BLASTX nr result
ID: Cocculus23_contig00035987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00035987
(373 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat... 74 3e-11
ref|XP_006465137.1| PREDICTED: putative pentatricopeptide repeat... 72 8e-11
ref|XP_007011398.1| Pentatricopeptide repeat superfamily protein... 70 3e-10
ref|XP_007011397.1| Pentatricopeptide repeat superfamily protein... 70 3e-10
ref|XP_007217131.1| hypothetical protein PRUPE_ppa015612m2g, par... 65 1e-08
gb|EYU21206.1| hypothetical protein MIMGU_mgv11b002092mg [Mimulu... 63 4e-08
tpg|DAA46501.1| TPA: hypothetical protein ZEAMMB73_380894 [Zea m... 63 4e-08
ref|XP_006365279.1| PREDICTED: putative pentatricopeptide repeat... 62 6e-08
ref|XP_004229567.1| PREDICTED: putative pentatricopeptide repeat... 62 6e-08
ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat... 62 6e-08
ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat... 62 6e-08
ref|XP_002464868.1| hypothetical protein SORBIDRAFT_01g027870 [S... 62 6e-08
ref|XP_004962380.1| PREDICTED: putative pentatricopeptide repeat... 60 3e-07
ref|XP_003574395.1| PREDICTED: putative pentatricopeptide repeat... 60 3e-07
gb|AAG46167.1|AC018727_19 unknown protein [Oryza sativa Japonica... 59 7e-07
gb|EEE51466.1| hypothetical protein OsJ_32592 [Oryza sativa Japo... 59 7e-07
gb|EAY79643.1| hypothetical protein OsI_34787 [Oryza sativa Indi... 59 7e-07
gb|AAP55169.2| pentatricopeptide, putative, expressed [Oryza sat... 59 7e-07
>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
unnamed protein product [Vitis vinifera]
Length = 659
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 4/69 (5%)
Frame = -2
Query: 198 TLSN--QIPK-TAQNSAFPVRN-WVALTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFH 31
+LSN Q PK T +N FP + + LT ++ESTLL+CPSD+IALSFFLWC +QP++FH
Sbjct: 28 SLSNHPQNPKFTRENHNFPEKKPGLVLTDQLLESTLLNCPSDLIALSFFLWCAKQPNFFH 87
Query: 30 DARSFDVMV 4
R+FD MV
Sbjct: 88 HRRAFDHMV 96
>ref|XP_006465137.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like isoform X1 [Citrus sinensis]
gi|568821338|ref|XP_006465138.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g16830-like isoform X2 [Citrus sinensis]
gi|568821340|ref|XP_006465139.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g16830-like isoform X3 [Citrus sinensis]
Length = 645
Score = 72.0 bits (175), Expect = 8e-11
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = -2
Query: 138 VALTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMV 4
+ L P +V STLL+CPSD+IALSFF+WC +Q DYFHD +SFD M+
Sbjct: 46 IILAPQIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMI 90
>ref|XP_007011398.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
[Theobroma cacao] gi|508728311|gb|EOY20208.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 2 [Theobroma cacao]
Length = 657
Score = 70.1 bits (170), Expect = 3e-10
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = -2
Query: 138 VALTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMV 4
+ +TP +V STL++CPS++IAL FFLWC +QP+YFHD +FD MV
Sbjct: 51 LTITPQIVHSTLVNCPSNLIALGFFLWCAKQPNYFHDGEAFDCMV 95
>ref|XP_007011397.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
[Theobroma cacao] gi|508728310|gb|EOY20207.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 695
Score = 70.1 bits (170), Expect = 3e-10
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = -2
Query: 138 VALTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMV 4
+ +TP +V STL++CPS++IAL FFLWC +QP+YFHD +FD MV
Sbjct: 89 LTITPQIVHSTLVNCPSNLIALGFFLWCAKQPNYFHDGEAFDCMV 133
>ref|XP_007217131.1| hypothetical protein PRUPE_ppa015612m2g, partial [Prunus persica]
gi|462413281|gb|EMJ18330.1| hypothetical protein
PRUPE_ppa015612m2g, partial [Prunus persica]
Length = 261
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = -2
Query: 192 SNQIPKTAQNSAFPVRNWVALTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFD 13
+N+ K + + P R+ LT V STLL+CPSD+IAL FFLWC +QP++FH+ FD
Sbjct: 15 TNKTKKIFRENLDPERSKCTLTHQNVHSTLLNCPSDLIALRFFLWCAQQPNFFHNRIVFD 74
Query: 12 VMV 4
MV
Sbjct: 75 HMV 77
>gb|EYU21206.1| hypothetical protein MIMGU_mgv11b002092mg [Mimulus guttatus]
Length = 655
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = -2
Query: 204 IQTLSNQIPKTAQNSAFPVRNW--VALTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFH 31
+ T +N K+ N P N + LT +V +TL +CPSD++ALSFFLWC RQP YFH
Sbjct: 35 LSTDTNPRFKSFSNQQQPSHNPQPIFLTHQIVLTTLQNCPSDLVALSFFLWCARQPHYFH 94
Query: 30 DARSFDVMV 4
D +F MV
Sbjct: 95 DKPTFRHMV 103
>tpg|DAA46501.1| TPA: hypothetical protein ZEAMMB73_380894 [Zea mays]
Length = 625
Score = 63.2 bits (152), Expect = 4e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = -2
Query: 129 TPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMVP 1
TP +VE+ + CPSD IALSFFLWC R+P YFH SFD ++P
Sbjct: 31 TPQIVEAAVARCPSDGIALSFFLWCARRPGYFHPPSSFDRLLP 73
>ref|XP_006365279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like isoform X1 [Solanum tuberosum]
gi|565399483|ref|XP_006365280.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g16830-like isoform X2 [Solanum tuberosum]
Length = 657
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -2
Query: 156 FPVRNWVALTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHD 28
FP + LTP +V +TL +C SD++A SFFLWC RQP+YFHD
Sbjct: 51 FPENPRIILTPRIVHTTLSNCRSDILAFSFFLWCARQPNYFHD 93
>ref|XP_004229567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Solanum lycopersicum]
Length = 715
Score = 62.4 bits (150), Expect = 6e-08
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = -2
Query: 153 PVRNWVALTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMV 4
P + + LTP++V +T+ +C SD++A SFFLWC RQP+YFHD + ++V
Sbjct: 52 PENSRIILTPTIVHTTISNCHSDILAFSFFLWCARQPNYFHDRGTLTLIV 101
>ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Cucumis sativus]
Length = 525
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = -2
Query: 156 FPVRNWVALTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMV 4
F V LT +V +TLL+C SD+IALSFF+WC +QP++FH+ +FD MV
Sbjct: 52 FSENRQVILTNDLVYTTLLNCSSDLIALSFFMWCAKQPNFFHNPAAFDYMV 102
>ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Cucumis sativus]
Length = 665
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = -2
Query: 156 FPVRNWVALTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMV 4
F V LT +V +TLL+C SD+IALSFF+WC +QP++FH+ +FD MV
Sbjct: 52 FSENRQVILTNDLVYTTLLNCSSDLIALSFFMWCAKQPNFFHNPAAFDYMV 102
>ref|XP_002464868.1| hypothetical protein SORBIDRAFT_01g027870 [Sorghum bicolor]
gi|241918722|gb|EER91866.1| hypothetical protein
SORBIDRAFT_01g027870 [Sorghum bicolor]
Length = 594
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -2
Query: 129 TPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMVP 1
TP +VE+ + CPSD +ALSFFLWC R+P YFH SFD ++P
Sbjct: 35 TPQIVEAAVARCPSDGLALSFFLWCARRPGYFHPPSSFDRLLP 77
>ref|XP_004962380.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like isoform X1 [Setaria italica]
Length = 631
Score = 60.1 bits (144), Expect = 3e-07
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = -2
Query: 126 PSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMVP 1
P +V++ + CPSD +ALSFFLWC R+P YFH SFD ++P
Sbjct: 35 PQIVDAAVSRCPSDALALSFFLWCARRPGYFHPPSSFDRLLP 76
>ref|XP_003574395.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Brachypodium distachyon]
Length = 623
Score = 60.1 bits (144), Expect = 3e-07
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = -2
Query: 132 LTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMVP 1
L+P +V++ + CPSD +ALSFFLWC R+P YFH SFD ++P
Sbjct: 30 LSPRLVDAAVSRCPSDALALSFFLWCARRPAYFHPPSSFDRVLP 73
>gb|AAG46167.1|AC018727_19 unknown protein [Oryza sativa Japonica Group]
Length = 601
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = -2
Query: 132 LTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMVP 1
L+P +V++T+ CPSD +A++FFLWC R P YFH SFD ++P
Sbjct: 37 LSPRLVDATVSRCPSDALAITFFLWCARCPAYFHPPSSFDRLLP 80
>gb|EEE51466.1| hypothetical protein OsJ_32592 [Oryza sativa Japonica Group]
Length = 706
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = -2
Query: 132 LTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMVP 1
L+P +V++T+ CPSD +A++FFLWC R P YFH SFD ++P
Sbjct: 112 LSPRLVDATVSRCPSDALAITFFLWCARCPAYFHPPSSFDRLLP 155
>gb|EAY79643.1| hypothetical protein OsI_34787 [Oryza sativa Indica Group]
Length = 631
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = -2
Query: 132 LTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMVP 1
L+P +V++T+ CPSD +A++FFLWC R P YFH SFD ++P
Sbjct: 37 LSPRLVDATVSRCPSDALAITFFLWCARCPAYFHPPSSFDRLLP 80
>gb|AAP55169.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 631
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = -2
Query: 132 LTPSVVESTLLSCPSDVIALSFFLWCGRQPDYFHDARSFDVMVP 1
L+P +V++T+ CPSD +A++FFLWC R P YFH SFD ++P
Sbjct: 37 LSPRLVDATVSRCPSDALAITFFLWCARCPAYFHPPSSFDRLLP 80