BLASTX nr result
ID: Cocculus23_contig00035950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00035950
(201 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm... 60 3e-07
ref|XP_002300676.1| hypothetical protein POPTR_0002s01710g [Popu... 59 7e-07
ref|XP_006342093.1| PREDICTED: F-box protein SKIP23-like isoform... 58 1e-06
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm... 58 2e-06
ref|XP_004238401.1| PREDICTED: F-box protein SKIP23-like [Solanu... 57 3e-06
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 57 3e-06
ref|XP_006440155.1| hypothetical protein CICLE_v10024484mg [Citr... 56 5e-06
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm... 56 6e-06
ref|XP_007009138.1| Uncharacterized protein TCM_042639 [Theobrom... 55 8e-06
>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
gi|223551310|gb|EEF52796.1| conserved hypothetical
protein [Ricinus communis]
Length = 406
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = -2
Query: 200 RLPWLML---FDNPPKSSNTHVFFSVVDNSTYELKLLEAQGKRCVGSSKGWLIIIDSNLE 30
RLPWL+L DNP N F++ D TY L+L E KRC GSS GWL++++
Sbjct: 49 RLPWLLLPHHKDNP----NHRGFYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPS 104
Query: 29 IRLLNPFTR 3
I LLNP T+
Sbjct: 105 IFLLNPLTK 113
>ref|XP_002300676.1| hypothetical protein POPTR_0002s01710g [Populus trichocarpa]
gi|222842402|gb|EEE79949.1| hypothetical protein
POPTR_0002s01710g [Populus trichocarpa]
Length = 305
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = -2
Query: 200 RLPWLML-FDNPPKSSNTHVFFSVVDNSTYELKLLEAQGKRCVGSSKGWLIIIDSNLEIR 24
+LPWL+L + N S N F+++ D TY L+L EA KRC GSS GWL++++ I
Sbjct: 49 QLPWLLLPYQND--SPNHRGFYNLADGKTYRLELPEAYEKRCCGSSHGWLVMVEETPAIF 106
Query: 23 LLNPFTR 3
LLNP +
Sbjct: 107 LLNPLKK 113
>ref|XP_006342093.1| PREDICTED: F-box protein SKIP23-like isoform X1 [Solanum tuberosum]
gi|565350271|ref|XP_006342094.1| PREDICTED: F-box
protein SKIP23-like isoform X2 [Solanum tuberosum]
Length = 402
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = -2
Query: 200 RLPWLMLFDNPPKSSNTHVFFSVVDNSTYELKLLEAQG--KRCVGSSKGWLIIIDSNLEI 27
+LPWLML P SN FF+ VDN + L L EA +RC GSS GWLII+D + I
Sbjct: 58 QLPWLML---PKNQSNRRGFFNFVDNKVHFLNLPEASNSRRRC-GSSHGWLIIVDESPSI 113
Query: 26 RLLNPFTR 3
++NP T+
Sbjct: 114 FVINPLTK 121
>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
gi|223551309|gb|EEF52795.1| conserved hypothetical
protein [Ricinus communis]
Length = 406
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = -2
Query: 200 RLPWLMLFDNPPKSSNTHVFFSVVDNSTYELKLLEAQGKRCVGSSKGWLIIIDSNLEIRL 21
+LPWL+L + N F+++ D TY L+L E KRC GSS GWL++++ I L
Sbjct: 49 QLPWLLL-PYHKNNPNHRGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFL 107
Query: 20 LNPFTR 3
LNP T+
Sbjct: 108 LNPLTK 113
>ref|XP_004238401.1| PREDICTED: F-box protein SKIP23-like [Solanum lycopersicum]
Length = 402
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = -2
Query: 200 RLPWLMLFDNPPKSSNTHVFFSVVDNSTYELKLLEAQG--KRCVGSSKGWLIIIDSNLEI 27
+LPWLML P +N FF+ VDN + L L EA +RC GSS GWLII+D + I
Sbjct: 58 QLPWLML---PKNQTNRRGFFNFVDNKVHFLNLPEASSSRRRC-GSSHGWLIIVDESPSI 113
Query: 26 RLLNPFTR 3
++NP T+
Sbjct: 114 FVINPLTK 121
>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
Length = 1290
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = -2
Query: 194 PWLMLFDNPPKSSNTHVFFSVVDNSTYELKLLEAQGKRCVGSSKGWLIIIDSNLEIRLLN 15
PWLML + ++S F+S + YE++L E GK C GS GWL+ I ++L++ LLN
Sbjct: 970 PWLMLAEK--ENSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLN 1027
Query: 14 PFTR 3
P TR
Sbjct: 1028 PLTR 1031
>ref|XP_006440155.1| hypothetical protein CICLE_v10024484mg [Citrus clementina]
gi|557542417|gb|ESR53395.1| hypothetical protein
CICLE_v10024484mg [Citrus clementina]
Length = 362
Score = 56.2 bits (134), Expect = 5e-06
Identities = 32/66 (48%), Positives = 41/66 (62%)
Frame = -2
Query: 200 RLPWLMLFDNPPKSSNTHVFFSVVDNSTYELKLLEAQGKRCVGSSKGWLIIIDSNLEIRL 21
R PWLML P K ++ FFS+ T + L EA GK+C SSKGWLI I +L + L
Sbjct: 50 RAPWLMLA--PEKCTDQRRFFSLSKGMTRQFILPEANGKKCF-SSKGWLITIAQDLSMSL 106
Query: 20 LNPFTR 3
L+PF+R
Sbjct: 107 LHPFSR 112
>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
gi|223551313|gb|EEF52799.1| conserved hypothetical
protein [Ricinus communis]
Length = 402
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = -2
Query: 200 RLPWLML--FDNPPKSSNTHVFFSVVDNSTYELKLLEAQGKRCVGSSKGWLIIIDSNLEI 27
+LP+L+L + N P F+++ D+ Y L+L EA KRC GSS GWLI+++ + I
Sbjct: 51 QLPFLLLPYYQNNPDRRG---FYNISDDKIYVLELPEAYEKRCCGSSHGWLIMVEDSPSI 107
Query: 26 RLLNPFTR 3
LLNP TR
Sbjct: 108 FLLNPLTR 115
>ref|XP_007009138.1| Uncharacterized protein TCM_042639 [Theobroma cacao]
gi|508726051|gb|EOY17948.1| Uncharacterized protein
TCM_042639 [Theobroma cacao]
Length = 617
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = -2
Query: 200 RLPWLMLFDNPPKSSNTHVFFSVVDNSTYELKLLEAQGKRCVGSSKGWLIIIDSNLEIRL 21
R P LML D +S+ + F+SV N YEL+L +A GKRC GS GW++ + +L+ L
Sbjct: 265 RFPRLMLCDKENRSTKS--FYSVGRNKIYELELPQAHGKRCHGSPYGWIVTMGPDLQAHL 322
Query: 20 LNPFTR 3
L+P ++
Sbjct: 323 LHPLSQ 328