BLASTX nr result
ID: Cocculus23_contig00036064
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00036064
(280 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 109 5e-22
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 107 2e-21
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 106 4e-21
ref|XP_006478657.1| PREDICTED: uncharacterized protein LOC102627... 105 5e-21
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 105 7e-21
gb|AHN13809.1| movement protein [Aristotelia chilensis vein clea... 105 9e-21
ref|XP_006398032.1| hypothetical protein EUTSA_v10001266mg [Eutr... 103 2e-20
ref|XP_002307276.1| hypothetical protein POPTR_0005s18370g [Popu... 101 1e-19
ref|XP_006494615.1| PREDICTED: uncharacterized protein LOC102626... 100 4e-19
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar... 100 4e-19
ref|YP_008992017.1| viral movement protein [Citrus endogenous pa... 99 6e-19
ref|XP_002891104.1| hypothetical protein ARALYDRAFT_336508 [Arab... 96 4e-18
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 96 5e-18
ref|XP_002893824.1| hypothetical protein ARALYDRAFT_891051 [Arab... 96 5e-18
ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Popu... 95 9e-18
ref|XP_006405134.1| hypothetical protein EUTSA_v100007052mg, par... 91 1e-16
ref|XP_006378933.1| hypothetical protein POPTR_0009s00900g [Popu... 91 1e-16
ref|XP_007036219.1| Uncharacterized protein TCM_012065 [Theobrom... 91 1e-16
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 91 2e-16
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 91 2e-16
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 109 bits (272), Expect = 5e-22
Identities = 52/91 (57%), Positives = 68/91 (74%)
Frame = +3
Query: 6 ELITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLN 185
ELI+ W +GYTHLHLG +RL LTLHGR LPV A LA+LD F Y+ A+IG+++TTL+
Sbjct: 113 ELISNWKREGYTHLHLGGIRLILTLHGRKGLPVTARLAMLDTRFKQYQDAVIGTVLTTLH 172
Query: 186 SDTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
+ + L T P+FN+SL DP +PT +VQVQI
Sbjct: 173 AGSVLLTFYPNFNLSLQDPNLPTTLKVQVQI 203
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 107 bits (267), Expect = 2e-21
Identities = 51/91 (56%), Positives = 68/91 (74%)
Frame = +3
Query: 6 ELITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLN 185
ELI+ W +GYTHLHLG +RL LTLHGR LPV A +ALLD F ++ A+IG+++TTL+
Sbjct: 113 ELISNWKREGYTHLHLGGIRLILTLHGRKGLPVTARVALLDTRFKQFQDAVIGTVLTTLH 172
Query: 186 SDTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
+ + L T P+FN+SL DP +PT +VQVQI
Sbjct: 173 AGSVLLTFYPNFNLSLQDPNLPTTLKVQVQI 203
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 106 bits (264), Expect = 4e-21
Identities = 51/91 (56%), Positives = 67/91 (73%)
Frame = +3
Query: 6 ELITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLN 185
ELI+ W +GYTHLHLG +RL LTLHGR LPV A +ALLD F ++ A+IG+++TTL+
Sbjct: 113 ELISNWKREGYTHLHLGGIRLILTLHGRKGLPVTARVALLDTRFKQFQDAVIGTVLTTLH 172
Query: 186 SDTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
+ L T P+FN+SL DP +PT +VQVQI
Sbjct: 173 VGSVLLTFYPNFNLSLQDPNLPTTLKVQVQI 203
>ref|XP_006478657.1| PREDICTED: uncharacterized protein LOC102627366 [Citrus sinensis]
Length = 345
Score = 105 bits (263), Expect = 5e-21
Identities = 49/91 (53%), Positives = 68/91 (74%)
Frame = +3
Query: 6 ELITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLN 185
+L++ W +GYTHLHLG VRL TLHGR LPV A LALLD F Y+HA+IG+++TTL+
Sbjct: 126 DLVSHWKREGYTHLHLGGVRLIRTLHGRKRLPVTARLALLDTRFKEYQHAVIGTVLTTLH 185
Query: 186 SDTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
+ + L T P+FN+SL+ P +PT +VQ+Q+
Sbjct: 186 AGSVLLTFYPNFNLSLDAPNLPTTLKVQIQL 216
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 105 bits (262), Expect = 7e-21
Identities = 49/90 (54%), Positives = 71/90 (78%)
Frame = +3
Query: 9 LITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLNS 188
LI W ++GY LH GAVRL L+LHGR +LPV +ALLD +++ YE+A+IG+++T+L++
Sbjct: 111 LINHWKSEGYIALHFGAVRLILSLHGRKNLPVFCKIALLDSSYLHYENAVIGTVLTSLHA 170
Query: 189 DTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
+ + TI P++NVSLND T+PTR +VQVQI
Sbjct: 171 GSVVLTIFPNYNVSLNDSTLPTRLKVQVQI 200
>gb|AHN13809.1| movement protein [Aristotelia chilensis vein clearing virus]
Length = 820
Score = 105 bits (261), Expect = 9e-21
Identities = 48/88 (54%), Positives = 66/88 (75%)
Frame = +3
Query: 15 TRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLNSDT 194
++W+A+G+THLH GAVRLALT HGR LP+ + +ALLD F+ Y+HA IG++ TTLN+ T
Sbjct: 130 SQWIAEGFTHLHFGAVRLALTFHGRKGLPISSRIALLDSRFLEYQHACIGTIETTLNAGT 189
Query: 195 TLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
T+ P+FN+ L DP + T +VQVQI
Sbjct: 190 VFVTLFPNFNMPLKDPHLLTALKVQVQI 217
>ref|XP_006398032.1| hypothetical protein EUTSA_v10001266mg [Eutrema salsugineum]
gi|557099114|gb|ESQ39485.1| hypothetical protein
EUTSA_v10001266mg [Eutrema salsugineum]
Length = 492
Score = 103 bits (258), Expect = 2e-20
Identities = 48/90 (53%), Positives = 65/90 (72%)
Frame = +3
Query: 9 LITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLNS 188
++ +W GYTHLH GA+RLALTLHGR DLPV+A +ALLD + Y+HA I ++ TTL++
Sbjct: 100 MVHQWKTHGYTHLHYGAIRLALTLHGRKDLPVVARVALLDTRYREYQHACIATIQTTLDA 159
Query: 189 DTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
T T+ P+FN+SL DP I Q+Q+QI
Sbjct: 160 GTVFVTLYPNFNISLEDPQIFQNMQIQLQI 189
>ref|XP_002307276.1| hypothetical protein POPTR_0005s18370g [Populus trichocarpa]
gi|222856725|gb|EEE94272.1| hypothetical protein
POPTR_0005s18370g [Populus trichocarpa]
Length = 667
Score = 101 bits (251), Expect = 1e-19
Identities = 47/91 (51%), Positives = 66/91 (72%)
Frame = +3
Query: 6 ELITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLN 185
E + +W++ GYTH+H GA+RLAL+ HG+ LPV A LALLD ++ Y+HA IGSL TTLN
Sbjct: 118 EFLGQWISQGYTHIHFGAIRLALSYHGQKGLPVAARLALLDTRYLEYQHACIGSLETTLN 177
Query: 186 SDTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
T + T P+FN++L+DP + +VQ+QI
Sbjct: 178 CGTVVVTFYPNFNMALDDPQLHHFLKVQLQI 208
>ref|XP_006494615.1| PREDICTED: uncharacterized protein LOC102626000 [Citrus sinensis]
Length = 449
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/81 (58%), Positives = 60/81 (74%)
Frame = +3
Query: 6 ELITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLN 185
+LI +W +GYTHLHLG VRL LTLHGR LPV A LALLD F Y+HA+IG+++TTL+
Sbjct: 367 DLIAQWQREGYTHLHLGGVRLILTLHGRKGLPVTASLALLDTRFKEYQHAVIGTVLTTLH 426
Query: 186 SDTTLFTIAPDFNVSLNDPTI 248
+ L T P+FN+SL DP +
Sbjct: 427 AGNALLTFYPNFNLSLQDPNL 447
>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1645
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/90 (52%), Positives = 68/90 (75%)
Frame = +3
Query: 9 LITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLNS 188
LI W +GYT LH G V L L+LHGR +LPV +ALLD +++ YE+A+IG+++T+L++
Sbjct: 111 LINHWKNEGYTALHFGVVGLILSLHGRKNLPVFCKIALLDSSYLHYENAVIGTILTSLHA 170
Query: 189 DTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
+ + TI P++NVSLND T+ TR +VQVQI
Sbjct: 171 GSVVLTIFPNYNVSLNDSTLSTRLKVQVQI 200
>ref|YP_008992017.1| viral movement protein [Citrus endogenous pararetrovirus]
Length = 114
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/83 (56%), Positives = 63/83 (75%)
Frame = +3
Query: 30 DGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLNSDTTLFTI 209
+GYTHLHLG +RL LTLHGR LPV A +ALLD F ++ A+IG+++TTL++ + L T
Sbjct: 3 EGYTHLHLGGIRLILTLHGRKGLPVTARVALLDTRFKQFQDAVIGTVLTTLHAGSVLLTF 62
Query: 210 APDFNVSLNDPTIPTRFQVQVQI 278
P+FN+SL DP +PT +VQVQI
Sbjct: 63 YPNFNLSLQDPNLPTTLKVQVQI 85
>ref|XP_002891104.1| hypothetical protein ARALYDRAFT_336508 [Arabidopsis lyrata subsp.
lyrata] gi|297336946|gb|EFH67363.1| hypothetical protein
ARALYDRAFT_336508 [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/87 (52%), Positives = 61/87 (70%)
Frame = +3
Query: 18 RWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLNSDTT 197
+W A YTHLH GA+RLALTLHGR L V+A +ALLD + Y+HA I ++ TTLN+ T
Sbjct: 50 QWRAHDYTHLHYGAIRLALTLHGRKGLHVVARVALLDTRYREYQHACIATIQTTLNAGTV 109
Query: 198 LFTIAPDFNVSLNDPTIPTRFQVQVQI 278
T+ P+FNV+L DP + Q+Q+QI
Sbjct: 110 FVTLFPNFNVALEDPHVYQNMQIQLQI 136
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema
salsugineum] gi|557090298|gb|ESQ31006.1| hypothetical
protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/92 (50%), Positives = 61/92 (66%)
Frame = +3
Query: 3 PELITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTL 182
P + GYTHLH GA+RLALTLH R LPV+A +ALLD + Y+HA I ++ TT+
Sbjct: 68 PLCFNEGMTHGYTHLHYGAIRLALTLHARKGLPVVARVALLDTRYREYQHACIATIQTTM 127
Query: 183 NSDTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
N+ T T+ P+FN+SL DP I Q+Q+QI
Sbjct: 128 NAGTIFVTLYPNFNISLEDPQIFQNMQIQLQI 159
>ref|XP_002893824.1| hypothetical protein ARALYDRAFT_891051 [Arabidopsis lyrata subsp.
lyrata] gi|297339666|gb|EFH70083.1| hypothetical protein
ARALYDRAFT_891051 [Arabidopsis lyrata subsp. lyrata]
Length = 291
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/90 (50%), Positives = 62/90 (68%)
Frame = +3
Query: 9 LITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLNS 188
+I +W A GYTHLH GA+R+ALTL+GR LP++ +ALLD + Y+H I ++ TTLN+
Sbjct: 103 MIHQWRAYGYTHLHYGAIRVALTLYGRKGLPIVVRVALLDTRYREYQHTYIATIQTTLNA 162
Query: 189 DTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
T T+ P+FNV L DP I Q+Q+QI
Sbjct: 163 STIFVTLFPNFNVVLEDPQIYQNMQIQLQI 192
>ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Populus trichocarpa]
gi|222860472|gb|EEE98019.1| hypothetical protein
POPTR_0011s07150g [Populus trichocarpa]
Length = 950
Score = 95.1 bits (235), Expect = 9e-18
Identities = 44/87 (50%), Positives = 63/87 (72%)
Frame = +3
Query: 18 RWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLNSDTT 197
+W++ GYTH++ GA+RLAL+ HGR LPV A LALLD ++ Y+HA IGSL TTL+
Sbjct: 73 QWISQGYTHIYFGAIRLALSYHGRKGLPVAAQLALLDTRYLEYQHACIGSLKTTLDCGMV 132
Query: 198 LFTIAPDFNVSLNDPTIPTRFQVQVQI 278
+ T P+FN++L+DP + +VQ+QI
Sbjct: 133 VVTFYPNFNMALDDPQLHNFLKVQLQI 159
>ref|XP_006405134.1| hypothetical protein EUTSA_v100007052mg, partial [Eutrema
salsugineum] gi|557106262|gb|ESQ46587.1| hypothetical
protein EUTSA_v100007052mg, partial [Eutrema
salsugineum]
Length = 543
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/86 (50%), Positives = 57/86 (66%)
Frame = +3
Query: 21 WLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLNSDTTL 200
W GYTHLH G VR+ LTLH R LPV+A +AL+D Y+ A IG++ TTLN+ T
Sbjct: 2 WQQQGYTHLHFGVVRIGLTLHARKGLPVVARIALVDSRLKSYQQACIGTVQTTLNAGTVF 61
Query: 201 FTIAPDFNVSLNDPTIPTRFQVQVQI 278
T+ P+FNVSL DP + +VQ+Q+
Sbjct: 62 VTLFPNFNVSLQDPNLLKTLKVQLQL 87
>ref|XP_006378933.1| hypothetical protein POPTR_0009s00900g [Populus trichocarpa]
gi|550330770|gb|ERP56730.1| hypothetical protein
POPTR_0009s00900g [Populus trichocarpa]
Length = 335
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/94 (48%), Positives = 63/94 (67%), Gaps = 7/94 (7%)
Frame = +3
Query: 18 RWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNF-------I*YEHALIGSLVT 176
+W++ GYTH+H A+RLAL+ HGR LPV A LALLD + + Y+HA IGSL T
Sbjct: 122 QWISQGYTHIHFCAIRLALSYHGRKGLPVAARLALLDTRYPLLDTRYLEYQHACIGSLQT 181
Query: 177 TLNSDTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
TLN T + T P+FN++L+DP + +VQ+QI
Sbjct: 182 TLNCGTVVVTFYPNFNMALDDPQLHNFLKVQLQI 215
>ref|XP_007036219.1| Uncharacterized protein TCM_012065 [Theobroma cacao]
gi|508773464|gb|EOY20720.1| Uncharacterized protein
TCM_012065 [Theobroma cacao]
Length = 280
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/91 (47%), Positives = 62/91 (68%)
Frame = +3
Query: 6 ELITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLN 185
E +W+ GY+H+H GAVRLAL HGR V+A +ALLD +I YEHA IG++ TLN
Sbjct: 110 EFPQQWIHHGYSHIHFGAVRLALNYHGREGQSVVAHMALLDSRYIKYEHACIGTVEDTLN 169
Query: 186 SDTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
+ T + T+ P++ ++L DP + + +VQVQI
Sbjct: 170 TKTLIVTLFPNYTMALCDPNLLSALKVQVQI 200
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/91 (45%), Positives = 61/91 (67%)
Frame = +3
Query: 6 ELITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLN 185
E + W + +TH+H GAV++ALT HGR PV+A LALLD ++ Y+HA +G+ TLN
Sbjct: 113 EFASHWKSHQFTHIHFGAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLN 172
Query: 186 SDTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
+ T T+ P+F +SL+D + T ++QVQI
Sbjct: 173 AGTVFITLFPNFTMSLSDANLSTALKIQVQI 203
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/91 (45%), Positives = 61/91 (67%)
Frame = +3
Query: 6 ELITRWLADGYTHLHLGAVRLALTLHGRTDLPVIAFLALLDFNFI*YEHALIGSLVTTLN 185
E + W + +TH+H GAV++ALT HGR PV+A LALLD ++ Y+HA +G+ TLN
Sbjct: 113 EFASHWKSHQFTHIHFGAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLN 172
Query: 186 SDTTLFTIAPDFNVSLNDPTIPTRFQVQVQI 278
+ T T+ P+F +SL+D + T ++QVQI
Sbjct: 173 AGTVFITLFPNFTMSLSDANLSTALKIQVQI 203