BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00036085
         (249 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]    79   6e-13
emb|CAD11838.1| reverse transcriptase [Brassica oleracea var. ra...    79   8e-13
gb|AFS30564.1| reverse transcriptase, partial [Petunia x hybrida]      78   1e-12
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]    77   2e-12
emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]    77   3e-12
emb|CAD11834.1| reverse transcriptase [Brassica nigra]                 77   3e-12
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]    76   4e-12
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]    76   5e-12
gb|ADE44149.1| reverse transcriptase [Corchorus olitorius]             75   7e-12
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    75   1e-11
emb|CAN75777.1| hypothetical protein VITISV_031053 [Vitis vinifera]    75   1e-11
emb|CAN60809.1| hypothetical protein VITISV_044451 [Vitis vinifera]    75   1e-11
gb|ABF57081.1| reverse transcriptase [Prunus mume]                     74   2e-11
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    74   2e-11
emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]    74   2e-11
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]    74   2e-11
gb|ABF57072.1| reverse transcriptase [Prunus mume]                     74   2e-11
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    74   2e-11
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...    74   3e-11
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...    74   3e-11

>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
          Length = 1312

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 41/82 (50%), Positives = 50/82 (60%)
 Frame = -1

Query: 249  FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYKCXXXXXX 70
            FED   PT VC+L K LYGLKQ PRAWFHKLSS LLQ GF CS++D+S+F +        
Sbjct: 929  FEDNSCPTHVCRLQKALYGLKQAPRAWFHKLSSFLLQIGFQCSRADASLFYFHSASDIII 988

Query: 69   XXXXXXXXXITGSCYARITTLI 4
                     ITGS  +R+  +I
Sbjct: 989  LLIYVDDILITGSNPSRVHQII 1010


>emb|CAD11838.1| reverse transcriptase [Brassica oleracea var. ramosa]
          Length = 87

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 33/53 (62%), Positives = 42/53 (79%)
 Frame = -1

Query: 249 FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYK 91
           FEDK HP  VC L+KV+YGLKQ PRAWF K SS L+++GF+C+ S  S+FVY+
Sbjct: 20  FEDKEHPQYVCNLHKVIYGLKQTPRAWFDKFSSFLIEFGFICNSSHPSLFVYQ 72


>gb|AFS30564.1| reverse transcriptase, partial [Petunia x hybrida]
          Length = 87

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 34/54 (62%), Positives = 43/54 (79%)
 Frame = -1

Query: 249 FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYKC 88
           F D  +PT VC+L+K LYGLKQ PRAWF +LSS L ++GF+ SKSDSS+F+ KC
Sbjct: 20  FTDPRYPTHVCRLHKALYGLKQAPRAWFERLSSALFEYGFVSSKSDSSLFIRKC 73


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/82 (45%), Positives = 52/82 (63%)
 Frame = -1

Query: 249  FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYKCXXXXXX 70
            F +  +P+ VCKLNK LYGLKQ PRAW++KLS+ LL WGF  S++DSSMF++        
Sbjct: 842  FINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVLI 901

Query: 69   XXXXXXXXXITGSCYARITTLI 4
                     +TGS  A++++ I
Sbjct: 902  LLIYVDDILVTGSSSAQVSSFI 923


>emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]
          Length = 1556

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/81 (45%), Positives = 48/81 (59%)
 Frame = -1

Query: 243  DKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYKCXXXXXXXX 64
            D  HPT VCKL K LYGLKQ PRAWF + S+ LL++GF CS +D S+F++          
Sbjct: 1137 DLEHPTHVCKLQKALYGLKQAPRAWFDRFSAFLLKYGFFCSLADPSLFIFHSNLGSLILL 1196

Query: 63   XXXXXXXITGSCYARITTLIQ 1
                   +TGS  A ++T IQ
Sbjct: 1197 LYVDDILLTGSSTALVSTFIQ 1217


>emb|CAD11834.1| reverse transcriptase [Brassica nigra]
          Length = 88

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 33/53 (62%), Positives = 40/53 (75%)
 Frame = -1

Query: 249 FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYK 91
           FEDK HP  VC L+K +YGLKQ PRAWF K SS LL++GF C+  D S+FVY+
Sbjct: 20  FEDKAHPDYVCLLHKAIYGLKQAPRAWFDKFSSFLLEFGFQCNVKDPSLFVYQ 72


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/83 (46%), Positives = 45/83 (54%)
 Frame = -1

Query: 249 FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYKCXXXXXX 70
           F    HP  VCKL K LYGLKQ PR WFHKL   L  WGF+ S SD+S+F+YK       
Sbjct: 622 FVSTSHPQHVCKLQKALYGLKQAPRVWFHKLREALHTWGFISSTSDTSLFIYKHNGNFLL 681

Query: 69  XXXXXXXXXITGSCYARITTLIQ 1
                    ITG+    + TLIQ
Sbjct: 682 LLVYVDDLLITGNNVPLVQTLIQ 704


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 40/82 (48%), Positives = 50/82 (60%)
 Frame = -1

Query: 249 FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYKCXXXXXX 70
           FED   PT VC+L K LYGLKQ PRAWFHKLSS LLQ GF CS++++S+F +        
Sbjct: 675 FEDSSCPTHVCRLQKALYGLKQGPRAWFHKLSSFLLQIGFQCSRANASLFYFHSASDIII 734

Query: 69  XXXXXXXXXITGSCYARITTLI 4
                    ITGS  +R+  +I
Sbjct: 735 LLIYVDDILITGSNPSRVHQII 756


>gb|ADE44149.1| reverse transcriptase [Corchorus olitorius]
          Length = 87

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 32/53 (60%), Positives = 43/53 (81%)
 Frame = -1

Query: 249 FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYK 91
           F D+ HPT VCKL+K LYGLKQ PRAW++ L S L+++GF  S+SDSS+F++K
Sbjct: 20  FIDQTHPTYVCKLDKALYGLKQAPRAWYNTLKSFLIRYGFSQSRSDSSLFIFK 72


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/80 (47%), Positives = 48/80 (60%)
 Frame = -1

Query: 243  DKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYKCXXXXXXXX 64
            D   P  VC+L K LYGLKQ PRAWF +LSS LLQWGF  S++DSSMF++          
Sbjct: 1020 DPQFPNRVCRLKKALYGLKQAPRAWFQRLSSALLQWGFSMSRTDSSMFLHFGKATTLIVL 1079

Query: 63   XXXXXXXITGSCYARITTLI 4
                   +TGS   +I++LI
Sbjct: 1080 VYVDDILVTGSSSTQISSLI 1099


>emb|CAN75777.1| hypothetical protein VITISV_031053 [Vitis vinifera]
          Length = 742

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/78 (50%), Positives = 44/78 (56%)
 Frame = -1

Query: 234 HPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYKCXXXXXXXXXXX 55
           HP  VCKL KVLYGLKQ PRAWFHKL   L  W F+ S SD+ +F+YK            
Sbjct: 409 HPQYVCKLQKVLYGLKQAPRAWFHKLKDALHTWRFISSTSDTYLFIYKHNGNFLLLLVYV 468

Query: 54  XXXXITGSCYARITTLIQ 1
               ITG+    I TLIQ
Sbjct: 469 DDLLITGNNAPLIQTLIQ 486


>emb|CAN60809.1| hypothetical protein VITISV_044451 [Vitis vinifera]
          Length = 377

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 36/81 (44%), Positives = 48/81 (59%)
 Frame = -1

Query: 243 DKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYKCXXXXXXXX 64
           D  HPT VCKL K LYGLKQ PRAWF + S+ LL++GF CS ++ S+F++          
Sbjct: 117 DLEHPTHVCKLQKALYGLKQAPRAWFDRFSAFLLKYGFFCSLANPSLFIFHSNLGTLILL 176

Query: 63  XXXXXXXITGSCYARITTLIQ 1
                  +TGS  A ++T IQ
Sbjct: 177 LYVDDMLLTGSSTALVSTFIQ 197


>gb|ABF57081.1| reverse transcriptase [Prunus mume]
          Length = 88

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 32/53 (60%), Positives = 41/53 (77%)
 Frame = -1

Query: 249 FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYK 91
           F D   P  VCKL+K LYGLKQ PRAWFH++SS LL +GF  S+SDSS+F+++
Sbjct: 20  FVDPTRPNYVCKLHKALYGLKQAPRAWFHRISSFLLSFGFQHSQSDSSLFIFR 72


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/82 (45%), Positives = 50/82 (60%)
 Frame = -1

Query: 249 FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYKCXXXXXX 70
           F +   P+ VCKLNK LYGLKQ PRAW+ KLS+ LL WGF  S++DSSMF++        
Sbjct: 600 FINSQFPSHVCKLNKALYGLKQAPRAWYTKLSTSLLGWGFQASRADSSMFIHHSTHDVLI 659

Query: 69  XXXXXXXXXITGSCYARITTLI 4
                    +TGS  A++++ I
Sbjct: 660 LLIYVDDILVTGSNSAQVSSFI 681


>emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]
          Length = 1319

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = -1

Query: 243  DKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVY 94
            D   PT VC+L K LYGLKQ PRAWF +LSS L+QWGF  S++DSSMF++
Sbjct: 952  DTTFPTKVCRLKKALYGLKQAPRAWFQRLSSALIQWGFSNSRTDSSMFLH 1001


>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
          Length = 1635

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = -1

Query: 243 DKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVY 94
           D   PT VC+L K LYGLKQ PRAWF +LSS L+QWGF  S++DSSMF++
Sbjct: 814 DTTFPTKVCRLKKALYGLKQAPRAWFQRLSSALIQWGFSNSRTDSSMFLH 863


>gb|ABF57072.1| reverse transcriptase [Prunus mume]
          Length = 88

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/53 (67%), Positives = 39/53 (73%)
 Frame = -1

Query: 249 FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVYK 91
           F D  HP  VCKL+K +YGLKQ PRAWFH  SS LL+ GF  SK DSSMFVYK
Sbjct: 20  FVDPSHPHHVCKLHKAIYGLKQAPRAWFHCFSSFLLRVGFDNSKDDSSMFVYK 72


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 33/52 (63%), Positives = 40/52 (76%)
 Frame = -1

Query: 249  FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVY 94
            F DK  PT VC L+K +YGLKQ PRAWF K S+ LL++GF CSKSD S+F+Y
Sbjct: 1055 FVDKSKPTHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIY 1106


>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = -1

Query: 249  FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVY 94
            FED   P  VCKL K +Y LKQ PRAWF K SS LL++GF+CS SD S+FVY
Sbjct: 927  FEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFVY 978


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7267767|emb|CAB81170.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1515

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = -1

Query: 249  FEDKVHPTLVCKLNKVLYGLKQVPRAWFHKLSSVLLQWGFLCSKSDSSMFVY 94
            FED   P  VCKL K +Y LKQ PRAWF K SS LL++GF+CS SD S+FVY
Sbjct: 1050 FEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFVY 1101