BLASTX nr result

ID: Cocculus23_contig00035958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00035958
         (514 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006368383.1| hypothetical protein POPTR_0001s02280g [Popu...    64   2e-08
ref|XP_007040631.1| Uncharacterized protein TCM_016545 [Theobrom...    55   8e-06

>ref|XP_006368383.1| hypothetical protein POPTR_0001s02280g [Populus trichocarpa]
           gi|550346296|gb|ERP64952.1| hypothetical protein
           POPTR_0001s02280g [Populus trichocarpa]
          Length = 321

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
 Frame = -1

Query: 385 DNKGGQVEKDGRIKEEKEMDSLEKPMASSKRTYKTKPTVPRPFSLATDKRMTRERFGGSD 206
           DNK  Q +K G      + D  +KP  + K+  K K TVP+PFSLATDKRM+RER    D
Sbjct: 72  DNKQSQAKKVG----VNQADIAKKPKQAPKQIPKMKITVPQPFSLATDKRMSRERRASVD 127

Query: 205 QPKQTVVLLCKSTSLNMKAGTQILAR---STESRRENTIPL--RNTFSSNGHDEKQKENC 41
                +  L KS S+N K  +   A+   +++ +R  T     R   +S   D+K+ EN 
Sbjct: 128 FKDLQLPKLSKSASVNYKVQSSPSAKDLVASKLKRSATTASNPRPRVTSTKTDDKKVENG 187

Query: 40  SKVKAKAQ 17
            K K K Q
Sbjct: 188 VKTKEKIQ 195


>ref|XP_007040631.1| Uncharacterized protein TCM_016545 [Theobroma cacao]
           gi|508777876|gb|EOY25132.1| Uncharacterized protein
           TCM_016545 [Theobroma cacao]
          Length = 151

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
 Frame = -1

Query: 421 KQSLMEKGEEMPDNKGGQVEKDGRI-KEEK----EMDSLEKPMASSKRTYKTKPTVPRPF 257
           +  L++  +E  D  G ++  + ++ K EK    ++D  +KP   SK++ KTKPT+P+PF
Sbjct: 38  ENQLLDDKKEEKDRNGEEINVENQVLKSEKVGDSQIDLAQKPKQGSKQSLKTKPTIPQPF 97

Query: 256 SLATDKRMTRERFG 215
           SL+T KRM++++ G
Sbjct: 98  SLSTAKRMSKDKRG 111


Top