BLASTX nr result
ID: Cocculus23_contig00035953
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00035953 (840 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN75156.1| hypothetical protein VITISV_042643 [Vitis vinifera] 50 2e-06 ref|XP_004162147.1| PREDICTED: putative ribonuclease H protein A... 42 3e-06 emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera] 50 9e-06 emb|CAN72548.1| hypothetical protein VITISV_035350 [Vitis vinifera] 50 9e-06 >emb|CAN75156.1| hypothetical protein VITISV_042643 [Vitis vinifera] Length = 721 Score = 49.7 bits (117), Expect(2) = 2e-06 Identities = 28/79 (35%), Positives = 44/79 (55%) Frame = -1 Query: 537 KVPTLRYILAVACINTVNTLQNYGGLSQKVN*HKCSCSPQWCSLCRRDDENFDNLFLHCH 358 KV L +++A +NT + LQ L + +K C PQWC LC+R+ E+ D+LFLHC Sbjct: 561 KVKALAWLVAHGKVNTNDKLQ----LRRP---YKALC-PQWCILCKRNGESIDHLFLHCP 612 Query: 357 FSSYIWAKVYMRSVGCWSP 301 + +W +++ W P Sbjct: 613 VTIGLWHRLFNLVGVIWVP 631 Score = 28.9 bits (63), Expect(2) = 2e-06 Identities = 8/25 (32%), Positives = 15/25 (60%) Frame = -3 Query: 220 LWFIWLDRCQRTIQDTSKTADQVWE 146 +W +W +R R +D +T + VW+ Sbjct: 664 IWMVWQERNNRIFEDKGRTEEVVWD 688 >ref|XP_004162147.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis sativus] Length = 218 Score = 42.4 bits (98), Expect(2) = 3e-06 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = -1 Query: 501 CINTVNTLQNYGGLSQKVN*HKCSCSPQWCSLCRRDDENFDNLFLHCHFSSYIWAKV 331 CINT++ LQ + P WC LC+ +E+ +LF HC +++ +W KV Sbjct: 74 CINTMDMLQR--------RLPTWTIKPSWCILCKAAEEDRQHLFTHCPYTTLLWKKV 122 Score = 36.2 bits (82), Expect(2) = 3e-06 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -3 Query: 292 CMDSYSGRRLK*RQLMSNYEANIALWFIWLDRCQRTIQDTSKTADQVWE 146 C D + + +Q+++ + LW IW +R +R ++ K AD VWE Sbjct: 139 CKDLFKTKGKTQKQIINQHLVAATLWNIWNERNRRIFKEEEKKADSVWE 187 >emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera] Length = 971 Score = 50.1 bits (118), Expect(2) = 9e-06 Identities = 29/79 (36%), Positives = 44/79 (55%) Frame = -1 Query: 537 KVPTLRYILAVACINTVNTLQNYGGLSQKVN*HKCSCSPQWCSLCRRDDENFDNLFLHCH 358 KV L +I+A +NT + LQ L + +K C PQWC LC+ + E+ D+LFLHC Sbjct: 716 KVKALAWIVAHGKVNTNDKLQ----LRRP---YKALC-PQWCILCKANGESIDHLFLHCP 767 Query: 357 FSSYIWAKVYMRSVGCWSP 301 + +W K++ + W P Sbjct: 768 VTIGLWNKLFKMAGLDWVP 786 Score = 26.6 bits (57), Expect(2) = 9e-06 Identities = 6/25 (24%), Positives = 16/25 (64%) Frame = -3 Query: 220 LWFIWLDRCQRTIQDTSKTADQVWE 146 +W +W +R +R +D ++ + +W+ Sbjct: 819 VWIVWQERNKRIFEDKGRSEETLWD 843 >emb|CAN72548.1| hypothetical protein VITISV_035350 [Vitis vinifera] Length = 306 Score = 50.1 bits (118), Expect(2) = 9e-06 Identities = 29/79 (36%), Positives = 44/79 (55%) Frame = -1 Query: 537 KVPTLRYILAVACINTVNTLQNYGGLSQKVN*HKCSCSPQWCSLCRRDDENFDNLFLHCH 358 KV L +I+A +NT + LQ L + +K C PQWC LC+ + E+ D+LFLHC Sbjct: 156 KVKALAWIVAHGKVNTNDKLQ----LRRP---YKALC-PQWCILCKANGESIDHLFLHCP 207 Query: 357 FSSYIWAKVYMRSVGCWSP 301 + +W K++ + W P Sbjct: 208 VTIGLWNKLFKMAGLDWVP 226 Score = 26.6 bits (57), Expect(2) = 9e-06 Identities = 6/25 (24%), Positives = 16/25 (64%) Frame = -3 Query: 220 LWFIWLDRCQRTIQDTSKTADQVWE 146 +W +W +R +R +D ++ + +W+ Sbjct: 259 VWIVWQERNKRIFEDKGRSEETLWD 283