BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00036569
         (540 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007226246.1| hypothetical protein PRUPE_ppa017671mg [Prun...   280   2e-73
emb|CBI39303.3| unnamed protein product [Vitis vinifera]              275   4e-72
ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containi...   275   4e-72
ref|XP_004489557.1| PREDICTED: pentatricopeptide repeat-containi...   259   2e-67
ref|XP_002521822.1| pentatricopeptide repeat-containing protein,...   249   4e-64
ref|XP_004971330.1| PREDICTED: pentatricopeptide repeat-containi...   234   1e-59
ref|XP_006646705.1| PREDICTED: pentatricopeptide repeat-containi...   232   5e-59
dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica G...   231   6e-59
gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indi...   230   1e-58
ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   229   3e-58
ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containi...   229   3e-58
gb|EMT11927.1| hypothetical protein F775_17086 [Aegilops tauschii]    227   2e-57
dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]    226   3e-57
gb|EMT05859.1| Pentatricopeptide repeat-containing protein [Aegi...   225   6e-57
ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [S...   224   1e-56
ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containi...   223   2e-56
tpg|DAA55756.1| TPA: putative pentatricopeptide repeat family pr...   219   4e-55
ref|NP_001266463.1| Emp5 protein [Zea mays] gi|409032180|gb|AFV0...   219   4e-55
ref|XP_007020088.1| Pentatricopeptide repeat-containing protein,...   215   5e-54
ref|XP_006407155.1| hypothetical protein EUTSA_v10020137mg [Eutr...   208   6e-52

>ref|XP_007226246.1| hypothetical protein PRUPE_ppa017671mg [Prunus persica]
           gi|462423182|gb|EMJ27445.1| hypothetical protein
           PRUPE_ppa017671mg [Prunus persica]
          Length = 752

 Score =  280 bits (716), Expect = 2e-73
 Identities = 134/179 (74%), Positives = 152/179 (84%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           AA+RSGEQIQGYA+KAG+G  TIV NSQICMY KSGDID+ANLTF E E+ DVVSWS MI
Sbjct: 400 AAARSGEQIQGYAVKAGVGKFTIVQNSQICMYAKSGDIDSANLTFTETENPDVVSWSVMI 459

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
            S+AQHGCA EAL LFE+M   G APNH+TFLGVLTACSHGGLV+EGLRY+E MK D+G+
Sbjct: 460 CSKAQHGCAREALELFELMKNCGIAPNHITFLGVLTACSHGGLVEEGLRYFEIMKNDYGM 519

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
             NV+HCAC VDLL R+GRLVD+ENFI NSGFED+PVMWRALL ACR++ DT   KRVA
Sbjct: 520 TTNVQHCACAVDLLGRAGRLVDAENFIFNSGFEDNPVMWRALLSACRVYKDTVAAKRVA 578



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+ + G  + +G G+  ++ NS + MY K G +D A + FE  ++ D VSW+++I+S A+
Sbjct: 95  GKLVHGLIVLSGSGSDVVLTNSLMDMYSKCGWVDHAKILFENSDNLDDVSWNSLIASYAR 154

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTAC----SHGGLVKEGLRYYESMKRDHGLP 364
            G   E L     M + G + N  T    L AC     +  L  + L  Y       GL 
Sbjct: 155 IGANEETLRTLVKMHQCGFSLNTYTLGSALKACCKIFDNSELFGKLLHGYTVKL---GLD 211

Query: 365 PNVKHCACIVDLLARSGRLVDS 430
            +V     ++D+ A++G L D+
Sbjct: 212 LDVVVGTALLDMYAKTGDLGDA 233



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+ + GY +K GL    +VG + + MY K+GD+  A   F+ +  R+VV ++AMI+   Q
Sbjct: 198 GKLLHGYTVKLGLDLDVVVGTALLDMYAKTGDLGDAIQIFKVMPYRNVVMYNAMIAGFLQ 257

Query: 197 -----HGCATEALSLFEMMIRSGAAPNHVTFLGVLTAC 295
                +  A E  +L   M R G  P+  TF  +L AC
Sbjct: 258 IDTFSYEHANEVFNLLSQMQRLGVKPSTFTFSIILRAC 295


>emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  275 bits (704), Expect = 4e-72
 Identities = 128/179 (71%), Positives = 152/179 (84%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           AA +SGEQI  YA+K G+GN TI+ NSQICMY K GDID+AN+TF+E ++ D+VSWS MI
Sbjct: 365 AAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMI 424

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           SS AQHGCA EA+ LFE+M  SG APNH+TFLGVL ACSHGGLV+EGLRY+E MK+DHG+
Sbjct: 425 SSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGI 484

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            PNVKH ACIVDLL R+GRL ++E+FIM+SGFE DPVMWR+LL ACR+H  TDTGKRVA
Sbjct: 485 TPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVA 543



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
 Frame = +2

Query: 5   ASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMIS 184
           A   G+QI     K  L +   +GN+ + +Y  SG I+     F      DVVSW+++I 
Sbjct: 265 AFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIV 324

Query: 185 SRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYE-SMKRDHGL 361
              Q+G     L+LF  ++ SG  P+  T   +L+AC++   VK G + +  ++K   G 
Sbjct: 325 GHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGN 384

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
              +++    + + A+ G  +DS N         D V W  ++ +   HG
Sbjct: 385 FTIIQNSQ--ICMYAKCGD-IDSANMTFKETKNPDIVSWSVMISSNAQHG 431



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 41/118 (34%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           R G  I      +GLG   ++ NS I MY K G ID A L FE  ++ D VSW+++I+  
Sbjct: 58  RLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGY 117

Query: 191 AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACS-------------HGGLVKEGL 325
            + G   E L L   M+R G   N       L AC              HG  VK GL
Sbjct: 118 VRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGL 175



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+ + G A+K GL    +VG + +  Y K GD++ A   F+ + D +VV ++AMI+   Q
Sbjct: 163 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 222

Query: 197 -----HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
                   A EA+ LF  M   G  P+  TF  +L ACS     + G + +  + + + L
Sbjct: 223 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNL 281

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL 490
             +      +V+L + SG + D      +S  + D V W +L+
Sbjct: 282 QSDEFIGNALVELYSLSGSIEDGLK-CFHSTPKLDVVSWTSLI 323


>ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  275 bits (704), Expect = 4e-72
 Identities = 128/179 (71%), Positives = 152/179 (84%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           AA +SGEQI  YA+K G+GN TI+ NSQICMY K GDID+AN+TF+E ++ D+VSWS MI
Sbjct: 444 AAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMI 503

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           SS AQHGCA EA+ LFE+M  SG APNH+TFLGVL ACSHGGLV+EGLRY+E MK+DHG+
Sbjct: 504 SSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGI 563

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            PNVKH ACIVDLL R+GRL ++E+FIM+SGFE DPVMWR+LL ACR+H  TDTGKRVA
Sbjct: 564 TPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVA 622



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
 Frame = +2

Query: 5   ASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMIS 184
           A   G+QI     K  L +   +GN+ + +Y  SG I+     F      DVVSW+++I 
Sbjct: 344 AFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIV 403

Query: 185 SRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYE-SMKRDHGL 361
              Q+G     L+LF  ++ SG  P+  T   +L+AC++   VK G + +  ++K   G 
Sbjct: 404 GHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGN 463

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
              +++    + + A+ G  +DS N         D V W  ++ +   HG
Sbjct: 464 FTIIQNSQ--ICMYAKCGD-IDSANMTFKETKNPDIVSWSVMISSNAQHG 510



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 42/148 (28%), Positives = 68/148 (45%)
 Frame = +2

Query: 77  NSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQHGCATEALSLFEMMIRSGAA 256
           N+ + MY K G+ D A   F+ +  R+VVSW+++IS   Q G   E ++LF+    S   
Sbjct: 58  NNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLR 117

Query: 257 PNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVKHCACIVDLLARSGRLVDSEN 436
            +  TF   L+ C     ++ G R   ++    GL   V     ++D+  + GR +D   
Sbjct: 118 LDKFTFSNALSVCGRTLDLRLG-RLIHALITVSGLGGPVLLTNSLIDMYCKCGR-IDWAR 175

Query: 437 FIMNSGFEDDPVMWRALLGACRIHGDTD 520
            +  S  E D V W +L+      G  D
Sbjct: 176 LVFESADELDSVSWNSLIAGYVRIGSND 203



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 41/118 (34%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           R G  I      +GLG   ++ NS I MY K G ID A L FE  ++ D VSW+++I+  
Sbjct: 137 RLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGY 196

Query: 191 AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACS-------------HGGLVKEGL 325
            + G   E L L   M+R G   N       L AC              HG  VK GL
Sbjct: 197 VRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGL 254



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+ + G A+K GL    +VG + +  Y K GD++ A   F+ + D +VV ++AMI+   Q
Sbjct: 242 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 301

Query: 197 -----HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
                   A EA+ LF  M   G  P+  TF  +L ACS     + G + +  + + + L
Sbjct: 302 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNL 360

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL 490
             +      +V+L + SG + D      +S  + D V W +L+
Sbjct: 361 QSDEFIGNALVELYSLSGSIEDGLK-CFHSTPKLDVVSWTSLI 402


>ref|XP_004489557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like isoform X1 [Cicer arietinum]
           gi|502091468|ref|XP_004489558.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g13880-like isoform X2 [Cicer arietinum]
           gi|502091472|ref|XP_004489559.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g13880-like isoform X3 [Cicer arietinum]
          Length = 742

 Score =  259 bits (663), Expect = 2e-67
 Identities = 126/179 (70%), Positives = 145/179 (81%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           AA R+GE IQGYA+K G+ N TIV NSQICMY KSGDID+A  TF+E E+ DVVSWS MI
Sbjct: 384 AAKRTGELIQGYALKFGVANFTIVKNSQICMYAKSGDIDSAWTTFQETENPDVVSWSVMI 443

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
            S AQHG A EAL LFE+M  SG  PN VT LGVLTACSHGGLV EGLRYYE+MK+D+G+
Sbjct: 444 GSYAQHGFAKEALRLFELMTISGVKPNQVTLLGVLTACSHGGLVDEGLRYYETMKKDYGI 503

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
             NVKH ACIVDLL R+GRL ++  FI++SGFEDDPVMWRALL AC++H DTD GKR+A
Sbjct: 504 EANVKHSACIVDLLGRAGRLEEARRFILDSGFEDDPVMWRALLAACKVHKDTDMGKRIA 562



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 4/169 (2%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G QI     K+GL     VG+S + +Y   G I+     FE     DVVSW++ I+   +
Sbjct: 288 GRQIHAQIFKSGLEGDEFVGSSLVDLYSFFGSIEDGLRCFEMTPKLDVVSWTSAIAGCVR 347

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +G    ALSLF+  + +G   +      V+ AC+     + G      + + + L   V 
Sbjct: 348 NGQFENALSLFDQFLANGRKLDEFIVSSVMGACADMAAKRTG-----ELIQGYALKFGVA 402

Query: 377 HCACI----VDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
           +   +    + + A+SG  +DS           D V W  ++G+   HG
Sbjct: 403 NFTIVKNSQICMYAKSGD-IDSAWTTFQETENPDVVSWSVMIGSYAQHG 450


>ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539035|gb|EEF40632.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 793

 Score =  249 bits (635), Expect = 4e-64
 Identities = 119/179 (66%), Positives = 144/179 (80%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           AA RSGEQ+ GYA+K G+G   IV NSQI MY KSG++D+A +TFEEI++ DVVSWS MI
Sbjct: 434 AAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMI 493

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
            S AQHG A +A++LFE+M   G  PN +TFLGVLTACSHGGLV+EGLRYYESMK+D+ +
Sbjct: 494 CSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDM 553

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
             NVKHC CIVDLL+R+GRL+D++NFI+NSGF D PVMWR LL  CRI+ D  TGK VA
Sbjct: 554 KINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVA 612



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+ + GY +K GL    +VG + + MY K+G +  A   F    +++VV ++AMI+   Q
Sbjct: 232 GKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQ 291

Query: 197 -----HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
                  CA EAL LF  M R G  P+  TF  ++  C+H    + G + +  + + H +
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICK-HNI 350

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDT 523
             +    + +++L +  G   D      NS  + D V W  ++     +G  ++
Sbjct: 351 QSDEFIGSTLIELYSLLGSTEDQLK-CFNSTPKLDIVSWTTMIAGYAQNGQFES 403



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 2/160 (1%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+ I G A+  GLG    + N  I MY K   ID A L FE  ++ D VSW+++I+  A+
Sbjct: 129 GKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYAR 188

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTAC--SHGGLVKEGLRYYESMKRDHGLPPN 370
            G   E L L   M  +G   N  T    L +C  +   +V  G +         GL  +
Sbjct: 189 VGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYG-KTLHGYTVKQGLDLD 247

Query: 371 VKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL 490
           +     ++D+ A++G L D+      S    + VM+ A++
Sbjct: 248 IVVGTALLDMYAKTGYLGDAIQLFRTSP-NQNVVMYNAMI 286



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI  +  K  + +   +G++ I +Y   G  +     F      D+VSW+ MI+  AQ
Sbjct: 338 GKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQ 397

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYY-ESMKRDHGLPPNV 373
           +G    AL+LF  ++ SG  P+      +L+AC+     + G + +  ++K   G    V
Sbjct: 398 NGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIV 457

Query: 374 KHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
           ++    + + A+SG L DS           D V W  ++ +   HG
Sbjct: 458 QNSQ--ISMYAKSGNL-DSAKITFEEIKNPDVVSWSVMICSNAQHG 500


>ref|XP_004971330.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Setaria italica]
          Length = 791

 Score =  234 bits (597), Expect = 1e-59
 Identities = 110/179 (61%), Positives = 138/179 (77%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +R+GEQIQ  A K+G    T++GNS I MY +SGD+DAA L F+E+E RDVVSWSA+I
Sbjct: 434 AVARTGEQIQCLATKSGFNRFTVMGNSCIHMYARSGDVDAATLRFKEMESRDVVSWSAVI 493

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           SS AQHGCA +AL +F  M+ +   PN +TFLGVLTACSHGGLV EGLRYYE M +++GL
Sbjct: 494 SSHAQHGCAKDALCIFNEMMDAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMNKEYGL 553

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            P +KHC C+VDLL R+GRL D+E FI +S F DDPV+WR+LL +CRIHGD + G+  A
Sbjct: 554 APTIKHCTCVVDLLGRAGRLGDAEAFIRDSVFLDDPVIWRSLLASCRIHGDMERGQLAA 612



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           R+G+ +   A+  GL    +V NS I MY +  ++D A   F+  ++ D VSW++++S  
Sbjct: 126 RTGKAVHALAVLDGLAKGMLVSNSLISMYARCCEMDEARRVFDAADEHDDVSWNSLLSGY 185

Query: 191 AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHG----GLVKEGLRYYESMKRDHG 358
            + G   E L +F +M R G   N      ++  C  G    G + E +          G
Sbjct: 186 VRAGAHQEMLKVFTLMCRCGMGWNSFALGSIIKCCPSGVDIAGHIAEAV---HGCVVKTG 242

Query: 359 LPPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL-GACRIHGDTDTGKRV 535
           L  +V   + ++D+ A+ G L ++   +  S  + + +++ A++ G CR   +   GK V
Sbjct: 243 LATDVFLASALIDMYAKKGALSNAV-ALFKSVQDPNVIVFNAMIAGFCR--DEAAVGKEV 299



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
 Frame = +2

Query: 5   ASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMIS 184
           A    E + G  +K GL     + ++ I MY K G +  A   F+ ++D +V+ ++AMI+
Sbjct: 227 AGHIAEAVHGCVVKTGLATDVFLASALIDMYAKKGALSNAVALFKSVQDPNVIVFNAMIA 286

Query: 185 SRAQHGCAT------EALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMK 346
              +   A       EAL+L+  ++  G  P   TF  V+ AC+  G  + G + +  + 
Sbjct: 287 GFCRDEAAVGKEVTREALNLYSELLSRGMEPTEFTFSSVVRACNLAGEFEFGKQLHGQVL 346

Query: 347 RDHGLPPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL 490
           + H L  +    + ++DL + SG   D       S ++ D V W +++
Sbjct: 347 K-HSLQGDDYIGSALIDLYSNSGCTEDGYR-CFRSLYKQDIVTWTSMI 392



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 42/165 (25%), Positives = 74/165 (44%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+Q+ G  +K  L     +G++ I +Y  SG  +     F  +  +D+V+W++MIS   Q
Sbjct: 338 GKQLHGQVLKHSLQGDDYIGSALIDLYSNSGCTEDGYRCFRSLYKQDIVTWTSMISGFVQ 397

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +    +AL LF+ ++  G  P+  T   V+ AC+   + + G    + +    G      
Sbjct: 398 NELFEKALRLFQELLCYGLKPDLFTISSVMNACASLAVARTG-EQIQCLATKSGFNRFTV 456

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
                + + ARSG  VD+           D V W A++ +   HG
Sbjct: 457 MGNSCIHMYARSGD-VDAATLRFKEMESRDVVSWSAVISSHAQHG 500


>ref|XP_006646705.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Oryza brachyantha]
          Length = 787

 Score =  232 bits (591), Expect = 5e-59
 Identities = 107/179 (59%), Positives = 136/179 (75%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +R+GEQIQ +A K+G    T++GNS + MY +SGD+DAA   F+E+E  DVVSWSA+I
Sbjct: 436 AVARAGEQIQCFATKSGFDRFTVMGNSCMHMYARSGDVDAATRRFQEMESHDVVSWSALI 495

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           SS AQHGCA +AL  F  M+ +   PN +TFLGVLTACSHGGLV EGLRYYE M +++GL
Sbjct: 496 SSHAQHGCARDALHFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMNKEYGL 555

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            P ++HC C+VDLL R+GRL D+E FI NS F  DPV+WR+LL +CRIHGD + G+ VA
Sbjct: 556 TPTIRHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHGDLERGQLVA 614



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 2/178 (1%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           RSG+ +   A+  GL     V NS I MY + GD+  A   F+  E+RD VSW++++S  
Sbjct: 128 RSGKAVHALAVLDGLSCGVFVSNSLISMYARCGDMAEARRVFDIAEERDDVSWNSLVSGY 187

Query: 191 AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACS-HGGLVKEGLRYYESMKRDHGLPP 367
            + G   E +S+F MM R G   N      V+  CS HG    +            GL  
Sbjct: 188 VRAGARDEMVSVFAMMRRCGMGLNSFALGSVIKCCSGHGDGAMDVAEAVHGCVVKSGLDS 247

Query: 368 NVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL-GACRIHGDTDTGKRVA 538
            +   + ++D+ A+ G L+++   +  S  E + V++ A++ G CR   +T  GK VA
Sbjct: 248 ELFLVSAMIDMYAKKGALMEAV-ALFRSVQESNVVVFNAMIAGFCRT--ETVIGKEVA 302



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 45/165 (27%), Positives = 71/165 (43%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI G  +K        +G++ I +Y   G I+     F  I + D+V+W+ MIS   Q
Sbjct: 340 GKQIHGQVLKHCFQGDDFIGSALIDLYFNFGCIEDGFRCFRSIPEHDIVTWTTMISGCVQ 399

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +    EAL+LF   + +G  P+  T   V+ AC+   + + G    +      G      
Sbjct: 400 NELFEEALNLFHESLGAGLKPDLFTISSVMNACASLAVARAG-EQIQCFATKSGFDRFTV 458

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
                + + ARSG  VD+           D V W AL+ +   HG
Sbjct: 459 MGNSCMHMYARSGD-VDAATRRFQEMESHDVVSWSALISSHAQHG 502



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 14/174 (8%)
 Frame = +2

Query: 20  EQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ- 196
           E + G  +K+GL +   + ++ I MY K G +  A   F  +++ +VV ++AMI+   + 
Sbjct: 234 EAVHGCVVKSGLDSELFLVSAMIDMYAKKGALMEAVALFRSVQESNVVVFNAMIAGFCRT 293

Query: 197 -----HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
                   A+EAL+L+  +   G  P   TF  VL AC+  G       Y E  K+ HG 
Sbjct: 294 ETVIGKEVASEALTLYSEVQSCGMQPTEFTFSSVLRACNLAG-------YLEFGKQIHG- 345

Query: 362 PPNVKHC--------ACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGAC 499
              +KHC        + ++DL    G + D       S  E D V W  ++  C
Sbjct: 346 -QVLKHCFQGDDFIGSALIDLYFNFGCIEDGFR-CFRSIPEHDIVTWTTMISGC 397


>dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
           gi|125573391|gb|EAZ14906.1| hypothetical protein
           OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  231 bits (590), Expect = 6e-59
 Identities = 107/179 (59%), Positives = 136/179 (75%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +R+GEQIQ +A K+G    T++GNS + MY +SGD+DAA   F+E+E  DVVSWSA+I
Sbjct: 434 AVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVI 493

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           S  AQHGCA +AL  F+ M+ +   PN +TFLGVLTACSHGGLV EGLRYYE+M +D+GL
Sbjct: 494 SCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGL 553

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            P +KHC C+VDLL R+GRL D+E FI NS F  DPV+WR+LL +CRIH D + G+ VA
Sbjct: 554 SPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVA 612



 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           R+G  +   A+  GL +   V NS + MY K G++  A   F+  E+RD VSW++++S  
Sbjct: 126 RAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGY 185

Query: 191 AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACS-HGGLVKEGLRYYESMKRDHGLPP 367
            + G   E + +F MM R G   N      V+  CS  G    +            GL  
Sbjct: 186 VRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDS 245

Query: 368 NVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL-GACRIHGDTDTGKRVA 538
           +V   + ++D+ A+ G LV++   +  S  E + VM+  ++ G CR   +T  GK VA
Sbjct: 246 DVFLVSAMIDMYAKKGALVEAA-ALFRSVQEPNVVMFNTMIAGFCRT--ETVIGKEVA 300



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
 Frame = +2

Query: 20  EQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ- 196
           E + G  +KAGL +   + ++ I MY K G +  A   F  +++ +VV ++ MI+   + 
Sbjct: 232 EAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRT 291

Query: 197 -----HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
                   A+EAL+L+  +   G  P   TF  VL AC+  G       Y E  K+ HG 
Sbjct: 292 ETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAG-------YLEFGKQIHG- 343

Query: 362 PPNVKHC--------ACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGAC 499
              +K+         + ++DL   SG + D      +S  + D V W A++  C
Sbjct: 344 -QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGC 395



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 44/165 (26%), Positives = 70/165 (42%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI G  +K        +G++ I +Y  SG ++     F      D+V+W+AM+S   Q
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ 397

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +    +ALSLF   + +G  P+  T   V+ AC+   + + G    +      G      
Sbjct: 398 NELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAG-EQIQCFATKSGFDRFTV 456

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
                V + ARSG  VD+           D V W A++     HG
Sbjct: 457 MGNSCVHMYARSGD-VDAATRRFQEMESHDVVSWSAVISCHAQHG 500


>gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  230 bits (587), Expect = 1e-58
 Identities = 106/179 (59%), Positives = 135/179 (75%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +R+GEQIQ +A K+G    T++GNS + MY +SGD+DAA   F+E+E  DVVSWSA+I
Sbjct: 434 AVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVI 493

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           S  AQHGCA +AL  F+ M+ +   PN +TFLGVLTACSHGGLV EGLRYYE+M +D+GL
Sbjct: 494 SCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGL 553

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            P +KHC C+VDLL R+GRL D+E FI N  F  DPV+WR+LL +CRIH D + G+ VA
Sbjct: 554 SPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVA 612



 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           R+G  +   A+  GL +   V NS + MY K G++  A   F+  E+RD VSW++++S  
Sbjct: 126 RAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGY 185

Query: 191 AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACS-HGGLVKEGLRYYESMKRDHGLPP 367
            + G   E + +F MM R G   N      V+  CS  G    +            GL  
Sbjct: 186 VRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDS 245

Query: 368 NVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL-GACRIHGDTDTGKRVA 538
           +V   + ++D+ A+ G LV++   +  S  E + VM+  ++ G CR   +T  GK VA
Sbjct: 246 DVFLVSAMIDMYAKKGALVEAA-ALFRSVQEPNVVMFNTMIAGFCRT--ETVIGKEVA 300



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
 Frame = +2

Query: 20  EQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ- 196
           E + G  +KAGL +   + ++ I MY K G +  A   F  +++ +VV ++ MI+   + 
Sbjct: 232 EAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRT 291

Query: 197 -----HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
                   A+EAL+L+  +   G  P   TF  VL AC+  G       Y E  K+ HG 
Sbjct: 292 ETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAG-------YLEFGKQIHG- 343

Query: 362 PPNVKHC--------ACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGAC 499
              +K+         + ++DL   SG + D      +S  + D V W A++  C
Sbjct: 344 -QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGC 395



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 44/165 (26%), Positives = 70/165 (42%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI G  +K        +G++ I +Y  SG ++     F      D+V+W+AM+S   Q
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ 397

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +    +ALSLF   + +G  P+  T   V+ AC+   + + G    +      G      
Sbjct: 398 NELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAG-EQIQCFATKSGFDRFTV 456

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
                V + ARSG  VD+           D V W A++     HG
Sbjct: 457 MGNSCVHMYARSGD-VDAATRRFQEMESHDVVSWSAVISCHAQHG 500


>ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  229 bits (584), Expect = 3e-58
 Identities = 110/176 (62%), Positives = 135/176 (76%)
 Frame = +2

Query: 11   RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
            RSGEQIQG+A K G+   TI  NSQI MY KSGD+ AANLTF+++E+ D+VSWS MI S 
Sbjct: 487  RSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSN 546

Query: 191  AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPN 370
            AQHG A EAL  FE+M   G  PNH  FLGVL ACSH GLV+EGLRY+++M++D+ +  +
Sbjct: 547  AQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLH 606

Query: 371  VKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            VKHC C+VDLL R+GRL D+E+ I+  GFE +PVMWRALL ACRIH DT T +RVA
Sbjct: 607  VKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVA 662



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
 Frame = +2

Query: 14  SGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRA 193
           +G+ I G  +  GLG+  ++ NS I MY K G +D A + F+  +  D VSW+++I+   
Sbjct: 178 AGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYV 237

Query: 194 QHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDH----GL 361
           Q+G   E L++ + M ++G A N  T    L ACS       G + + +M  DH    GL
Sbjct: 238 QNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSN---FNGCKMFGTMLHDHAIKLGL 294

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL 490
             +V     ++D+ A++G L D+   I +   + + VM+ A++
Sbjct: 295 HLDVVVGTALLDMYAKTGSLDDAIQ-IFDQMVDKNVVMYNAMM 336



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G  +  +A+K GL    +VG + + MY K+G +D A   F+++ D++VV ++AM++   Q
Sbjct: 282 GTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQ 341

Query: 197 H-----GCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRY---YESMKRD 352
                  CA +AL+LF  M   G  P+  T+  +L AC    ++ E  ++     ++   
Sbjct: 342 QETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKAC----IIVEDFKFAKQVHALMCK 397

Query: 353 HGLPPNVKHCACIVDLLARSGRLVDS 430
           +GL  +    + ++DL +  G ++D+
Sbjct: 398 NGLLSDEYIGSILIDLYSVLGSMMDA 423



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/158 (24%), Positives = 76/158 (48%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+ +  + +K        + N+ + MY K GD  +A+  F+++   ++V+++++IS   Q
Sbjct: 78  GKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQ 137

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
                + + LF+   R G   +  T  G LTACS  G +  G +    +   +GL   V 
Sbjct: 138 MSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAG-KMIHGLILVYGLGSQVV 196

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL 490
               ++D+ ++ G+ VD    + +   + D V W +L+
Sbjct: 197 LTNSLIDMYSKCGQ-VDYARILFDHSDKLDGVSWNSLI 233


>ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  229 bits (584), Expect = 3e-58
 Identities = 110/176 (62%), Positives = 135/176 (76%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           RSGEQIQG+A K G+   TI  NSQI MY KSGD+ AANLTF+++E+ D+VSWS MI S 
Sbjct: 394 RSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSN 453

Query: 191 AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPN 370
           AQHG A EAL  FE+M   G  PNH  FLGVL ACSH GLV+EGLRY+++M++D+ +  +
Sbjct: 454 AQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLH 513

Query: 371 VKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
           VKHC C+VDLL R+GRL D+E+ I+  GFE +PVMWRALL ACRIH DT T +RVA
Sbjct: 514 VKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVA 569



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
 Frame = +2

Query: 14  SGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRA 193
           +G+ I G  +  GLG+  ++ NS I MY K G +D A + F+  +  D VSW+++I+   
Sbjct: 85  AGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYV 144

Query: 194 QHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDH----GL 361
           Q+G   E L++ + M ++G A N  T    L ACS       G + + +M  DH    GL
Sbjct: 145 QNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSN---FNGCKMFGTMLHDHAIKLGL 201

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL 490
             +V     ++D+ A++G L D+   I +   + + VM+ A++
Sbjct: 202 HLDVVVGTALLDMYAKTGSLDDAIQ-IFDQMVDKNVVMYNAMM 243



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G  +  +A+K GL    +VG + + MY K+G +D A   F+++ D++VV ++AM++   Q
Sbjct: 189 GTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQ 248

Query: 197 H-----GCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRY---YESMKRD 352
                  CA +AL+LF  M   G  P+  T+  +L AC    ++ E  ++     ++   
Sbjct: 249 QETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKAC----IIVEDFKFAKQVHALMCK 304

Query: 353 HGLPPNVKHCACIVDLLARSGRLVDS 430
           +GL  +    + ++DL +  G ++D+
Sbjct: 305 NGLLSDEYIGSILIDLYSVLGSMMDA 330


>gb|EMT11927.1| hypothetical protein F775_17086 [Aegilops tauschii]
          Length = 676

 Score =  227 bits (578), Expect = 2e-57
 Identities = 108/179 (60%), Positives = 135/179 (75%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +R+GEQIQ +A K+G G  T +GNS I MY +SGD+DAA   F+E+E  DVVSWSA+I
Sbjct: 275 AVARTGEQIQCFATKSGFGRFTAIGNSCIHMYARSGDVDAAVRRFQEMELHDVVSWSAII 334

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           SS AQHGCA EAL  F  M+ +   PN +TFLGVLTACSHGGLV EGLRYYE M+ ++ L
Sbjct: 335 SSHAQHGCAREALRFFSEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMQEEYAL 394

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            P +KHC C+VDLL R+GRL D+E FI +S F D+PV+WR+LL +CRIH D + G+ VA
Sbjct: 395 SPTIKHCTCVVDLLGRAGRLGDAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVA 453



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
 Frame = +2

Query: 26  IQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQHGC 205
           + G  +KAGL +   + ++ + MY K G +  A   F+ + D +VV ++AMI+   + G 
Sbjct: 75  VHGCVVKAGLDSDVFLASAMVDMYAKKGALSEAVALFKSVHDPNVVVFNAMIAGLCRDGA 134

Query: 206 AT------EALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPP 367
           A       EAL L+  +   G  P   TF  V+ AC+  G ++ G       K+ HG   
Sbjct: 135 AVGMDVLREALCLYSEVQSQGMEPTEFTFSSVIRACNLAGDLEFG-------KQIHG--Q 185

Query: 368 NVKHC--------ACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGAC 499
            +K+C        + ++DL   SG + D       S  + D V W A++  C
Sbjct: 186 VIKYCFQGDDFIGSPLIDLYFNSGCMEDGFR-CFRSLPKQDVVTWTAMISGC 236



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 44/165 (26%), Positives = 72/165 (43%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI G  +K        +G+  I +Y  SG ++     F  +  +DVV+W+AMIS   Q
Sbjct: 179 GKQIHGQVIKYCFQGDDFIGSPLIDLYFNSGCMEDGFRCFRSLPKQDVVTWTAMISGCVQ 238

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +     AL+LF  ++ +G  P+  T   V+ AC+   + + G    +      G      
Sbjct: 239 NELFERALTLFHELLAAGLKPDPFTISTVMNACASLAVARTG-EQIQCFATKSGFGRFTA 297

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
                + + ARSG  VD+           D V W A++ +   HG
Sbjct: 298 IGNSCIHMYARSGD-VDAAVRRFQEMELHDVVSWSAIISSHAQHG 341


>dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  226 bits (576), Expect = 3e-57
 Identities = 105/179 (58%), Positives = 135/179 (75%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +R+GEQIQ +A K+G G  T +GNS I MY +SGD+ AA   F+E+E  D+VSWSA+I
Sbjct: 439 AVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVI 498

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           SS AQHGCA +AL  F  M+ +   PN +TFLGVLTACSHGGLV EGL+YYE+MK ++ L
Sbjct: 499 SSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYAL 558

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            P +KHC C+VDLL R+GRL D+E FI +S F D+PV+WR+LL +CRIH D + G+ VA
Sbjct: 559 SPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVA 617



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 57/224 (25%), Positives = 91/224 (40%), Gaps = 46/224 (20%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKA-----GLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVS 166
           A SR+G   +G A+ A     G+     V NS + MY + GD+  A   F+  ++RD VS
Sbjct: 123 ACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVS 182

Query: 167 WSAMISSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACS-------------HGG 307
           W+A++S   + G   + L +F MM RSG   N      V+  C+             HG 
Sbjct: 183 WNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGC 242

Query: 308 LVKEGL-------RYYESMKRDHG------------LPPNVKHCACIVDLLARSGRLVDS 430
           +VK G             M    G            L PNV     ++  L R    V +
Sbjct: 243 VVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGT 302

Query: 431 E---------NFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRV 535
           +         + + + G E     + +++ AC + GD + GK++
Sbjct: 303 DVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQI 346



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
 Frame = +2

Query: 26  IQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQHGC 205
           + G  +KAG  +   + ++ + MY K G +  A   F+ + D +VV ++AMI+   +   
Sbjct: 239 VHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEA 298

Query: 206 AT------EALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPP 367
           A       EALSL+  +   G  P   TF  V+ AC+  G ++ G       K+ HG   
Sbjct: 299 AVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFG-------KQIHG--Q 349

Query: 368 NVKHC--------ACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGAC 499
            +KHC        + ++DL   SG + D       S  + D V W A++  C
Sbjct: 350 VLKHCFQGDDFIGSALIDLYLNSGCMEDGFR-CFTSVPKQDVVTWTAMISGC 400



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/102 (30%), Positives = 53/102 (51%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI G  +K        +G++ I +Y  SG ++     F  +  +DVV+W+AMIS   Q
Sbjct: 343 GKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQ 402

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEG 322
           +     AL+LF  ++ +G  P+  T   V+ AC+   + + G
Sbjct: 403 NELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTG 444


>gb|EMT05859.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 701

 Score =  225 bits (573), Expect = 6e-57
 Identities = 108/179 (60%), Positives = 134/179 (74%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +R+GEQIQ +A K+G G  T +GNS I MY +SGD+DAA   F+E+E  DVVSWSA+I
Sbjct: 275 AVARTGEQIQCFATKSGFGRFTAIGNSCIHMYARSGDVDAAVRRFQEMELHDVVSWSAII 334

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           SS AQHGCA EAL  F  M+ +   PN +TFLGVLTACSHGGLV EGLRYYE MK ++ L
Sbjct: 335 SSHAQHGCAREALRFFSEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKNEYAL 394

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            P +KH  C+VDLL R+GRL D+E FI +S F D+PV+WR+LL +CRIH D + G+ VA
Sbjct: 395 SPTIKHRTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVA 453



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
 Frame = +2

Query: 26  IQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQHGC 205
           + G  +KAGL +   + ++ + MY K G +  A   F+ + D +VV ++AMI+   +   
Sbjct: 75  VHGCVVKAGLDSDVFLASAMVDMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEA 134

Query: 206 AT------EALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPP 367
           A       EALSL+  +   G  P   TF  ++ AC+  G ++ G       K+ HG   
Sbjct: 135 AVGMDVLREALSLYSEVQSRGMEPTEFTFSSIIRACNLAGDIEFG-------KQIHG--Q 185

Query: 368 NVKHC--------ACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGAC 499
            +KHC        + ++DL   SG + D  +    S  + D VMW A++  C
Sbjct: 186 VLKHCFQGNDFIGSALIDLYFNSGYMEDGFS-CFRSVPKQDVVMWAAMISGC 236



 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 44/165 (26%), Positives = 73/165 (44%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI G  +K     +  +G++ I +Y  SG ++     F  +  +DVV W+AMIS   Q
Sbjct: 179 GKQIHGQVLKHCFQGNDFIGSALIDLYFNSGYMEDGFSCFRSVPKQDVVMWAAMISGCVQ 238

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +     AL+LF  ++ +G  P+  T   V+ AC+   + + G    +      G      
Sbjct: 239 NELFERALTLFHELLAAGLKPDPFTISIVMNACASLAVARTG-EQIQCFATKSGFGRFTA 297

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
                + + ARSG  VD+           D V W A++ +   HG
Sbjct: 298 IGNSCIHMYARSGD-VDAAVRRFQEMELHDVVSWSAIISSHAQHG 341


>ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
           gi|241928942|gb|EES02087.1| hypothetical protein
           SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  224 bits (570), Expect = 1e-56
 Identities = 107/179 (59%), Positives = 133/179 (74%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +R+GEQIQ  A+K G    T +GNS I M  +SGD+DA    F+E+E RDVVSWSA+I
Sbjct: 428 AVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVI 487

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           SS AQHGCA +AL +F  M+ +  APN VTFL VLTACSHGGLV +GLRYYE MK ++GL
Sbjct: 488 SSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGL 547

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            P +KH  C+VDLL R+GRL D+E FI +S F DD V+WR+LL +CRIHGD + G+ VA
Sbjct: 548 SPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVA 606



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           R+G+ +    +  GLGN   + NS   MY   G++  A   F+  E+ D VSW++++S  
Sbjct: 120 RTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGY 179

Query: 191 AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKR---DHGL 361
            + G   E L +F +M   G   N      ++  C+ G  V  G    E++       GL
Sbjct: 180 VRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDV--GRHIAEAVHGCVVKAGL 237

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL-GACRIHGDTDTGKRVA 538
             ++   + ++D+ A+ G L ++   +  S  + + +++ A++ G CR   +   GK V+
Sbjct: 238 DADLFLASAMIDMYAKRGALTNAV-ALFKSVPDPNVIVFNAMIAGFCR--DEAAVGKEVS 294



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
 Frame = +2

Query: 20  EQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQH 199
           E + G  +KAGL     + ++ I MY K G +  A   F+ + D +V+ ++AMI+   + 
Sbjct: 226 EAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRD 285

Query: 200 GCAT------EALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
             A       EALSL+  M   G  P+  TF  +L AC+  G    G + +  + + H  
Sbjct: 286 EAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLK-HSF 344

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGAC 499
             +    + ++DL + SG + D       S  + D V W +++  C
Sbjct: 345 HDDDYIGSALIDLYSDSGCMEDGYR-CFRSLPKQDIVTWTSMISGC 389



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 43/165 (26%), Positives = 75/165 (45%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI G  +K    +   +G++ I +Y  SG ++     F  +  +D+V+W++MIS   Q
Sbjct: 332 GKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQ 391

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +    +AL LF+  I  G  P+  T   V+ AC+   + + G    + +   +G      
Sbjct: 392 NELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTG-EQIQCLAIKYGFNRFTA 450

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
                + + ARSG  VD+           D V W A++ +   HG
Sbjct: 451 MGNSFIHMCARSGD-VDAVTRRFQEMESRDVVSWSAVISSHAQHG 494


>ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  223 bits (569), Expect = 2e-56
 Identities = 106/179 (59%), Positives = 135/179 (75%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A  R+GEQ+Q +A K+G    T +GNS I MY +SG+++AA   F+E+E  DVVSWSA+I
Sbjct: 439 AVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAII 498

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
           SS AQHGCA +AL  F  M+ +   PN +TFLGVLTACSHGGLV EGLRYYE MK ++GL
Sbjct: 499 SSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGL 558

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
            P VKHC C+VDLL R+GRL D+E FI +S F D+PV+W++LLG+CRIH D + G+ VA
Sbjct: 559 CPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVA 617



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           + G+ +   A+  GL     V NS + MY + GD+  A   F+  E+RD VSW++++S  
Sbjct: 131 KEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGY 190

Query: 191 AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHG-GLVKEGLRYYESMKRDHGLPP 367
            + G   E L +F +M R     N      V+  CS G G V+             GL  
Sbjct: 191 LRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDT 250

Query: 368 NVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALL-GACR 502
           ++   + +VD+ A+ G L ++   +  S  + + V++ A++ G CR
Sbjct: 251 DLFLASAMVDMYAKRGALSEAV-ALFKSVLDPNVVVFNAMIAGLCR 295



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 14/174 (8%)
 Frame = +2

Query: 20  EQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQH 199
           E + G  +KAGL     + ++ + MY K G +  A   F+ + D +VV ++AMI+   + 
Sbjct: 237 EAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRD 296

Query: 200 GCAT------EALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
             A       EALSL+  +   G  P   TF  V+ AC+  G ++ G       K+ HG 
Sbjct: 297 EAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFG-------KQIHG- 348

Query: 362 PPNVKHC--------ACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGAC 499
              +KHC        + ++DL   S  + D       S  + D V W A++  C
Sbjct: 349 -QVLKHCFQGDDFIGSALIDLYFNSACMEDGFR-CFRSVPKQDVVTWTAMISGC 400



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 43/165 (26%), Positives = 72/165 (43%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI G  +K        +G++ I +Y  S  ++     F  +  +DVV+W+AMIS   Q
Sbjct: 343 GKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQ 402

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +     AL+LF  ++  G  P+  T   V+ AC+   +V+ G    +      G      
Sbjct: 403 NELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTG-EQMQCFATKSGFDRFTA 461

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
                + + ARSG  V++           D V W A++ +   HG
Sbjct: 462 MGNSCIHMYARSGN-VEAAIQRFQEMESHDVVSWSAIISSHAQHG 505


>tpg|DAA55756.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 465

 Score =  219 bits (557), Expect = 4e-55
 Identities = 106/180 (58%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +R+GEQIQ  A+K+G    T +GNS I M  +SGD+DAA   F+E+E RDVVSWSA+I
Sbjct: 120 AVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVI 179

Query: 182 SSRAQHGCATEALSLF-EMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHG 358
           SS A HGCA +AL +F EM+    A PN +TFL +LTACSHGGLV EGLRYY  M  ++G
Sbjct: 180 SSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYG 239

Query: 359 LPPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
           L P +KHC C+VDLL R+GRL D+E FI +S F DD V+WR+LL +CRIHGD + G+ VA
Sbjct: 240 LSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVA 299



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/165 (26%), Positives = 72/165 (43%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI G  +K        +G++ I +Y  SG ++     F  +  +DVV W+++IS   Q
Sbjct: 24  GKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQ 83

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +    EAL LF+  +R G  P+      V+ AC+   + + G    + +    G      
Sbjct: 84  NELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTG-EQIQCLAVKSGFNRFTA 142

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
                + + ARSG  VD+           D V W A++ +   HG
Sbjct: 143 MGNSFIHMCARSGD-VDAATRRFQEMESRDVVSWSAVISSHAHHG 186


>ref|NP_001266463.1| Emp5 protein [Zea mays] gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
           gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
           gi|414878626|tpg|DAA55757.1| TPA: putative
           pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  219 bits (557), Expect = 4e-55
 Identities = 106/180 (58%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +R+GEQIQ  A+K+G    T +GNS I M  +SGD+DAA   F+E+E RDVVSWSA+I
Sbjct: 431 AVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVI 490

Query: 182 SSRAQHGCATEALSLF-EMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHG 358
           SS A HGCA +AL +F EM+    A PN +TFL +LTACSHGGLV EGLRYY  M  ++G
Sbjct: 491 SSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYG 550

Query: 359 LPPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
           L P +KHC C+VDLL R+GRL D+E FI +S F DD V+WR+LL +CRIHGD + G+ VA
Sbjct: 551 LSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVA 610



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 11/175 (6%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           R+G+ +    +  GLGN   + NS   MY + G++  A   F+  E+RD VSW+A++S  
Sbjct: 119 RTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGY 178

Query: 191 AQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSH-----------GGLVKEGLRYYE 337
            + G   E L +F +M R G   N      ++  C+            GG + E +    
Sbjct: 179 VRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAV---H 235

Query: 338 SMKRDHGLPPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACR 502
                 GL  ++   + ++D+ A+ G L ++     +    +  V+   + G CR
Sbjct: 236 GCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCR 290



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
 Frame = +2

Query: 11  RSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSR 190
           R  E + G  +KAGL     + ++ I MY K G +  A   F+ + D +V+  +AMI+  
Sbjct: 229 RIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGF 288

Query: 191 AQH---GCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
            +      A EAL L+  +   G  P+  +F  +L AC+  G    G + +  + + H  
Sbjct: 289 CREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLK-HSF 347

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGAC 499
             +V   + ++DL + SG + D       S  + D V+W +++  C
Sbjct: 348 QGDVYIGSALIDLYSGSGCMEDGYR-CFRSLPKQDVVIWTSVISGC 392



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/165 (26%), Positives = 72/165 (43%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMISSRAQ 196
           G+QI G  +K        +G++ I +Y  SG ++     F  +  +DVV W+++IS   Q
Sbjct: 335 GKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQ 394

Query: 197 HGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGLPPNVK 376
           +    EAL LF+  +R G  P+      V+ AC+   + + G    + +    G      
Sbjct: 395 NELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTG-EQIQCLAVKSGFNRFTA 453

Query: 377 HCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHG 511
                + + ARSG  VD+           D V W A++ +   HG
Sbjct: 454 MGNSFIHMCARSGD-VDAATRRFQEMESRDVVSWSAVISSHAHHG 497


>ref|XP_007020088.1| Pentatricopeptide repeat-containing protein, putative isoform 1
           [Theobroma cacao] gi|590603767|ref|XP_007020089.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 1 [Theobroma cacao] gi|508725416|gb|EOY17313.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 1 [Theobroma cacao] gi|508725417|gb|EOY17314.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 1 [Theobroma cacao]
          Length = 669

 Score =  215 bits (548), Expect = 5e-54
 Identities = 101/179 (56%), Positives = 137/179 (76%)
 Frame = +2

Query: 2   AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
           A +  GEQ+ G+A+++ LGN  IV NSQ+CMY K GDI +A+LTF E+++ DVVSWS MI
Sbjct: 441 ATASLGEQVHGHAIRSSLGNFRIVQNSQLCMYAKCGDIGSADLTFREMQNPDVVSWSVMI 500

Query: 182 SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
            S AQHGCA +AL+LFE+M   G APNH+TF+GVL ACS+GGLV+EGL+++ESMK  + +
Sbjct: 501 CSYAQHGCARDALNLFELMKEHGIAPNHITFIGVLCACSYGGLVEEGLQFFESMKH-YDV 559

Query: 362 PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
             + +H  C+VDL  R+GRL ++ENFI+ S F+D+ V+WRALL ACR++ DT T K  A
Sbjct: 560 ETSAEHYCCVVDLFGRAGRLAEAENFILTSCFKDNAVIWRALLSACRVYKDTVTAKHAA 618



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
 Frame = +2

Query: 17  GEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMIS---- 184
           GE + G  +K GL    +VG + + MY K G++++A   FE + DR++V ++AMIS    
Sbjct: 239 GEMLHGCIIKLGLDVDIVVGTALLDMYAKKGEVNSAVKIFETMPDRNIVMYNAMISGFIE 298

Query: 185 -SRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTAC 295
                  CA EA SLF  + R G  P+  TF  +L AC
Sbjct: 299 AESISKECANEAFSLFSELKRQGLKPSKFTFSSMLKAC 336


>ref|XP_006407155.1| hypothetical protein EUTSA_v10020137mg [Eutrema salsugineum]
            gi|557108301|gb|ESQ48608.1| hypothetical protein
            EUTSA_v10020137mg [Eutrema salsugineum]
          Length = 751

 Score =  208 bits (530), Expect = 6e-52
 Identities = 101/179 (56%), Positives = 132/179 (73%)
 Frame = +2

Query: 2    AASRSGEQIQGYAMKAGLGNHTIVGNSQICMYGKSGDIDAANLTFEEIEDRDVVSWSAMI 181
            AAS SGEQIQGYA+K+G+   T V  S I MY KSG++  A+  F E+E+ D+ ++SAMI
Sbjct: 472  AASSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMALASKIFTEVENPDIATYSAMI 531

Query: 182  SSRAQHGCATEALSLFEMMIRSGAAPNHVTFLGVLTACSHGGLVKEGLRYYESMKRDHGL 361
            SS AQHG A++AL++FE M   G  PN  TFL +L AC HGGLV +GL Y++SMK D+G+
Sbjct: 532  SSLAQHGFASDALNIFESMKTHGFKPNQQTFLSILIACCHGGLVTQGLTYFQSMKNDYGI 591

Query: 362  PPNVKHCACIVDLLARSGRLVDSENFIMNSGFEDDPVMWRALLGACRIHGDTDTGKRVA 538
             PN KH  C+VDLL R+GRL D+E  I++SGF+D PVMWRALL +CR++ D   G+RVA
Sbjct: 592  HPNEKHITCLVDLLGRTGRLSDAEELILSSGFQDHPVMWRALLSSCRVYKDGVIGRRVA 650