BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00036183
         (809 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007017910.1| Pentatricopeptide repeat (PPR) superfamily p...   323   6e-86
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   312   1e-82
gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]     311   1e-82
ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi...   309   9e-82
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]   309   9e-82
ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containi...   305   1e-80
ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containi...   304   3e-80
ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citr...   304   3e-80
ref|XP_007136124.1| hypothetical protein PHAVU_009G019800g [Phas...   302   1e-79
ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containi...   301   2e-79
ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containi...   295   1e-77
ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Popu...   293   4e-77
ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutr...   281   3e-73
ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Caps...   279   1e-72
ref|XP_002890377.1| pentatricopeptide repeat-containing protein ...   278   2e-72
ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containi...   277   3e-72
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,...   277   3e-72
ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containi...   277   4e-72
ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containi...   276   6e-72
ref|NP_564110.1| pentatricopeptide repeat-containing protein [Ar...   269   8e-70

>ref|XP_007017910.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508723238|gb|EOY15135.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 532

 Score =  323 bits (827), Expect = 6e-86
 Identities = 158/245 (64%), Positives = 188/245 (76%), Gaps = 5/245 (2%)
 Frame = +3

Query: 90  KAKLRFPLSLSQLR---FKPYCXXXXXXXXXDVQEHEIETNNNSLTMSPTETLVADKLHA 260
           K+KLRFP S+S L    FK Y          + +E  +        +SP E  VA+K H+
Sbjct: 5   KSKLRFPSSISPLSQRFFKLYSSTPTSLRGDESEETNMSEKPKIAALSPEEAEVAEKFHS 64

Query: 261 LIKDHHRKNPNPSLQS--PSPDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVRHGI 434
           LIKDHHRKNPNP L S  P+PD TIP+LS+DFS++S + SISPS+VR VI+KCG VRHGI
Sbjct: 65  LIKDHHRKNPNPDLNSAPPTPDFTIPSLSLDFSKISAVHSISPSLVRHVIDKCGGVRHGI 124

Query: 435 PFTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEIPIETF 614
           PF Q+L+FFNW T  P F  SP+PYNEMIDLAGK+RHF++AWHLIDLMK +NV++ IETF
Sbjct: 125 PFLQTLSFFNWATTRPDFASSPDPYNEMIDLAGKLRHFDLAWHLIDLMKAKNVDVSIETF 184

Query: 615 SILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFFDSLKH 794
           SIL+RRYVRAGLAAEAVHAFNRME+YGC PD++AFS+VIS LCKKRRA EAQ FFD LK 
Sbjct: 185 SILIRRYVRAGLAAEAVHAFNRMEDYGCVPDKIAFSIVISSLCKKRRAEEAQTFFDKLKD 244

Query: 795 RFEPD 809
            FEPD
Sbjct: 245 NFEPD 249


>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492879|gb|AES74082.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  312 bits (799), Expect = 1e-82
 Identities = 153/244 (62%), Positives = 185/244 (75%), Gaps = 3/244 (1%)
 Frame = +3

Query: 87  IKAKLRFPLSLSQLRFKPYCXXXXXXXXXDVQEHEIETNNNS---LTMSPTETLVADKLH 257
           IK+++ F L  S   F P+           V EH+   NN +     +SP +T + DK H
Sbjct: 4   IKSRVNFHLHHSLSPFLPHTFRLCSSSPL-VSEHDTNDNNTTPQNTNLSPEDTHIVDKFH 62

Query: 258 ALIKDHHRKNPNPSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVRHGIP 437
            +IKDH+RKNPNP+  SPS +L+IP LSI+FS++S + S+SPS+ RR IEKC  VRHGIP
Sbjct: 63  TIIKDHYRKNPNPNAVSPSLNLSIPDLSIEFSKISTVYSVSPSITRRAIEKCSGVRHGIP 122

Query: 438 FTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEIPIETFS 617
           F QSLAFFNW T    F  SPEPYNEMIDLAGK+RHF++AWHLIDLMK+R V I + TFS
Sbjct: 123 FLQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFS 182

Query: 618 ILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFFDSLKHR 797
           +LVRRYVRAGLAAEAVHAFNRME+YGCKPD+V+FS+VIS LCKKRRA EA+ FFDSLKH+
Sbjct: 183 VLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK 242

Query: 798 FEPD 809
           FEPD
Sbjct: 243 FEPD 246


>gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]
          Length = 535

 Score =  311 bits (798), Expect = 1e-82
 Identities = 157/249 (63%), Positives = 189/249 (75%), Gaps = 8/249 (3%)
 Frame = +3

Query: 87  IKAKLRFPLSLSQLRFKPYCXXXXXXXXXDVQEHEIETNNN------SLTMSPTETLVAD 248
           IK+KLRFP   S                 +    E +TN+N      S ++SP ETL+AD
Sbjct: 4   IKSKLRFPNLFSSPFKLQLGLYAFFSSSSEAHLSEEDTNDNPQTGPTSSSLSPEETLIAD 63

Query: 249 KLHALIKDHHRKNPNPSLQS--PSPDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSV 422
           KLH+LIK HHRKNP+P      P+P+ TIP+LS+DFSQ+S + S+SP +VRRVIEKCG V
Sbjct: 64  KLHSLIKGHHRKNPSPDSNPSPPNPNFTIPSLSLDFSQISAVHSLSPGIVRRVIEKCGGV 123

Query: 423 RHGIPFTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEIP 602
           RHGIP  Q+LAFFNW T   +  +SPEPYNE++DLAGKVR F++AWH++DLMKTRNVEI 
Sbjct: 124 RHGIPVLQALAFFNWATAQDRLGQSPEPYNELVDLAGKVRQFDLAWHVLDLMKTRNVEIT 183

Query: 603 IETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFFD 782
           IETFSILVRRYVRAG AAEAVHAFNRM++YGCKPD++AFSVVIS LCKKRRA EAQ+FFD
Sbjct: 184 IETFSILVRRYVRAGFAAEAVHAFNRMDDYGCKPDKIAFSVVISNLCKKRRATEAQSFFD 243

Query: 783 SLKHRFEPD 809
            LK +FEPD
Sbjct: 244 GLKDKFEPD 252


>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Vitis vinifera]
          Length = 531

 Score =  309 bits (791), Expect = 9e-82
 Identities = 158/241 (65%), Positives = 187/241 (77%), Gaps = 4/241 (1%)
 Frame = +3

Query: 99  LRFPLS-LSQLRFKPYCXXXXXXXXXDVQEHEIETNNNS---LTMSPTETLVADKLHALI 266
           LR+ LS +SQ  F+ Y            +E E++ + NS   + +S  ETLV +K H+LI
Sbjct: 13  LRYSLSPVSQHSFRLYSSSSEASE----EEDEVKESGNSAVNIVLSSEETLVVEKFHSLI 68

Query: 267 KDHHRKNPNPSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVRHGIPFTQ 446
           K H RKN NP   SP+P  TI +LS DFSQ+S  DS+S ++VRRVIEKCG VRHGIPF Q
Sbjct: 69  KSHQRKNTNPDPISPNPHYTIASLSFDFSQISSADSVSSAIVRRVIEKCGGVRHGIPFPQ 128

Query: 447 SLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEIPIETFSILV 626
           +LAFFNW TN  +F  SPEPY EMIDLAGKVR F++AW LIDLMKTRNVEIP+ETF+ILV
Sbjct: 129 TLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILV 188

Query: 627 RRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFFDSLKHRFEP 806
           RRYV+AGLAAEAVHAFNRME+YGCKPD++AFSVVIS L KKRRA+EAQ+FFDSLK RFEP
Sbjct: 189 RRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEP 248

Query: 807 D 809
           D
Sbjct: 249 D 249


>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score =  309 bits (791), Expect = 9e-82
 Identities = 158/241 (65%), Positives = 187/241 (77%), Gaps = 4/241 (1%)
 Frame = +3

Query: 99   LRFPLS-LSQLRFKPYCXXXXXXXXXDVQEHEIETNNNS---LTMSPTETLVADKLHALI 266
            LR+ LS +SQ  F+ Y            +E E++ + NS   + +S  ETLV +K H+LI
Sbjct: 1045 LRYSLSPVSQHSFRLYSSSSEASE----EEDEVKESGNSAVNIVLSSEETLVVEKFHSLI 1100

Query: 267  KDHHRKNPNPSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVRHGIPFTQ 446
            K H RKN NP   SP+P  TI +LS DFSQ+S  DS+S ++VRRVIEKCG VRHGIPF Q
Sbjct: 1101 KSHQRKNTNPDPISPNPHYTIASLSFDFSQISSADSVSSAIVRRVIEKCGGVRHGIPFPQ 1160

Query: 447  SLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEIPIETFSILV 626
            +LAFFNW TN  +F  SPEPY EMIDLAGKVR F++AW LIDLMKTRNVEIP+ETF+ILV
Sbjct: 1161 TLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILV 1220

Query: 627  RRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFFDSLKHRFEP 806
            RRYV+AGLAAEAVHAFNRME+YGCKPD++AFSVVIS L KKRRA+EAQ+FFDSLK RFEP
Sbjct: 1221 RRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEP 1280

Query: 807  D 809
            D
Sbjct: 1281 D 1281


>ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 529

 Score =  305 bits (782), Expect = 1e-80
 Identities = 149/212 (70%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
 Frame = +3

Query: 180 QEHEIETNNNSLTMSPTETLVADKLHALIKDHHRKNPNPSLQS--PSPDLTIPTLSIDFS 353
           + H  + N+ S T    ETL+AD  H+LIKDHHR NPNP+     P+P  TIP+LS DFS
Sbjct: 33  EPHLQDENDTSQTAPTEETLIADTFHSLIKDHHRNNPNPNPNPAPPNPTYTIPSLSSDFS 92

Query: 354 QLSPIDSISPSVVRRVIEKCGSVRHGIPFTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAG 533
           QLS   S+SP+VVRRV+EKCG+VRHGIP  Q++AFFNW T+   F+ +PEPYNEM+DLAG
Sbjct: 93  QLSAAGSVSPAVVRRVLEKCGAVRHGIPVLQAVAFFNWATSREGFEHNPEPYNEMVDLAG 152

Query: 534 KVRHFNVAWHLIDLMKTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRV 713
           KVR F++AWH+IDLMK RNVEI +ETFSILVRRYVRAGLAAEAVHAFNRMEEYG  PDR+
Sbjct: 153 KVRQFDLAWHVIDLMKARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEEYGVSPDRI 212

Query: 714 AFSVVISILCKKRRAVEAQAFFDSLKHRFEPD 809
           AFSVVI ILCKKRRA EAQAFFDSLKH+FE D
Sbjct: 213 AFSVVIGILCKKRRASEAQAFFDSLKHKFEAD 244


>ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Citrus sinensis]
          Length = 538

 Score =  304 bits (778), Expect = 3e-80
 Identities = 159/248 (64%), Positives = 187/248 (75%), Gaps = 7/248 (2%)
 Frame = +3

Query: 87  IKAKLRFPLSLSQLRFKPYCXXXXXXXXXDVQEHEIETNNNSLT----MSPTETLVADKL 254
           IK+  R P SLSQ   K Y          +  + +  TN NS      +SP ETL+++K 
Sbjct: 8   IKSNHRLPFSLSQQIPKAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPFLSPEETLISEKF 67

Query: 255 HALIKDHHRKNPNPSLQS-PS--PDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVR 425
           H+LIKDHHRKNPNPS  S PS  PD TIP+LS+ FSQ+S   SISPS VR VIEK   VR
Sbjct: 68  HSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVR 127

Query: 426 HGIPFTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEIPI 605
           HGIP  Q L+FFNWVT  P+F  SP+ Y+EMI+LAGKVR F++AWH IDLMK+RNVEI +
Sbjct: 128 HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV 187

Query: 606 ETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFFDS 785
           +TFSILVRRYVRAGLAAEAVHAFNRMEEYGC PD++AFS+VISILC+KRRA EAQ+FFDS
Sbjct: 188 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 247

Query: 786 LKHRFEPD 809
           LK +FEPD
Sbjct: 248 LKDKFEPD 255


>ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citrus clementina]
           gi|557537379|gb|ESR48497.1| hypothetical protein
           CICLE_v10000789mg [Citrus clementina]
          Length = 541

 Score =  304 bits (778), Expect = 3e-80
 Identities = 159/248 (64%), Positives = 187/248 (75%), Gaps = 7/248 (2%)
 Frame = +3

Query: 87  IKAKLRFPLSLSQLRFKPYCXXXXXXXXXDVQEHEIETNNNSLT----MSPTETLVADKL 254
           IK+  R P SLSQ   K Y          +  + +  TN NS      +SP ETL+++K 
Sbjct: 11  IKSNHRLPFSLSQQIPKAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPFLSPEETLISEKF 70

Query: 255 HALIKDHHRKNPNPSLQS-PS--PDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVR 425
           H+LIKDHHRKNPNPS  S PS  PD TIP+LS+ FSQ+S   SISPS VR VIEK   VR
Sbjct: 71  HSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVR 130

Query: 426 HGIPFTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEIPI 605
           HGIP  Q L+FFNWVT  P+F  SP+ Y+EMI+LAGKVR F++AWH IDLMK+RNVEI +
Sbjct: 131 HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV 190

Query: 606 ETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFFDS 785
           +TFSILVRRYVRAGLAAEAVHAFNRMEEYGC PD++AFS+VISILC+KRRA EAQ+FFDS
Sbjct: 191 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 250

Query: 786 LKHRFEPD 809
           LK +FEPD
Sbjct: 251 LKDKFEPD 258


>ref|XP_007136124.1| hypothetical protein PHAVU_009G019800g [Phaseolus vulgaris]
           gi|561009211|gb|ESW08118.1| hypothetical protein
           PHAVU_009G019800g [Phaseolus vulgaris]
          Length = 530

 Score =  302 bits (773), Expect = 1e-79
 Identities = 144/199 (72%), Positives = 169/199 (84%), Gaps = 2/199 (1%)
 Frame = +3

Query: 219 MSPTETLVADKLHALIKDHHRKNP--NPSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVV 392
           +SP ET +ADKLHA IKDHHR+NP  NP+   P+P+L IP LS+DFS LS   ++SP+V 
Sbjct: 49  LSPEETTLADKLHAAIKDHHRRNPSPNPNAAPPTPNLAIPDLSLDFSALSAAQTLSPAVA 108

Query: 393 RRVIEKCGSVRHGIPFTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLID 572
           RRVIEKCG+VRHGIP  QSLAFFNW T+   F  SPEPY+EM+DLAGK+RHF++AWH+ID
Sbjct: 109 RRVIEKCGAVRHGIPLFQSLAFFNWATSLDGFPPSPEPYDEMLDLAGKLRHFDLAWHVID 168

Query: 573 LMKTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKR 752
           LMKTR VEI + TFS LVRRYVRAGLAAEAVHAFNRME+YGC PD+VAFS+VIS LCKKR
Sbjct: 169 LMKTRGVEISVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDKVAFSIVISSLCKKR 228

Query: 753 RAVEAQAFFDSLKHRFEPD 809
           RA EAQ+FF+SLKH+FEPD
Sbjct: 229 RANEAQSFFESLKHKFEPD 247


>ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571458531|ref|XP_006581147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 564

 Score =  301 bits (770), Expect = 2e-79
 Identities = 158/247 (63%), Positives = 181/247 (73%), Gaps = 6/247 (2%)
 Frame = +3

Query: 87  IKAKLRFPLSLSQL---RFKPYCXXXXXXXXX-DVQEHEIETNNNSLTMSPTETLVADKL 254
           IK   RF  SLS L    FKPY           D+Q    +  N    +SP ET +ADK 
Sbjct: 39  IKPSARFRHSLSPLLSPTFKPYSSSASALVPELDIQPDTPQNPN----LSPEETTLADKF 94

Query: 255 HALIKDHHRKNP--NPSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVRH 428
           HA IK+HHR+NP  NP+   P+P+LTIP LS+ FS +S    ISPSV  RVIEKCG VRH
Sbjct: 95  HAAIKEHHRRNPTPNPNAPPPTPNLTIPDLSLAFSAISAAHPISPSVAHRVIEKCGGVRH 154

Query: 429 GIPFTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEIPIE 608
           GIPF QSLAFFNW ++   F  SPEPYNEM+DLAGK+R F++AWH+IDLMK+R VEI + 
Sbjct: 155 GIPFLQSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVH 214

Query: 609 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFFDSL 788
           TFS LVRRYVRAGLAAEAVHAFNRME+YGC PD VAFS+VIS LCKKRRA EAQ+FFDSL
Sbjct: 215 TFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSL 274

Query: 789 KHRFEPD 809
           KHRFEPD
Sbjct: 275 KHRFEPD 281


>ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cicer arietinum]
          Length = 530

 Score =  295 bits (755), Expect = 1e-77
 Identities = 156/244 (63%), Positives = 187/244 (76%), Gaps = 3/244 (1%)
 Frame = +3

Query: 87  IKAKLRFPLSLSQLRFKPYCXXXXXXXXXDVQEHEI-ETNNNSLTMSPTETLVADKLHAL 263
           IK++L F L  S     P+            + ++  ET  N+  +SP E+ + DK H  
Sbjct: 4   IKSRLHFHLQHSLSPLLPHSXXXXXXSSLLSEPNDTNETPQNTTNLSPEESQIVDKFHTA 63

Query: 264 IKDHHRKNPNPSLQS--PSPDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVRHGIP 437
           IKDH+ KNPNP+     PS +L+IP LSIDF+++S + SISPS+ RRVIEKCG VRHG P
Sbjct: 64  IKDHYSKNPNPNPNPLPPSLNLSIPDLSIDFTKISTVHSISPSIARRVIEKCGGVRHGNP 123

Query: 438 FTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEIPIETFS 617
           F Q+LAFFN+ T    F  SPEPYNEMIDLAGK+RHF +AW+LIDLMK+R V+I + TF+
Sbjct: 124 FLQTLAFFNYATTLEGFPSSPEPYNEMIDLAGKLRHFELAWNLIDLMKSRGVKITVGTFA 183

Query: 618 ILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFFDSLKHR 797
           +LVRRYVRAGLAAEAVHAFNRMEEYGC PD+VAFS+VIS LCKKRRA EAQ FFDSLKHR
Sbjct: 184 VLVRRYVRAGLAAEAVHAFNRMEEYGCTPDKVAFSIVISSLCKKRRASEAQLFFDSLKHR 243

Query: 798 FEPD 809
           FEPD
Sbjct: 244 FEPD 247


>ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Populus trichocarpa]
           gi|550339796|gb|EEE94747.2| hypothetical protein
           POPTR_0005s26670g [Populus trichocarpa]
          Length = 533

 Score =  293 bits (751), Expect = 4e-77
 Identities = 152/250 (60%), Positives = 185/250 (74%), Gaps = 9/250 (3%)
 Frame = +3

Query: 87  IKAKLRFPLSLSQLRFKPYCXXXXXXXXX--------DVQEHEIETNNNSLTMSPTETLV 242
           +K KLRFP SLS    KP+                  D +EH I+T    L  SP ET V
Sbjct: 4   LKTKLRFPHSLSPHLLKPFSSSPLTTSDSNLLEDDSNDDEEHTIKTPKTPL--SPEETSV 61

Query: 243 ADKLHALIKDHHRKNPNPSLQSPSPDLTIPTLSIDFSQ-LSPIDSISPSVVRRVIEKCGS 419
           A+KLH+LIKDH+R NPN +L  P P  TIP+LS+DFSQ +S + SISPS++R VIE+ G 
Sbjct: 62  AEKLHSLIKDHYRNNPNKTLP-PDPTYTIPSLSLDFSQTISTVHSISPSIIRHVIEQSGG 120

Query: 420 VRHGIPFTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEI 599
           VRHGIP  Q LAFFNW +    F +SPE +NEM+D AGKVR F++AWH+IDLMK R+VEI
Sbjct: 121 VRHGIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEI 180

Query: 600 PIETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFF 779
            +ETFSIL+RRYVRAGLAAEA+HAFNRME+Y CKPD++AFS++ISILC+KRRA EAQ FF
Sbjct: 181 TVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFF 240

Query: 780 DSLKHRFEPD 809
           DSLK +FEPD
Sbjct: 241 DSLKDKFEPD 250


>ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutrema salsugineum]
           gi|557094185|gb|ESQ34767.1| hypothetical protein
           EUTSA_v10007329mg [Eutrema salsugineum]
          Length = 534

 Score =  281 bits (718), Expect = 3e-73
 Identities = 138/202 (68%), Positives = 168/202 (83%), Gaps = 2/202 (0%)
 Frame = +3

Query: 210 SLTMSPTETLVADKLHALIKDHHRKNP-NPSLQSPSPDLTIPTLSIDFSQLSPIDSISPS 386
           S  ++P +T   +K H++IKDH+RKNP NP+    +P  T+P+LS+DFSQ+     ISPS
Sbjct: 51  SPVLTPEDTQTIEKFHSIIKDHYRKNPTNPNDAVLNPSFTLPSLSLDFSQIDA-SRISPS 109

Query: 387 VVRRVIEKCGSVRHGIPFTQSLAFFNWVTNFPQF-QRSPEPYNEMIDLAGKVRHFNVAWH 563
           VVR VIEKCG VRHGIP  QSLAFFNW T+  ++ Q+SP PYNEMIDLAGKVRHF++AWH
Sbjct: 110 VVRCVIEKCGGVRHGIPLLQSLAFFNWATSRDEYDQKSPHPYNEMIDLAGKVRHFDLAWH 169

Query: 564 LIDLMKTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILC 743
           LIDLMK+RNVEI IETF+IL+RRYVRAGLA+EAVH FNRME+YGC PD++AFS+VISIL 
Sbjct: 170 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISILS 229

Query: 744 KKRRAVEAQAFFDSLKHRFEPD 809
           +KRRA EAQ+FFDSLK +FEPD
Sbjct: 230 RKRRASEAQSFFDSLKDKFEPD 251


>ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Capsella rubella]
           gi|482574795|gb|EOA38982.1| hypothetical protein
           CARUB_v10011494mg [Capsella rubella]
          Length = 532

 Score =  279 bits (713), Expect = 1e-72
 Identities = 137/202 (67%), Positives = 169/202 (83%), Gaps = 2/202 (0%)
 Frame = +3

Query: 210 SLTMSPTETLVADKLHALIKDHHRKNPNPSLQSP-SPDLTIPTLSIDFSQLSPIDSISPS 386
           S  ++P +T  A+KLH++IKDH+RKNP  S  +  +P LT+P+LS+DFSQ+     ISPS
Sbjct: 49  SPALTPADTQTAEKLHSIIKDHYRKNPTSSNDAVLNPSLTLPSLSLDFSQIEA-SRISPS 107

Query: 387 VVRRVIEKCGSVRHGIPFTQSLAFFNWVTNFPQF-QRSPEPYNEMIDLAGKVRHFNVAWH 563
           VV+ VIEKCG VRHGIP  QSL+FFNW T+  ++ Q+SP PYNEMIDLAGKVR F++AWH
Sbjct: 108 VVQCVIEKCGGVRHGIPLHQSLSFFNWATSRDEYDQKSPHPYNEMIDLAGKVRQFDLAWH 167

Query: 564 LIDLMKTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILC 743
           LIDLMK+RNVEI IETF+IL++RYVRAGLA+EAVH FNRME+YGC PD++AFS+VISIL 
Sbjct: 168 LIDLMKSRNVEISIETFTILIKRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISILS 227

Query: 744 KKRRAVEAQAFFDSLKHRFEPD 809
           +KRRA EAQ+FFDSLK RFEPD
Sbjct: 228 RKRRATEAQSFFDSLKDRFEPD 249


>ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336219|gb|EFH66636.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 537

 Score =  278 bits (710), Expect = 2e-72
 Identities = 139/202 (68%), Positives = 166/202 (82%), Gaps = 2/202 (0%)
 Frame = +3

Query: 210 SLTMSPTETLVADKLHALIKDHHRKNP-NPSLQSPSPDLTIPTLSIDFSQLSPIDSISPS 386
           S  ++P +T   +K H++IKDH+RKNP NP+    +P LT+P LS+DFSQ+     ISPS
Sbjct: 54  SSLLTPEDTQTVEKFHSIIKDHYRKNPTNPNDAVLNPSLTLPALSLDFSQIDA-SRISPS 112

Query: 387 VVRRVIEKCGSVRHGIPFTQSLAFFNWVTNFPQF-QRSPEPYNEMIDLAGKVRHFNVAWH 563
           VVR VIEKCGSVRHGIP  QSLAFFNW T+   + Q+SP PYNEMIDLAGKVR F++AWH
Sbjct: 113 VVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWH 172

Query: 564 LIDLMKTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILC 743
           LIDLMK+RNVEI IETF+IL+RRYVRAGLA+EAVH FNRME+YGC PD++AFS+VIS L 
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLS 232

Query: 744 KKRRAVEAQAFFDSLKHRFEPD 809
           +KRRA EAQ+FFDSLK RFEPD
Sbjct: 233 RKRRASEAQSFFDSLKDRFEPD 254


>ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Solanum tuberosum]
          Length = 549

 Score =  277 bits (709), Expect = 3e-72
 Identities = 139/201 (69%), Positives = 163/201 (81%), Gaps = 4/201 (1%)
 Frame = +3

Query: 219 MSPTETLVADKLHALIKDHHRKNPN--PSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVV 392
           +S  E  +A+K+H+LIKDHHRKNP   P+    +P++T PTLS DFS +S   SISP VV
Sbjct: 66  LSEEEAQIAEKIHSLIKDHHRKNPTATPTSIPLNPNITFPTLSFDFSSISDNRSISPPVV 125

Query: 393 RRVIEKCGSVRHGIPFTQSLAFFNW--VTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHL 566
            RVIEKCGSVRHGIPF+Q+LAFFNW  V +      +PEPYNEMIDLAGKVR F+VAWHL
Sbjct: 126 SRVIEKCGSVRHGIPFSQALAFFNWAAVRDSCGSFLNPEPYNEMIDLAGKVRQFDVAWHL 185

Query: 567 IDLMKTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCK 746
           ID MK +N++IPIETFSIL+RRYVRAGLA+EAVH FNRME+Y CKPDR AFS+VI ILCK
Sbjct: 186 IDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNRMEDYDCKPDRNAFSIVIGILCK 245

Query: 747 KRRAVEAQAFFDSLKHRFEPD 809
           KRRA EAQ+FFDSLK +FE D
Sbjct: 246 KRRAAEAQSFFDSLKDKFEAD 266


>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  277 bits (709), Expect = 3e-72
 Identities = 145/247 (58%), Positives = 177/247 (71%), Gaps = 6/247 (2%)
 Frame = +3

Query: 87  IKAKLRFPLSLSQLR------FKPYCXXXXXXXXXDVQEHEIETNNNSLTMSPTETLVAD 248
           IKA LR P  LS L       F               Q   +E +  + ++S  ET +A+
Sbjct: 4   IKASLRVPAPLSHLSPTFLRSFSSSITTSSSSSSIISQSQHLEEDYINPSLSFEETTLAN 63

Query: 249 KLHALIKDHHRKNPNPSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVRH 428
           K H+LIKDHHR+NPN SL    P+    +LS+DFS  S    +SPS+V  VIEKC +VRH
Sbjct: 64  KFHSLIKDHHRRNPNFSL----PNTPSHSLSLDFSHFST-SPVSPSLVSHVIEKCAAVRH 118

Query: 429 GIPFTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLMKTRNVEIPIE 608
           GIPF Q+L+FFNW T+ P F   PEPYNEMIDLAGKVR+F++ W +IDLMK RNVEI IE
Sbjct: 119 GIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIE 178

Query: 609 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRAVEAQAFFDSL 788
           TFSIL+RRYVRAGLA+EAVHAFNRME+Y CKPD++AFS++ISILC+KRRA EAQ+FFDSL
Sbjct: 179 TFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSL 238

Query: 789 KHRFEPD 809
           K +FEPD
Sbjct: 239 KDKFEPD 245


>ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
           gi|449519964|ref|XP_004167004.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
          Length = 534

 Score =  277 bits (708), Expect = 4e-72
 Identities = 134/197 (68%), Positives = 161/197 (81%)
 Frame = +3

Query: 219 MSPTETLVADKLHALIKDHHRKNPNPSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVVRR 398
           +SP +  V++K HALIK+++R+NP P    P P+ TI +LS D SQ+S   S+SP+VVR 
Sbjct: 55  LSPEQIQVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRY 114

Query: 399 VIEKCGSVRHGIPFTQSLAFFNWVTNFPQFQRSPEPYNEMIDLAGKVRHFNVAWHLIDLM 578
           VIEK G+VRHGIPF  +LAFFNW T    F+ SP+PYNEMIDLAGKV+ F +AW+LIDLM
Sbjct: 115 VIEKSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLM 174

Query: 579 KTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKRRA 758
           K RNVEI + TFS+LVRRYVRAGLAAEAVHAFNRME+YGC  D +AFS VISILCKKRRA
Sbjct: 175 KARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRA 234

Query: 759 VEAQAFFDSLKHRFEPD 809
           VEAQ+FFD+LKH+FEPD
Sbjct: 235 VEAQSFFDNLKHKFEPD 251


>ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Solanum lycopersicum]
          Length = 543

 Score =  276 bits (706), Expect = 6e-72
 Identities = 138/201 (68%), Positives = 160/201 (79%), Gaps = 4/201 (1%)
 Frame = +3

Query: 219 MSPTETLVADKLHALIKDHHRKNPN--PSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVV 392
           +S  E  +A+K H+LIKDHHRKNP   P+    +P++T PTLS DFS +S   SISP VV
Sbjct: 60  LSKEEAQIAEKFHSLIKDHHRKNPTATPTSIPLNPNITFPTLSFDFSSISDNRSISPPVV 119

Query: 393 RRVIEKCGSVRHGIPFTQSLAFFNWVTNFPQFQR--SPEPYNEMIDLAGKVRHFNVAWHL 566
            RVIEKCGSVRHGIPF+Q+LAFFNW           +PEPYNEMIDLAGKVR F+VAWHL
Sbjct: 120 SRVIEKCGSVRHGIPFSQALAFFNWAAARDSCGSFLNPEPYNEMIDLAGKVRQFDVAWHL 179

Query: 567 IDLMKTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCK 746
           ID MK +N++IPIETFSIL+RRYVRAGLA+EAVH FNRME+Y CKPDR AFSVV+ ILCK
Sbjct: 180 IDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNRMEDYDCKPDRNAFSVVVGILCK 239

Query: 747 KRRAVEAQAFFDSLKHRFEPD 809
           KRRA EAQ+FFDSLK +FE D
Sbjct: 240 KRRAAEAQSFFDSLKDKFEAD 260


>ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g20300, mitochondrial; Flags: Precursor
           gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity
           to a hypothetical protein T3P18.15 gi|5454201 from
           Arabidopsis thaliana BAC T3P18 gb|AC005698 and contains
           multiple PPR PF|01535 repeats [Arabidopsis thaliana]
           gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8
           [Arabidopsis thaliana] gi|15450347|gb|AAK96467.1|
           At1g20300/F14O10_8 [Arabidopsis thaliana]
           gi|332191838|gb|AEE29959.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 537

 Score =  269 bits (688), Expect = 8e-70
 Identities = 133/199 (66%), Positives = 163/199 (81%), Gaps = 2/199 (1%)
 Frame = +3

Query: 219 MSPTETLVADKLHALIKDHHRKNP-NPSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVVR 395
           ++P +T   +K H++IKDH+RKNP +P+    +P LT+  LS+DFSQ+     +SPSVVR
Sbjct: 57  LTPEDTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIET-SQVSPSVVR 115

Query: 396 RVIEKCGSVRHGIPFTQSLAFFNWVTNFPQFQ-RSPEPYNEMIDLAGKVRHFNVAWHLID 572
            VIEKCGSVRHGIP  QSLAFFNW T+   +  +SP PYNEMIDL+GKVR F++AWHLID
Sbjct: 116 CVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLID 175

Query: 573 LMKTRNVEIPIETFSILVRRYVRAGLAAEAVHAFNRMEEYGCKPDRVAFSVVISILCKKR 752
           LMK+RNVEI IETF+IL+RRYVRAGLA+EAVH FNRME+YGC PD++AFS+VIS L +KR
Sbjct: 176 LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKR 235

Query: 753 RAVEAQAFFDSLKHRFEPD 809
           RA EAQ+FFDSLK RFEPD
Sbjct: 236 RASEAQSFFDSLKDRFEPD 254