
             DEA+  F +M S  L P+A +YSIFI   C AND+HS  RVLD+MRRY L PNVFTYNC
Sbjct: 293  MDEAFNFFMKMRSIGLIPDAFSYSIFIHGYCTANDIHSVFRVLDQMRRYKLVPNVFTYNC 352

Query: 932  ILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDG 1111
            I+K LCK ++V++AYQ++DEM+  GV PD WSYN I A HCDH EVN A R++ RME++ 
Sbjct: 353  IIKKLCKTKKVDEAYQLIDEMISEGVRPDCWSYNTILASHCDHNEVNLAHRLVSRMEQNN 412

Query: 1112 RMPDRHTYNMVLKMLIKV 1165
             +PD+HTYNM+LKMLI+V
Sbjct: 413  CLPDKHTYNMLLKMLIRV 430



 Score =  108 bits (271), Expect = 3e-21
 Identities = 70/273 (25%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
 Frame = +2

Query: 347  DFFSQMRDSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYL 526
            +FF +++D     +  + + I+ R +       +A + F  M + G    +   + +L  
Sbjct: 229  EFFDKVKDDFMPSV--KTYSILIRGWGDLGEVAEAQKLFDEMLERGCSVDLLAYNSILDS 286

Query: 527  LCKKKLVRYGQEFFERVK-FEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSID 703
            LCK   +     FF +++     P   +YSI + G+C   D     ++ D+M +     +
Sbjct: 287  LCKAGKMDEAFNFFMKMRSIGLIPDAFSYSIFIHGYCTANDIHSVFRVLDQMRRYKLVPN 346

Query: 704  VIAHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLD 883
            V  +N +++ LCK  K DEAY+L  EM S  ++P+  +Y+  + + C+ N+V+ A R++ 
Sbjct: 347  VFTYNCIIKKLCKTKKVDEAYQLIDEMISEGVRPDCWSYNTILASHCDHNEVNLAHRLVS 406

Query: 884  RMRRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNV-IQAFHCDH 1060
            RM + N  P+  TYN +LK+L +  R +   +V + M +R   P + +Y+V +  F    
Sbjct: 407  RMEQNNCLPDKHTYNMLLKMLIRVGRFDRVEKVWESMEDRNFYPSVSTYSVMVHGFCQKK 466

Query: 1061 CEVNKALRMIRRMEKDGRMPDRHTYNMVLKMLI 1159
             ++ +A +    M  +G  P   T   +   LI
Sbjct: 467  GKLEEACKYFEMMIDEGIPPYTETCEKLRNRLI 499


>ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Solanum lycopersicum]
          Length = 550

 Score =  483 bits (1243), Expect = e-134
 Identities = 230/373 (61%), Positives = 289/373 (77%)
 Frame = +2

Query: 47   SSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKRCKNLG 226
            + + P  NP    D VNE+ RILSD+RSPHHD+ESAL+ FS  +S  +VEQVLKRCKNLG
Sbjct: 62   TKKEPEKNP----DLVNEVSRILSDYRSPHHDIESALNPFSGSVSNDVVEQVLKRCKNLG 117

Query: 227  VSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEISPEMFW 406
             SAHRF++WA KL GF HSRE+  ILVDILGSSKQF LIWDF  +MR + + EI+PE+FW
Sbjct: 118  FSAHRFFIWAQKLSGFCHSRESFRILVDILGSSKQFPLIWDFLVEMRTNRSCEITPEIFW 177

Query: 407  IVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFERVKFE 586
            +VFRAY RA LP DAIRAF  M DFG+KP + DLD+LL  LCK+K  +  QEFF++VK +
Sbjct: 178  LVFRAYSRAGLPADAIRAFNKMVDFGIKPCLADLDKLLLALCKRKHAKQAQEFFDKVKDD 237

Query: 587  FSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKADEAY 766
            F PS KTYSIL+RGW ++G+  EA KLFDEM +RGCS+D++A+N++L+SLCK GK DEA+
Sbjct: 238  FMPSVKTYSILIRGWGDLGEVAEAQKLFDEMLERGCSVDLLAYNSILDSLCKAGKMDEAF 297

Query: 767  KLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCILKLL 946
              F +M S  L P+A +YSIFI   C  ND+HS  RVLD+MRRY L PNVFTYNCI+K L
Sbjct: 298  NFFMKMRSIGLIPDAFSYSIFIHGYCAGNDIHSVFRVLDQMRRYKLVPNVFTYNCIIKKL 357

Query: 947  CKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDGRMPDR 1126
            CK ++V++AYQ++DEM+  GV PD WSYN I A HCD  EVN A R++ RME++  +PD+
Sbjct: 358  CKTKKVDEAYQLIDEMINEGVRPDCWSYNTILASHCDQNEVNLAHRLVSRMEQNNCLPDK 417

Query: 1127 HTYNMVLKMLIKV 1165
            HTYNM+LKMLI+V
Sbjct: 418  HTYNMLLKMLIRV 430



 Score =  102 bits (254), Expect = 3e-19
 Identities = 69/273 (25%), Positives = 130/273 (47%), Gaps = 2/273 (0%)
 Frame = +2

Query: 347  DFFSQMRDSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYL 526
            +FF +++D     +  + + I+ R +       +A + F  M + G    +   + +L  
Sbjct: 229  EFFDKVKDDFMPSV--KTYSILIRGWGDLGEVAEAQKLFDEMLERGCSVDLLAYNSILDS 286

Query: 527  LCKKKLVRYGQEFFERVK-FEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSID 703
            LCK   +     FF +++     P   +YSI + G+C   D     ++ D+M +     +
Sbjct: 287  LCKAGKMDEAFNFFMKMRSIGLIPDAFSYSIFIHGYCAGNDIHSVFRVLDQMRRYKLVPN 346

Query: 704  VIAHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLD 883
            V  +N +++ LCK  K DEAY+L  EM +  ++P+  +Y+  + + C+ N+V+ A R++ 
Sbjct: 347  VFTYNCIIKKLCKTKKVDEAYQLIDEMINEGVRPDCWSYNTILASHCDQNEVNLAHRLVS 406

Query: 884  RMRRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNV-IQAFHCDH 1060
            RM + N  P+  TYN +LK+L +  R +   +V   M  R   P + +Y V +  F    
Sbjct: 407  RMEQNNCLPDKHTYNMLLKMLIRVGRFDRVEKVWKSMEGRNFYPSVSTYAVMVHGFCQKK 466

Query: 1061 CEVNKALRMIRRMEKDGRMPDRHTYNMVLKMLI 1159
             ++ +A +    M  +G  P   T   +   LI
Sbjct: 467  GKLEEACKYFEMMIDEGIPPYTETCEKLRNRLI 499


>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Glycine max]
          Length = 523

 Score =  483 bits (1243), Expect = e-134
 Identities = 225/378 (59%), Positives = 299/378 (79%)
 Frame = +2

Query: 32   FQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKR 211
            +   +S  +  ++ + L D VNEI R+LSD R PHHDLE +L+ FS ++ST+LVEQVLKR
Sbjct: 27   YHHFHSFPTSQVSGTLLPDLVNEISRLLSDHRYPHHDLELSLNPFSAQLSTNLVEQVLKR 86

Query: 212  CKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEIS 391
            CKNLG SAHRF+LWA  +PGF HS  + HILV+ILGS KQFA++WDF ++MR+S + EI+
Sbjct: 87   CKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEIN 146

Query: 392  PEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFE 571
             E+FW++FRAY +A+LP  AIR+F  M++FG+KP I DLD+LL++LCK+K V+  Q+ F 
Sbjct: 147  SEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFH 206

Query: 572  RVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGK 751
            + K  FS + KTYSIL+ GW  +GDS +A  LF  M ++GC +D++A+N LL++LCKGG+
Sbjct: 207  QAKNRFSLTAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGR 266

Query: 752  ADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNC 931
             DEA  +F +M S  ++P+A TYSIFI + C+A+DV SA RVLD+MRRYNL PNVFTYNC
Sbjct: 267  VDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNC 326

Query: 932  ILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDG 1111
            I+K LCKN+ VE+AYQ+LDEM+ RGV PD WSYN IQA+HCDHCEVN+ALR++ RMEKD 
Sbjct: 327  IIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDI 386

Query: 1112 RMPDRHTYNMVLKMLIKV 1165
             +PDRHTYNMVLK+LI++
Sbjct: 387  CLPDRHTYNMVLKLLIRI 404


>gb|EYU21622.1| hypothetical protein MIMGU_mgv1a019624mg, partial [Mimulus guttatus]
          Length = 510

 Score =  481 bits (1238), Expect = e-133
 Identities = 235/380 (61%), Positives = 300/380 (78%), Gaps = 6/380 (1%)
 Frame = +2

Query: 44   YSSQSPAL-----NPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLK 208
            +SSQS A+     NP S    VN++ RILSD+R P HD+ESAL  F+ ++S  LVE VLK
Sbjct: 15   FSSQSIAVHQTVSNPPS-PHLVNDLSRILSDYRKPQHDVESALAPFASQLSPTLVEHVLK 73

Query: 209  RCKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEI 388
            RCKNLG SAHRF+LWA  + GF HSR+++HILVDILGSS+QF  +WDF ++ + + + EI
Sbjct: 74   RCKNLGFSAHRFFLWAQSVAGFQHSRDSYHILVDILGSSRQFPFLWDFLTETKRTESCEI 133

Query: 389  SPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFF 568
            S E+FWIVFRAY RA+LP+DAIRAF  M D+G+ P +DDLDQLLY LCK+K V+  QEFF
Sbjct: 134  SREIFWIVFRAYSRANLPSDAIRAFNKMLDYGITPCVDDLDQLLYTLCKRKHVKQAQEFF 193

Query: 569  ERVKF-EFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKG 745
            ++VK  E  P+ K+YSILM+GW  +GDS EA KLFDEM +R  ++D++A N++L++LCKG
Sbjct: 194  DQVKGGELIPTVKSYSILMKGWGEIGDSGEAQKLFDEMLEREYTVDLLAWNSVLDALCKG 253

Query: 746  GKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTY 925
            GK DEAY+LFQ M +  L+P+A +YSIFIRASC  ND+HSA RVLD M+R NL PNVFTY
Sbjct: 254  GKVDEAYELFQGMRTKGLEPDAYSYSIFIRASCSENDIHSAFRVLDSMKRCNLAPNVFTY 313

Query: 926  NCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEK 1105
            NCI+K LCKN ++++AY++LDEM+ERGV PD WSYN + AFHCDH EVN AL++I RM+K
Sbjct: 314  NCIIKSLCKNNKIDEAYELLDEMLERGVKPDTWSYNTVLAFHCDHNEVNTALKLILRMDK 373

Query: 1106 DGRMPDRHTYNMVLKMLIKV 1165
            DG   DRHTYNMVLKMLI++
Sbjct: 374  DGCERDRHTYNMVLKMLIRI 393



 Score =  100 bits (249), Expect = 1e-18
 Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 4/275 (1%)
 Frame = +2

Query: 347  DFFSQMRDSGNDEISPEM--FWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLL 520
            +FF Q++     E+ P +  + I+ + +       +A + F  M +      +   + +L
Sbjct: 191  EFFDQVKGG---ELIPTVKSYSILMKGWGEIGDSGEAQKLFDEMLEREYTVDLLAWNSVL 247

Query: 521  YLLCKKKLVRYGQEFFERVKFE-FSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCS 697
              LCK   V    E F+ ++ +   P   +YSI +R  C+  D   A ++ D M +   +
Sbjct: 248  DALCKGGKVDEAYELFQGMRTKGLEPDAYSYSIFIRASCSENDIHSAFRVLDSMKRCNLA 307

Query: 698  IDVIAHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRV 877
             +V  +N +++SLCK  K DEAY+L  EM    +KP+  +Y+  +   C+ N+V++A+++
Sbjct: 308  PNVFTYNCIIKSLCKNNKIDEAYELLDEMLERGVKPDTWSYNTVLAFHCDHNEVNTALKL 367

Query: 878  LDRMRRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHC- 1054
            + RM +   E +  TYN +LK+L +  R +   +V   M ++G  P + +Y V+    C 
Sbjct: 368  ILRMDKDGCERDRHTYNMVLKMLIRIGRFDRMEKVWYSMEKKGFYPTVSTYAVMIHGLCK 427

Query: 1055 DHCEVNKALRMIRRMEKDGRMPDRHTYNMVLKMLI 1159
               ++ +A R    M  +G  P   T  ++   LI
Sbjct: 428  KRGKLEEASRYFEMMIDEGIPPYTETCEVLRNKLI 462


>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Glycine max]
          Length = 523

 Score =  476 bits (1226), Expect = e-132
 Identities = 221/378 (58%), Positives = 297/378 (78%)
 Frame = +2

Query: 32   FQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKR 211
            +   +S  +P ++   L D VNEI R+LSD R PHHDLE +L+ FS +IST+LV+QVLKR
Sbjct: 27   YHHFHSFPTPQVSGPLLPDLVNEISRLLSDHRYPHHDLELSLNPFSAQISTNLVDQVLKR 86

Query: 212  CKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEIS 391
            C NLG SAHRF+LWA  +PGF HS  + HILV+ILGS KQFA++WDF  +MR S + EI+
Sbjct: 87   CNNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEIN 146

Query: 392  PEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFE 571
             E+FW++FRAY +A+LP  AIR+F  M++FG+KP I+D D+LL++LCK K V+  Q+FF+
Sbjct: 147  SEIFWLIFRAYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFD 206

Query: 572  RVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGK 751
            + K  F  + KTYSIL+ GW ++GDS +A +LF  M ++GC +D++A+N LL++LCKGG 
Sbjct: 207  QAKNRFLLTAKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGC 266

Query: 752  ADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNC 931
             DEA  +F +M S  ++P+A TYSIFI + C+A+DV SA+RVLD+MRRYN+ PNVFTYNC
Sbjct: 267  VDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNC 326

Query: 932  ILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDG 1111
            I+K LCKN+ VE+AY +LDEM+ RGV PD WSYN IQA+HCDHCEVN+A+R++ RMEKD 
Sbjct: 327  IIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDN 386

Query: 1112 RMPDRHTYNMVLKMLIKV 1165
             +PDRHTYNMVLK+LI++
Sbjct: 387  CLPDRHTYNMVLKLLIRI 404


>ref|XP_007144700.1| hypothetical protein PHAVU_007G177800g [Phaseolus vulgaris]
            gi|561017890|gb|ESW16694.1| hypothetical protein
            PHAVU_007G177800g [Phaseolus vulgaris]
          Length = 524

 Score =  474 bits (1219), Expect = e-131
 Identities = 222/378 (58%), Positives = 292/378 (77%)
 Frame = +2

Query: 32   FQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQVLKR 211
            +  ++S  +P ++   L D VNEI R+LSD R PHHDLE +L  FSP+IST+LVEQVLKR
Sbjct: 27   YHHIHSFPNPQVSAPLLPDLVNEISRLLSDHRYPHHDLELSLKPFSPQISTNLVEQVLKR 86

Query: 212  CKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGNDEIS 391
            CKN+G SAHRF+LWA  +PGF HS  + HILV+ILGS +QFA++WDF  +MRDS +  I+
Sbjct: 87   CKNIGFSAHRFFLWARSIPGFQHSDLSFHILVEILGSCQQFAILWDFLIEMRDSRSYVIN 146

Query: 392  PEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQEFFE 571
             ++FW++F+AY RA+LP  AIR+F  M++FG+ P + DLD+LLY LCK+K ++  Q+FF+
Sbjct: 147  ADIFWLIFKAYSRANLPDGAIRSFNRMDEFGITPTVHDLDKLLYFLCKRKHLKQAQQFFD 206

Query: 572  RVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCKGGK 751
            + K  FS S KTYSIL+ GW  +GDS +  +LF+ M  +GC +D++A+N LL +LCK G 
Sbjct: 207  KAKNRFSLSAKTYSILISGWGEIGDSDKVHELFEAMLGQGCPLDLLAYNNLLGALCKSGC 266

Query: 752  ADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFTYNC 931
             DEA K F +M    ++P+A TYSIFI   C AN+V SA RVLD+M+RYNL PNVFTYNC
Sbjct: 267  VDEAKKFFHDMLLKGVEPDAFTYSIFIHFYCNANNVQSAFRVLDKMKRYNLLPNVFTYNC 326

Query: 932  ILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRMEKDG 1111
            I+K LCKN+ VE+AYQ+LDEM+  GV PDIWSYN IQA+HCDHCEVN+ALR++ RMEKD 
Sbjct: 327  IIKRLCKNELVEEAYQLLDEMISIGVKPDIWSYNAIQAYHCDHCEVNRALRLMFRMEKDN 386

Query: 1112 RMPDRHTYNMVLKMLIKV 1165
             +PDRHTYNMVLK+LI++
Sbjct: 387  CLPDRHTYNMVLKLLIRI 404



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 2/219 (0%)
 Frame = +2

Query: 509  DQLLYLLCKKKLVRYGQEFFERVKFE-FSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQ 685
            + LL  LCK   V   ++FF  +  +   P   TYSI +  +CN  +   A ++ D+M +
Sbjct: 255  NNLLGALCKSGCVDEAKKFFHDMLLKGVEPDAFTYSIFIHFYCNANNVQSAFRVLDKMKR 314

Query: 686  RGCSIDVIAHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHS 865
                 +V  +N +++ LCK    +EAY+L  EM S  +KP+  +Y+      C+  +V+ 
Sbjct: 315  YNLLPNVFTYNCIIKRLCKNELVEEAYQLLDEMISIGVKPDIWSYNAIQAYHCDHCEVNR 374

Query: 866  AMRVLDRMRRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNV-IQ 1042
            A+R++ RM + N  P+  TYN +LKLL +  R +   +V + MV +   P + +Y+V I 
Sbjct: 375  ALRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVNKSFFPSVSTYSVLIH 434

Query: 1043 AFHCDHCEVNKALRMIRRMEKDGRMPDRHTYNMVLKMLI 1159
             F     ++ +A +    M  +G  P   T  ++   L+
Sbjct: 435  GFCKKKGKLEEACKYFEMMIDEGIPPYVTTVELLRNRLL 473


>ref|XP_004503476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like isoform X1 [Cicer arietinum]
          Length = 524

 Score =  473 bits (1216), Expect = e-131
 Identities = 222/387 (57%), Positives = 298/387 (77%)
 Frame = +2

Query: 5    NFSPHLSFQFQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKIST 184
            NF+ H  F     +S  +P ++ S+L + VNEI RILSD R PHHDL+ +L  FS +IST
Sbjct: 24   NFNFHHRF-----HSLPTPQISASTLPELVNEISRILSDHRHPHHDLQLSLTPFSSQIST 78

Query: 185  HLVEQVLKRCKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQM 364
             LV+ VLKRC +L  SAHRF+LWA  +PGF H+ ++ HIL++ILGSSKQFA++WDF  ++
Sbjct: 79   DLVQHVLKRCNHLAFSAHRFFLWAKSIPGFQHNVDSFHILIEILGSSKQFAILWDFLVEI 138

Query: 365  RDSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKL 544
            RDS   EIS E+FW++F+AY RA LP  AIR+F  M++FG++P I+D D LLY+LCK+K 
Sbjct: 139  RDSNCCEISNEIFWLIFKAYSRADLPDGAIRSFMRMDEFGIEPCINDFDMLLYILCKRKH 198

Query: 545  VRYGQEFFERVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTL 724
            V+  Q+FF++ K  F  + KTYSIL+ GW  + DS +A ++F+EM ++GC +D++A+N L
Sbjct: 199  VKQAQQFFDQAKNRFLLTAKTYSILICGWGKIADSGKAREVFEEMVEQGCPVDLLAYNNL 258

Query: 725  LESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNL 904
            LESLCKGG  DEA  LF +M S  ++ +A TYSIFIR+ C AND+HSA RVLD+M+R NL
Sbjct: 259  LESLCKGGNVDEAMNLFHDMLSKRVEVDAFTYSIFIRSHCVANDMHSAFRVLDQMKRCNL 318

Query: 905  EPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALR 1084
             PNVFTYNCI+K LCKN+ VE+AY++LDEM+  G+ PD WSYN IQA+HCDHCEVN+ALR
Sbjct: 319  LPNVFTYNCIIKRLCKNKMVEEAYELLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALR 378

Query: 1085 MIRRMEKDGRMPDRHTYNMVLKMLIKV 1165
            ++ RMEKD  +PDRHTYN+VLK+LI++
Sbjct: 379  LMSRMEKDDCLPDRHTYNLVLKLLIRI 405



 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 2/289 (0%)
 Frame = +2

Query: 299  ILVDILGSSKQFALIWDFFSQMRDSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMED 478
            +L+ IL   K       FF Q ++     ++ + + I+   + + +    A   F+ M +
Sbjct: 188  MLLYILCKRKHVKQAQQFFDQAKN--RFLLTAKTYSILICGWGKIADSGKAREVFEEMVE 245

Query: 479  FGLKPGIDDLDQLLYLLCKKKLVRYGQEFF-ERVKFEFSPSPKTYSILMRGWCNVGDSVE 655
             G    +   + LL  LCK   V      F + +         TYSI +R  C   D   
Sbjct: 246  QGCPVDLLAYNNLLESLCKGGNVDEAMNLFHDMLSKRVEVDAFTYSIFIRSHCVANDMHS 305

Query: 656  AGKLFDEMTQRGCSIDVIAHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIR 835
            A ++ D+M +     +V  +N +++ LCK    +EAY+L  EM S  LKP+  +Y+    
Sbjct: 306  AFRVLDQMKRCNLLPNVFTYNCIIKRLCKNKMVEEAYELLDEMISSGLKPDTWSYNAIQA 365

Query: 836  ASCEANDVHSAMRVLDRMRRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSP 1015
              C+  +V+ A+R++ RM + +  P+  TYN +LKLL +  R +   +V + M ++   P
Sbjct: 366  YHCDHCEVNRALRLMSRMEKDDCLPDRHTYNLVLKLLIRIGRFDKVTEVWENMGDKKFYP 425

Query: 1016 DIWSYNV-IQAFHCDHCEVNKALRMIRRMEKDGRMPDRHTYNMVLKMLI 1159
             + +Y+V I  F     ++ +A R    M  +G  P   T  M+   L+
Sbjct: 426  SVSTYSVMIHGFCKKKGKLEEACRYFEIMVDEGIPPYVTTIEMLRNRLL 474


>ref|XP_006842064.1| hypothetical protein AMTR_s00078p00045650 [Amborella trichopoda]
            gi|548844113|gb|ERN03739.1| hypothetical protein
            AMTR_s00078p00045650 [Amborella trichopoda]
          Length = 595

 Score =  469 bits (1207), Expect = e-129
 Identities = 225/387 (58%), Positives = 302/387 (78%)
 Frame = +2

Query: 5    NFSPHLSFQFQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKIST 184
            NF    S  F +L  S+  +++ S L+D VNEICRILSD+RSP+HD+E +L+ F+ +++T
Sbjct: 73   NFHSSNSRPFSSLSDSEF-SVSSSQLSDNVNEICRILSDYRSPNHDMEPSLERFNGELTT 131

Query: 185  HLVEQVLKRCKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQM 364
             LVEQVLKRCK+LG S+HRF++WA K P F HS +++ ILVDILGS++ F +IWD    M
Sbjct: 132  DLVEQVLKRCKDLGNSSHRFFIWAYKRPDFKHSEQSYRILVDILGSNRHFPMIWDLVFGM 191

Query: 365  RDSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKL 544
            ++ G  EI  E+FW++FR+Y RA+LPTDAIRAF+ ME+FG+KP IDDLDQL+Y LCK +L
Sbjct: 192  KNDGF-EIKRELFWVMFRSYARANLPTDAIRAFRRMEEFGIKPSIDDLDQLIYTLCKHRL 250

Query: 545  VRYGQEFFERVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTL 724
            V Y  +FFE+ KFEF+ S K+YSIL+ GW  +G+ VEA  LF EM +    +D++A+NTL
Sbjct: 251  VDYAHKFFEKAKFEFAVSSKSYSILINGWGEIGNWVEAESLFHEMVKEKVPLDIVAYNTL 310

Query: 725  LESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNL 904
            L SLCK GK D A+KLF+EMGS+ L P+A +YS F+ A  EA+DV+SA+RV D MRR+NL
Sbjct: 311  LGSLCKSGKVDYAHKLFREMGSYGLVPDAFSYSTFVNAYSEADDVNSAIRVFDSMRRHNL 370

Query: 905  EPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALR 1084
             PNV+TYN ++K+LCKN+RV+DAY +LDEM+E+G+SPD+WSYN I A HC+  EVNKALR
Sbjct: 371  VPNVYTYNSLIKVLCKNERVDDAYGLLDEMIEKGLSPDLWSYNTILAIHCNVREVNKALR 430

Query: 1085 MIRRMEKDGRMPDRHTYNMVLKMLIKV 1165
            ++ RM++D   PD+HTYNM+LKMLI V
Sbjct: 431  LLNRMDRDLCKPDKHTYNMLLKMLILV 457



 Score =  102 bits (253), Expect = 4e-19
 Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
 Frame = +2

Query: 515  LLYLLCKKKLVRYGQEFFERV-KFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRG 691
            LL  LCK   V Y  + F  +  +   P   +YS  +  +    D   A ++FD M +  
Sbjct: 310  LLGSLCKSGKVDYAHKLFREMGSYGLVPDAFSYSTFVNAYSEADDVNSAIRVFDSMRRHN 369

Query: 692  CSIDVIAHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAM 871
               +V  +N+L++ LCK  + D+AY L  EM    L P+  +Y+  +   C   +V+ A+
Sbjct: 370  LVPNVYTYNSLIKVLCKNERVDDAYGLLDEMIEKGLSPDLWSYNTILAIHCNVREVNKAL 429

Query: 872  RVLDRMRRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFH 1051
            R+L+RM R   +P+  TYN +LK+L    R + A +V + M ERG  P + +Y V+    
Sbjct: 430  RLLNRMDRDLCKPDKHTYNMLLKMLILVGRFDRAVKVWNGMEERGFYPAVTTYAVMIHGL 489

Query: 1052 CDHCEVNKALRMIRRMEKDGRMPDRHTYNMVLKMLI 1159
            C    +  A      M  +G  P   T  ++   L+
Sbjct: 490  CKRGRIEDACSHFETMIDEGVPPYTSTCELIRNHLV 525


>ref|XP_006392896.1| hypothetical protein EUTSA_v10011389mg [Eutrema salsugineum]
            gi|557089474|gb|ESQ30182.1| hypothetical protein
            EUTSA_v10011389mg [Eutrema salsugineum]
          Length = 523

 Score =  464 bits (1195), Expect = e-128
 Identities = 218/381 (57%), Positives = 291/381 (76%)
 Frame = +2

Query: 23   SFQFQTLYSSQSPALNPSSLADEVNEICRILSDFRSPHHDLESALDCFSPKISTHLVEQV 202
            +F+F +  S   P+       D VNEI R+LSD R+P  DLE  L  +SP++S++LVEQV
Sbjct: 21   TFRFFSTLSHDPPS------PDLVNEISRVLSDHRNPKDDLEHTLGVYSPRVSSNLVEQV 74

Query: 203  LKRCKNLGVSAHRFYLWASKLPGFTHSRETHHILVDILGSSKQFALIWDFFSQMRDSGND 382
            LKRCKNLG  AHRF+LWA ++P F HS E++HILV+ILGSSKQFAL+WDF  + R+    
Sbjct: 75   LKRCKNLGFPAHRFFLWARRIPDFEHSLESYHILVEILGSSKQFALLWDFLIEAREYNYF 134

Query: 383  EISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYLLCKKKLVRYGQE 562
            EIS ++FWIVFRAY RA+LP +A RAF  M +FG+KP +DDLDQLL+ LC +K V + Q+
Sbjct: 135  EISSKVFWIVFRAYSRANLPGEASRAFNRMIEFGIKPCVDDLDQLLHSLCDRKHVNHAQD 194

Query: 563  FFERVKFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSIDVIAHNTLLESLCK 742
            FF+R K   +PS KTYSIL+RGW  + D+  A K+FDEM +  C +D++A+N  L++LCK
Sbjct: 195  FFDRAKAGIAPSAKTYSILVRGWARIRDASGARKVFDEMLETNCPVDLLAYNASLDALCK 254

Query: 743  GGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLDRMRRYNLEPNVFT 922
             G  D AYK+FQEMG+  L+P+A +Y+IFI A C+A+DVHSA +VLDRM+RY L PNV+T
Sbjct: 255  SGDVDGAYKMFQEMGNLGLEPDAYSYAIFIHAYCDADDVHSAYKVLDRMQRYELVPNVYT 314

Query: 923  YNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNVIQAFHCDHCEVNKALRMIRRME 1102
            YN I+K LCK +RV+DAY +LDEM++RG +PD W+YN I A+HCDHCEVN+A ++I RM+
Sbjct: 315  YNHIIKTLCKKERVDDAYLLLDEMIQRGANPDTWTYNSIMAYHCDHCEVNRATKLISRMD 374

Query: 1103 KDGRMPDRHTYNMVLKMLIKV 1165
            +   +PDRHTYNMVLK+LI++
Sbjct: 375  RTKCLPDRHTYNMVLKLLIRI 395



 Score = 94.7 bits (234), Expect = 7e-17
 Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 2/273 (0%)
 Frame = +2

Query: 347  DFFSQMRDSGNDEISPEMFWIVFRAYCRASLPTDAIRAFKNMEDFGLKPGIDDLDQLLYL 526
            DFF   R       S + + I+ R + R    + A + F  M +      +   +  L  
Sbjct: 194  DFFD--RAKAGIAPSAKTYSILVRGWARIRDASGARKVFDEMLETNCPVDLLAYNASLDA 251

Query: 527  LCKKKLVRYGQEFFERV-KFEFSPSPKTYSILMRGWCNVGDSVEAGKLFDEMTQRGCSID 703
            LCK   V    + F+ +      P   +Y+I +  +C+  D   A K+ D M +     +
Sbjct: 252  LCKSGDVDGAYKMFQEMGNLGLEPDAYSYAIFIHAYCDADDVHSAYKVLDRMQRYELVPN 311

Query: 704  VIAHNTLLESLCKGGKADEAYKLFQEMGSHDLKPNACTYSIFIRASCEANDVHSAMRVLD 883
            V  +N ++++LCK  + D+AY L  EM      P+  TY+  +   C+  +V+ A +++ 
Sbjct: 312  VYTYNHIIKTLCKKERVDDAYLLLDEMIQRGANPDTWTYNSIMAYHCDHCEVNRATKLIS 371

Query: 884  RMRRYNLEPNVFTYNCILKLLCKNQRVEDAYQVLDEMVERGVSPDIWSYNV-IQAFHCDH 1060
            RM R    P+  TYN +LKLL +  R +   ++ + M ER   P + +Y V I       
Sbjct: 372  RMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEMWEGMSEREFYPTVATYTVMIHGLVRKK 431

Query: 1061 CEVNKALRMIRRMEKDGRMPDRHTYNMVLKMLI 1159
             ++ +A R    M  DG  P   T  M+   L+
Sbjct: 432  GKIEEACRYFEMMIDDGIPPYSTTVEMLRNRLV 464