BLASTX nr result
ID: Cocculus23_contig00036467
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00036467
(574 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 prote... 79 8e-13
ref|XP_006439063.1| hypothetical protein CICLE_v100309242mg, par... 79 8e-13
ref|XP_007052591.1| Cohesin subunit rad21, putative isoform 1 [T... 78 2e-12
ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote... 77 2e-12
emb|CBI24843.3| unnamed protein product [Vitis vinifera] 77 2e-12
ref|XP_004308212.1| PREDICTED: sister chromatid cohesion 1 prote... 74 2e-11
ref|NP_001061406.1| Os08g0266700 [Oryza sativa Japonica Group] g... 73 5e-11
ref|XP_006659986.1| PREDICTED: sister chromatid cohesion 1 prote... 72 1e-10
ref|NP_001159213.1| hypothetical protein [Zea mays] gi|223942693... 72 1e-10
gb|AAG53668.1| RIX4 [Oryza sativa] 72 1e-10
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote... 71 2e-10
ref|XP_004973133.1| PREDICTED: sister chromatid cohesion 1 prote... 70 3e-10
ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicag... 70 3e-10
gb|EMT29103.1| Sister chromatid cohesion 1 protein 3 [Aegilops t... 70 5e-10
gb|EMS60008.1| Double-strand-break repair protein rad21-like pro... 68 2e-09
gb|EXB59938.1| Sister chromatid cohesion 1 protein 3 [Morus nota... 67 4e-09
gb|EMT03612.1| Sister chromatid cohesion 1 protein 3 [Aegilops t... 66 6e-09
ref|XP_003571593.1| PREDICTED: sister chromatid cohesion 1 prote... 66 6e-09
ref|XP_002444148.1| hypothetical protein SORBIDRAFT_07g009570 [S... 65 1e-08
gb|EYU31343.1| hypothetical protein MIMGU_mgv1a005279mg [Mimulus... 64 3e-08
>ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Citrus
sinensis]
Length = 735
Score = 79.0 bits (193), Expect = 8e-13
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP 435
LNKIL+GKTRK CA+MFFETLVLKSY L+DVEQE YGDITL LTP
Sbjct: 683 LNKILQGKTRKLCARMFFETLVLKSYGLLDVEQEQPYGDITLKLTP 728
>ref|XP_006439063.1| hypothetical protein CICLE_v100309242mg, partial [Citrus
clementina] gi|557541259|gb|ESR52303.1| hypothetical
protein CICLE_v100309242mg, partial [Citrus clementina]
Length = 123
Score = 79.0 bits (193), Expect = 8e-13
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP 435
LNKIL+GKTRK CA+MFFETLVLKSY L+DVEQE YGDITL LTP
Sbjct: 71 LNKILQGKTRKLCARMFFETLVLKSYGLLDVEQEQPYGDITLKLTP 116
>ref|XP_007052591.1| Cohesin subunit rad21, putative isoform 1 [Theobroma cacao]
gi|508704852|gb|EOX96748.1| Cohesin subunit rad21,
putative isoform 1 [Theobroma cacao]
Length = 677
Score = 77.8 bits (190), Expect = 2e-12
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP 435
LNKILEGKTRK CA+MFFETLVLKSY L+DV Q+DA GDITL LTP
Sbjct: 625 LNKILEGKTRKICARMFFETLVLKSYGLVDVRQDDANGDITLKLTP 670
>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
vinifera]
Length = 761
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/53 (73%), Positives = 46/53 (86%), Gaps = 1/53 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAKF 417
LNKILEGKTRK A+MFFETLVLK+Y L+DV+QE+ YGDITL +TP LS A+F
Sbjct: 709 LNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSKARF 761
>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/53 (73%), Positives = 46/53 (86%), Gaps = 1/53 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAKF 417
LNKILEGKTRK A+MFFETLVLK+Y L+DV+QE+ YGDITL +TP LS A+F
Sbjct: 657 LNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSKARF 709
>ref|XP_004308212.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Fragaria
vesca subsp. vesca]
Length = 736
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLT 438
LNKILEGK RK CA+MFFETLVLKSYDLIDV+QE YGDI+L LT
Sbjct: 686 LNKILEGKRRKLCARMFFETLVLKSYDLIDVKQEVPYGDISLKLT 730
>ref|NP_001061406.1| Os08g0266700 [Oryza sativa Japonica Group]
gi|37806398|dbj|BAC99936.1| unknown protein [Oryza
sativa Japonica Group] gi|113623375|dbj|BAF23320.1|
Os08g0266700 [Oryza sativa Japonica Group]
gi|133925837|gb|ABO43671.1| RIX4-4 [Oryza sativa
Japonica Group] gi|215715232|dbj|BAG94983.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222640231|gb|EEE68363.1| hypothetical protein
OsJ_26669 [Oryza sativa Japonica Group]
Length = 728
Score = 73.2 bits (178), Expect = 5e-11
Identities = 38/53 (71%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAKF 417
LN+ILEG+ RK+ A+MFFETLVLKSYD IDVEQE AYGDI + + P LS AKF
Sbjct: 676 LNRILEGRHRKQAARMFFETLVLKSYDYIDVEQEAAYGDIAVSVKPSLSGAKF 728
>ref|XP_006659986.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Oryza
brachyantha]
Length = 733
Score = 72.0 bits (175), Expect = 1e-10
Identities = 36/52 (69%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAK 420
LNKILEG+ RK+ A+MFFETLVLKSYD IDV+Q++AYGDI + + P LS AK
Sbjct: 681 LNKILEGRARKQAARMFFETLVLKSYDYIDVQQDEAYGDIAVSVKPSLSGAK 732
>ref|NP_001159213.1| hypothetical protein [Zea mays] gi|223942693|gb|ACN25430.1| unknown
[Zea mays] gi|413916835|gb|AFW56767.1| hypothetical
protein ZEAMMB73_164241 [Zea mays]
Length = 627
Score = 72.0 bits (175), Expect = 1e-10
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTPLSNA 423
LNKILEGKTRK+ A+MFFET VLKSY+ IDV+QED YG I +L+ PL +A
Sbjct: 574 LNKILEGKTRKQAARMFFETTVLKSYNYIDVQQEDPYGAIEILVKPLLSA 623
>gb|AAG53668.1| RIX4 [Oryza sativa]
Length = 528
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAKF 417
LN+ILEG+ RK+ A+MFFETLVLKSYD IDVEQE AYGDI + + P LS A+F
Sbjct: 452 LNRILEGRHRKQAARMFFETLVLKSYDYIDVEQEAAYGDIAVSVKPSLSGAQF 504
>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
sativus]
Length = 908
Score = 71.2 bits (173), Expect = 2e-10
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP 435
LN ILEGK RK CA+MF+ETLVLKSY LIDV+Q+ YGDITL LTP
Sbjct: 856 LNGILEGKRRKLCARMFYETLVLKSYGLIDVQQDVPYGDITLKLTP 901
>ref|XP_004973133.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Setaria
italica]
Length = 686
Score = 70.5 bits (171), Expect = 3e-10
Identities = 36/52 (69%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAK 420
LNKILEGK RK+ A+MFFET VLKSYD IDV+QE+ YGDI + + P LS AK
Sbjct: 634 LNKILEGKARKQAARMFFETTVLKSYDYIDVQQEEPYGDIEISVKPSLSTAK 685
>ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicago truncatula]
gi|355487106|gb|AES68309.1| Sister chromatid cohesion 1
protein [Medicago truncatula]
Length = 737
Score = 70.5 bits (171), Expect = 3e-10
Identities = 36/52 (69%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAK 420
LNKIL+GKTRK A+MFFE LVLK++DLIDV+QE+ YGDI+ LTP L AK
Sbjct: 685 LNKILDGKTRKIAARMFFEVLVLKTHDLIDVQQEEPYGDISFKLTPALDKAK 736
>gb|EMT29103.1| Sister chromatid cohesion 1 protein 3 [Aegilops tauschii]
Length = 626
Score = 69.7 bits (169), Expect = 5e-10
Identities = 34/52 (65%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAK 420
LN+IL+G+T+K+ A MFFETL LKSYD IDV QE+AYGDI++ + P LS+AK
Sbjct: 574 LNRILDGRTKKQAASMFFETLALKSYDYIDVHQEEAYGDISVSVRPSLSSAK 625
>gb|EMS60008.1| Double-strand-break repair protein rad21-like protein [Triticum
urartu]
Length = 719
Score = 67.8 bits (164), Expect = 2e-09
Identities = 30/44 (68%), Positives = 39/44 (88%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLL 441
LN+IL+G+T+K+ A MFFETL LKSYD IDV QE+AYGDI++L+
Sbjct: 543 LNRILDGRTKKQAASMFFETLALKSYDYIDVHQEEAYGDISVLI 586
>gb|EXB59938.1| Sister chromatid cohesion 1 protein 3 [Morus notabilis]
Length = 712
Score = 66.6 bits (161), Expect = 4e-09
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP 435
LNK+L+GKTR CA+MFF TLVLKS L+DV +E+ YGDITL LTP
Sbjct: 660 LNKLLKGKTRTLCARMFFGTLVLKSNGLVDVVEEEPYGDITLKLTP 705
>gb|EMT03612.1| Sister chromatid cohesion 1 protein 3 [Aegilops tauschii]
Length = 651
Score = 66.2 bits (160), Expect = 6e-09
Identities = 34/52 (65%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAK 420
L+ IL+G+TRK+ A MFFETL LKSYD IDV QE+AYGDI++ + P LS+AK
Sbjct: 599 LSIILDGRTRKQAASMFFETLALKSYDYIDVYQEEAYGDISVSVRPSLSSAK 650
>ref|XP_003571593.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Brachypodium
distachyon]
Length = 677
Score = 66.2 bits (160), Expect = 6e-09
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAK 420
LN ILEG+ RK+ A+MFFETL LKSYD IDV+QE+AY DI + + P LS AK
Sbjct: 625 LNSILEGRRRKQAARMFFETLALKSYDYIDVQQEEAYSDIKISVRPSLSAAK 676
>ref|XP_002444148.1| hypothetical protein SORBIDRAFT_07g009570 [Sorghum bicolor]
gi|241940498|gb|EES13643.1| hypothetical protein
SORBIDRAFT_07g009570 [Sorghum bicolor]
Length = 687
Score = 65.5 bits (158), Expect = 1e-08
Identities = 36/53 (67%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQ-EDAYGDITLLLTP-LSNAK 420
LNKILEGKTRK+ A+MFFET VLKSYD IDV+Q E+ +GDI + + P LS AK
Sbjct: 634 LNKILEGKTRKQAARMFFETTVLKSYDYIDVQQAEEPFGDIEISVKPSLSAAK 686
>gb|EYU31343.1| hypothetical protein MIMGU_mgv1a005279mg [Mimulus guttatus]
Length = 490
Score = 63.9 bits (154), Expect = 3e-08
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 572 LNKILEGKTRKRCAQMFFETLVLKSYDLIDVEQEDAYGDITLLLTP-LSNAKF 417
L KILEGK +K CA+MF+ETLVLK+Y LID QE Y DI L +TP LS +F
Sbjct: 436 LKKILEGKPKKICARMFYETLVLKNYGLIDTNQEKPYDDIILRITPKLSKGQF 488