BLASTX nr result

ID: Cocculus23_contig00035830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00035830
         (213 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37772.1| hypothetical protein MIMGU_mgv1a018949mg, partial...    76   6e-12
ref|XP_006487202.1| PREDICTED: uncharacterized protein LOC102624...    76   6e-12
ref|XP_006423213.1| hypothetical protein CICLE_v10029894mg [Citr...    76   6e-12
emb|CBI32560.3| unnamed protein product [Vitis vinifera]               75   1e-11
ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat...    75   1e-11
ref|XP_007042741.1| Tetratricopeptide repeat-like superfamily pr...    73   4e-11
ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312...    70   2e-10
gb|EPS64718.1| hypothetical protein M569_10061, partial [Genlise...    69   9e-10
ref|XP_007201532.1| hypothetical protein PRUPE_ppa016358mg [Prun...    69   9e-10
ref|XP_002306089.2| hypothetical protein POPTR_0004s15930g [Popu...    68   1e-09
ref|XP_002306087.2| hypothetical protein POPTR_0004s15870g [Popu...    68   1e-09
ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat...    68   1e-09
ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    67   2e-09
ref|XP_002313059.2| hypothetical protein POPTR_0009s11640g [Popu...    66   6e-09
ref|XP_006339684.1| PREDICTED: putative pentatricopeptide repeat...    65   1e-08
ref|XP_004231205.1| PREDICTED: putative pentatricopeptide repeat...    64   2e-08
ref|XP_007131873.1| hypothetical protein PHAVU_011G048400g [Phas...    62   6e-08
ref|XP_004507434.1| PREDICTED: putative pentatricopeptide repeat...    62   8e-08
ref|XP_003539025.2| PREDICTED: putative pentatricopeptide repeat...    61   1e-07
ref|XP_002519085.1| pentatricopeptide repeat-containing protein,...    61   1e-07

>gb|EYU37772.1| hypothetical protein MIMGU_mgv1a018949mg, partial [Mimulus
           guttatus]
          Length = 631

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQDTH--- 41
           I+ ++I +R+ S AR +FD++P KDSVTYNSMIAGYA + G E +A EL  +MQ  +   
Sbjct: 19  ILNTYIKSRNFSRARIIFDSSPCKDSVTYNSMIAGYARSDGYEHEAIELFNQMQFDNNGI 78

Query: 40  IPIDEFTLTTLLN 2
             IDEFTLTT+LN
Sbjct: 79  ARIDEFTLTTMLN 91


>ref|XP_006487202.1| PREDICTED: uncharacterized protein LOC102624533 [Citrus sinensis]
          Length = 1133

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQ--DTHI 38
           II + I + DL+ ARSLFD++P KD VTYNSM+ G+ N  G E+ A +L  EMQ  D HI
Sbjct: 504 IISACIKSHDLTQARSLFDSSPHKDLVTYNSMLCGFINGDGYEADALKLFIEMQSADEHI 563

Query: 37  PIDEFTLTTLLN 2
            +DEFT+T+ LN
Sbjct: 564 RMDEFTVTSTLN 575


>ref|XP_006423213.1| hypothetical protein CICLE_v10029894mg [Citrus clementina]
           gi|557525147|gb|ESR36453.1| hypothetical protein
           CICLE_v10029894mg [Citrus clementina]
          Length = 676

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQ--DTHI 38
           II + I + DL+ ARSLFD++P KD VTYNSM+ G+ N  G E+ A +L  EMQ  D HI
Sbjct: 62  IISACIKSHDLTQARSLFDSSPHKDLVTYNSMLCGFINGDGYEADALKLFIEMQSADEHI 121

Query: 37  PIDEFTLTTLLN 2
            +DEFT+T+ LN
Sbjct: 122 RMDEFTVTSTLN 133


>emb|CBI32560.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQ--DTHI 38
           II+++I  ++L  AR LFD+APSKD VTYNSM++GY N  G E+ A +L  EMQ  +   
Sbjct: 60  IIWAYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDET 119

Query: 37  PIDEFTLTTLLN 2
            IDEF+LT +LN
Sbjct: 120 RIDEFSLTRMLN 131


>ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Vitis vinifera]
          Length = 670

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQ--DTHI 38
           II+++I  ++L  AR LFD+APSKD VTYNSM++GY N  G E+ A +L  EMQ  +   
Sbjct: 60  IIWAYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDET 119

Query: 37  PIDEFTLTTLLN 2
            IDEF+LT +LN
Sbjct: 120 RIDEFSLTRMLN 131


>ref|XP_007042741.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
           gi|508706676|gb|EOX98572.1| Tetratricopeptide
           repeat-like superfamily protein [Theobroma cacao]
          Length = 1158

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 38/73 (52%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQ---DTH 41
           II ++I +++L+ AR+LFD AP KD VTYNSM++GY +A G E+ A +L  +MQ   D  
Sbjct: 449 IISAYIKSQNLTQARALFDDAPHKDLVTYNSMLSGYVSADGSETHAVKLFYDMQAACDDK 508

Query: 40  IPIDEFTLTTLLN 2
           I IDEFT+TT+L+
Sbjct: 509 IKIDEFTVTTMLS 521


>ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312896 [Fragaria vesca
            subsp. vesca]
          Length = 2277

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211  IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEM--QDTHI 38
            II +HI + +L  AR LFDAAP KD VTYNSM++GY +  G E+ A  L  EM  +D  +
Sbjct: 1652 IISTHIKSHNLDRARRLFDAAPYKDLVTYNSMLSGYTSTDGYEACAVGLFREMRLRDDCV 1711

Query: 37   PIDEFTLTTLLN 2
             +DE TLTT+LN
Sbjct: 1712 GVDEVTLTTMLN 1723


>gb|EPS64718.1| hypothetical protein M569_10061, partial [Genlisea aurea]
          Length = 642

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 34/65 (52%), Positives = 47/65 (72%)
 Frame = -3

Query: 196 INNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQDTHIPIDEFTL 17
           I  RDLS A+++FD+ P KDS+TYNS+++GYA   G E++A  L  +M   +  IDEFTL
Sbjct: 55  IRCRDLSKAKAIFDSCPCKDSITYNSLLSGYARTDGYEAEATALFTKMV-RNADIDEFTL 113

Query: 16  TTLLN 2
           TT+LN
Sbjct: 114 TTMLN 118


>ref|XP_007201532.1| hypothetical protein PRUPE_ppa016358mg [Prunus persica]
           gi|462396932|gb|EMJ02731.1| hypothetical protein
           PRUPE_ppa016358mg [Prunus persica]
          Length = 629

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQ--DTHI 38
           II SHI  ++L  AR LFD+A  KD VTYNS+++GY +  G E  A EL  EM   D  I
Sbjct: 19  IISSHIKAQNLKRARQLFDSASYKDLVTYNSLLSGYVSTDGYEDCALELFSEMNSLDYGI 78

Query: 37  PIDEFTLTTLLN 2
            IDE +LTT+LN
Sbjct: 79  RIDEISLTTMLN 90


>ref|XP_002306089.2| hypothetical protein POPTR_0004s15930g [Populus trichocarpa]
           gi|550341127|gb|EEE86600.2| hypothetical protein
           POPTR_0004s15930g [Populus trichocarpa]
          Length = 677

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQD--THI 38
           II +HI +++L+ A+S+FD+A  +D VTYNSM++GY +  G E  A EL  EMQ     I
Sbjct: 60  IISAHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSIRNEI 119

Query: 37  PIDEFTLTTLLN 2
            ID+ T+T+++N
Sbjct: 120 EIDDLTITSMVN 131


>ref|XP_002306087.2| hypothetical protein POPTR_0004s15870g [Populus trichocarpa]
           gi|550341121|gb|EEE86598.2| hypothetical protein
           POPTR_0004s15870g [Populus trichocarpa]
          Length = 677

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQD--THI 38
           II +HI +++L+ A+S+FD+A  +D VTYNSM++GY +  G E  A EL  EMQ     I
Sbjct: 60  IISAHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSKRNEI 119

Query: 37  PIDEFTLTTLLN 2
            ID+ T+T+++N
Sbjct: 120 EIDDLTITSMVN 131


>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Cucumis sativus]
          Length = 1096

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQDT--HI 38
           II +++ +++L  AR+LFD+A  KD VTYNSM++GYA + G + QA     EMQ     I
Sbjct: 483 IIAAYVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMI 542

Query: 37  PIDEFTLTTLLN 2
            IDEFTL T+LN
Sbjct: 543 RIDEFTLITMLN 554


>ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g18840-like [Cucumis
           sativus]
          Length = 1096

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQDT--HI 38
           II +++ + +L  AR+LFD+A  KD VTYNSM++GYA + G + QA     EMQ     I
Sbjct: 483 IIAAYVKSHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMI 542

Query: 37  PIDEFTLTTLLN 2
            IDEFTL T+LN
Sbjct: 543 RIDEFTLITMLN 554


>ref|XP_002313059.2| hypothetical protein POPTR_0009s11640g [Populus trichocarpa]
           gi|550331529|gb|EEE87014.2| hypothetical protein
           POPTR_0009s11640g [Populus trichocarpa]
          Length = 677

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 31/71 (43%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEM--QDTHI 38
           II +H+ +++L+ A+S+FD+A  +D VTYNSM++GYA+  G E  A EL  EM  +   I
Sbjct: 60  IISAHVKSQNLAQAKSIFDSASVRDLVTYNSMLSGYADVDGYERNALELFVEMHSKSNDI 119

Query: 37  PIDEFTLTTLL 5
            +D+FT+T+++
Sbjct: 120 GVDDFTVTSMV 130


>ref|XP_006339684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Solanum tuberosum]
          Length = 631

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/69 (44%), Positives = 48/69 (69%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQDTHIPI 32
           II +++ +++ + AR+LF+AAP KD VTYN+M++GY N+ G + QA  L  EMQ     +
Sbjct: 12  IINTYVKDQNFAKARTLFNAAPLKDCVTYNTMLSGYVNSEGFQDQAVRLFAEMQFAD-KV 70

Query: 31  DEFTLTTLL 5
            E+ LTT+L
Sbjct: 71  SEYALTTML 79


>ref|XP_004231205.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Solanum lycopersicum]
          Length = 753

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/69 (43%), Positives = 48/69 (69%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQDTHIPI 32
           II +++ +++ + AR+LF+AAP KD VTYN+M++GY N+ G + +A  L  EMQ     +
Sbjct: 60  IINTYVKDQNFAKARTLFNAAPLKDCVTYNTMLSGYVNSEGFQDEAVRLFAEMQFAD-KV 118

Query: 31  DEFTLTTLL 5
            E+ LTT+L
Sbjct: 119 SEYALTTML 127


>ref|XP_007131873.1| hypothetical protein PHAVU_011G048400g [Phaseolus vulgaris]
           gi|561004873|gb|ESW03867.1| hypothetical protein
           PHAVU_011G048400g [Phaseolus vulgaris]
          Length = 691

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQDTH--I 38
           II ++I   +L+ A++LFD+A  +D V+YNSM++ Y    G E++A +    MQ     I
Sbjct: 66  IIMAYIKAHNLTHAQALFDSASHRDLVSYNSMLSAYVGLEGYETEALDFFTRMQSARDTI 125

Query: 37  PIDEFTLTTLLN 2
            IDEFTLTT+LN
Sbjct: 126 GIDEFTLTTMLN 137


>ref|XP_004507434.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Cicer arietinum]
          Length = 688

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQDTH--I 38
           +I ++I   +L+ AR LFD+A   D V+YN+M++ Y  A G E++A +L   MQ     I
Sbjct: 64  LIMAYIKAHNLTRARVLFDSASHIDVVSYNTMLSAYVGADGYETEALDLFARMQSARDTI 123

Query: 37  PIDEFTLTTLLN 2
            ID+FTLTT+LN
Sbjct: 124 GIDDFTLTTMLN 135


>ref|XP_003539025.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Glycine max]
          Length = 692

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEMQDTH--I 38
           II ++I   +L+ AR+LFD+A  +D V+YNS+++ Y  + G E++A +L   MQ     I
Sbjct: 66  IIMAYIKAHNLTQARALFDSASHRDLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTI 125

Query: 37  PIDEFTLTTLLN 2
            IDE TLT +LN
Sbjct: 126 GIDEITLTNMLN 137


>ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541748|gb|EEF43296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1157

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
 Frame = -3

Query: 211 IIYSHINNRDLSLARSLFDAAPSKDSVTYNSMIAGYANAPGLESQAFELLCEM--QDTHI 38
           II +HI   +L+ A+++FD+A  +D VTYN M++GY    G ES A +L  EM    + +
Sbjct: 534 IISAHIRTHNLTQAKAIFDSASVRDLVTYNLMLSGYVRVDGCESYALDLFKEMPRNRSKV 593

Query: 37  PIDEFTLTTLL 5
            IDEF+LTT++
Sbjct: 594 GIDEFSLTTMV 604


Top