BLASTX nr result
ID: Cocculus23_contig00035724
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00035724
(363 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 76 4e-12
ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629... 75 7e-12
ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein A... 74 2e-11
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623... 74 3e-11
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 74 3e-11
ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] g... 74 3e-11
ref|XP_007224752.1| hypothetical protein PRUPE_ppa024202mg [Prun... 72 6e-11
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612... 72 8e-11
ref|XP_006488995.1| PREDICTED: putative ribonuclease H protein A... 72 8e-11
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A... 70 2e-10
ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608... 69 5e-10
ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein A... 69 7e-10
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 68 1e-09
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 68 1e-09
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 68 2e-09
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 67 2e-09
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 67 2e-09
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 67 2e-09
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 67 3e-09
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ... 67 3e-09
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/83 (40%), Positives = 48/83 (57%)
Frame = +3
Query: 51 KSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHARV 230
K+ W +W+L +P K+RIF+W+ LP++ NLWKRKIV P C +C G+E+V HA V
Sbjct: 806 KNEWNIIWSLALPKKIRIFVWRAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALV 865
Query: 231 KCSRASAALETWMTKLSIQERAG 299
C A + + IQ G
Sbjct: 866 DCKAAKKVWRLSLFYIDIQAAPG 888
>ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629438 [Citrus sinensis]
Length = 715
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = +3
Query: 51 KSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHARV 230
K+ W +W+L +P K+RIF+W+ LP+ NLWKRKIV P C +C G+E+V HA V
Sbjct: 417 KNEWNIIWSLALPKKIRIFVWRAAKNLLPSDENLWKRKIVQEPTCQLCKMGIENVFHALV 476
Query: 231 KCSRASAALETWMTKLSIQERAGLLQGDFRGLIG--ILSLM 347
C AA + W R L D + G ILSL+
Sbjct: 477 DC---KAAKKVW--------RLSLFDNDIQAAPGQDILSLL 506
>ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 473
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +3
Query: 51 KSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHARV 230
KS W +W+ +P KV+IFMW+ LPT++NLWK+K+V SP+C C ED HA +
Sbjct: 193 KSQWKVIWSTEIPEKVKIFMWRAAKNLLPTANNLWKKKVVPSPICQRCFCKSEDPCHALL 252
Query: 231 KCSRASAALETW 266
C AA +TW
Sbjct: 253 DC---KAARKTW 261
>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
Length = 441
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/92 (39%), Positives = 51/92 (55%)
Frame = +3
Query: 54 SFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHARVK 233
S W +W +P K++IFMW+ + LPT+SNLW+RKIV SP+C C EDV HA +
Sbjct: 120 SQWNVIWAAELPEKIKIFMWRAVKNLLPTTSNLWRRKIVGSPICRRCGVKNEDVIHALLD 179
Query: 234 CSRASAALETWMTKLSIQERAGLLQGDFRGLI 329
C A + W +E L+Q D ++
Sbjct: 180 C---KVAKKVWRNAGCAEEIEKLVQQDLMAVL 208
>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
Length = 1238
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/92 (39%), Positives = 51/92 (55%)
Frame = +3
Query: 54 SFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHARVK 233
S W +W +P K++IFMW+ + LPT+SNLW+RKIV SP+C C EDV HA +
Sbjct: 917 SQWNVIWAAELPEKIKIFMWRAVKNLLPTASNLWRRKIVGSPICRRCGVKNEDVIHALLD 976
Query: 234 CSRASAALETWMTKLSIQERAGLLQGDFRGLI 329
C A + W +E L+Q D ++
Sbjct: 977 C---KVAKKVWRNAGCAEEIEKLVQQDLMAVL 1005
>ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] gi|77548275|gb|ABA91072.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group] gi|255679693|dbj|BAH95030.1|
Os11g0106066 [Oryza sativa Japonica Group]
Length = 1690
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +3
Query: 21 GNSGAINMHPKSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHD 200
G+S + +H + W +W +P K++IF WKV L T N KRK+V+S +C++C+
Sbjct: 1516 GSSSSFALHSRKSWDLIWKCKLPQKIKIFAWKVASNCLATMDNKRKRKLVNSDICIICNR 1575
Query: 201 GLEDVPHARVKCSRASAAL 257
+E+ HA KC RASA L
Sbjct: 1576 EVENSVHALFKCPRASALL 1594
>ref|XP_007224752.1| hypothetical protein PRUPE_ppa024202mg [Prunus persica]
gi|462421688|gb|EMJ25951.1| hypothetical protein
PRUPE_ppa024202mg [Prunus persica]
Length = 1106
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/87 (34%), Positives = 50/87 (57%)
Frame = +3
Query: 6 LDQSIGNSGAINMHPKSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLC 185
+D G GA + + + W++LW + V KV++F+W+ +H+ LP +NL ++++ +P+C
Sbjct: 982 IDHKDGEVGASSNNLDNIWLRLWRMQVATKVKVFLWRCMHEILPCRANLSLKRVISNPIC 1041
Query: 186 LVCHDGLEDVPHARVKCSRASAALETW 266
CH E V HA C AA E W
Sbjct: 1042 FWCHQASEIVLHALWDC---PAAREVW 1065
>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
Length = 589
Score = 72.0 bits (175), Expect = 8e-11
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 60 WIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHARVKC 236
W +W LN+P K++IF+WK LP + NLW+RK++ P C +C G EDV HA ++C
Sbjct: 271 WQHIWRLNLPEKIKIFVWKATKNLLPMAENLWRRKVLKEPTCHLCKAGCEDVFHALMEC 329
>ref|XP_006488995.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 434
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/103 (37%), Positives = 56/103 (54%)
Frame = +3
Query: 51 KSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHARV 230
KS W W+ +P KV+IFMW+ + LPT+SNLWKRKIV +C+ C EDV HA +
Sbjct: 195 KSRWDVFWSNELPKKVKIFMWRAVKNLLPTASNLWKRKIVVELVCVRCGCRREDVAHALL 254
Query: 231 KCSRASAALETWMTKLSIQERAGLLQGDFRGLIGILSLMIMEE 359
+C AA W ++ + Q D +I ++L +E
Sbjct: 255 EC---KAARRVWKKTELYKDIKMMAQQDILSMIQEVALKRSKE 294
>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 494
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/84 (38%), Positives = 44/84 (52%)
Frame = +3
Query: 39 NMHPKSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVP 218
N S W +W L +PAK++IF+W+ LPT+ NLWKRKIV C C + +E+
Sbjct: 201 NSSSSSNWSVIWKLTLPAKIKIFIWRAAKNLLPTAENLWKRKIVHEAYCKRCGNRVENTL 260
Query: 219 HARVKCSRASAALETWMTKLSIQE 290
HA + C A + S QE
Sbjct: 261 HALITCKAAKKVWQLSPMASSFQE 284
>ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis]
Length = 1570
Score = 69.3 bits (168), Expect = 5e-10
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +3
Query: 60 WIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHARVKC 236
W +W L +P K+RIF W+ LP++ NLWKRK++ PLC C+ LE + HA V C
Sbjct: 953 WNAIWLLTLPEKIRIFAWRAAKNLLPSAENLWKRKVIQEPLCQFCNKKLETIFHALVGC 1011
>ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis] gi|568879016|ref|XP_006492479.1|
PREDICTED: putative ribonuclease H protein
At1g65750-like isoform X2 [Citrus sinensis]
Length = 320
Score = 68.9 bits (167), Expect = 7e-10
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +3
Query: 60 WIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHA 224
W +W L P KV+IF+W+ LPT NLWKRK+V P+C +C LE++ HA
Sbjct: 52 WQTIWKLGNPEKVKIFLWRTTKNLLPTMENLWKRKVVQEPICQICKKELENISHA 106
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +3
Query: 6 LDQSIGNSGAINMHPKSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLC 185
L+Q+ N + W W L++P KV+IFMW+ L LPT+ NLWKR+ + P+C
Sbjct: 1115 LNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPIC 1174
Query: 186 LVCHDGLEDVPHARVKCSRA 245
C +E V H ++C A
Sbjct: 1175 QRCKLQVETVSHVLIECKAA 1194
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +3
Query: 6 LDQSIGNSGAINMHPKSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLC 185
L+Q+ N + W W L++P KV+IFMW+ L LPT+ NLWKR+ + P+C
Sbjct: 428 LNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPIC 487
Query: 186 LVCHDGLEDVPHARVKCSRA 245
C +E V H ++C A
Sbjct: 488 QRCKLQVETVSHVLIECKAA 507
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 67.8 bits (164), Expect = 2e-09
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +3
Query: 60 WIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHARVKCS 239
W +W++ +P K++IFMW+ LPT+ NLWKRK + P+C C+ +E V HA + C
Sbjct: 1016 WKAVWSMELPEKMKIFMWRAARNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCK 1075
Query: 240 RA 245
A
Sbjct: 1076 AA 1077
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 765
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +3
Query: 6 LDQSIGNSGAINMHPKSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLC 185
L N + + + W +W L +P KV+IFMW+ + LPTS NLWKR+I+ +P C
Sbjct: 432 LQMKFPNRPSSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWC 491
Query: 186 LVCHDGLEDVPHARVKC 236
C E + H+ C
Sbjct: 492 QRCRSHRETIFHSLFDC 508
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +3
Query: 6 LDQSIGNSGAINMHPKSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLC 185
L N + + + W +W L +P KV+IFMW+ + LPTS NLWKR+I+ +P C
Sbjct: 635 LQMKFPNRPSSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWC 694
Query: 186 LVCHDGLEDVPHARVKC 236
C E + H+ C
Sbjct: 695 QRCRSHRETIFHSLFDC 711
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +3
Query: 6 LDQSIGNSGAINMHPKSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLC 185
L N + + + W +W L +P KV+IFMW+ + LPTS NLWKR+I+ +P C
Sbjct: 432 LQMKFPNRPSSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWC 491
Query: 186 LVCHDGLEDVPHARVKC 236
C E + H+ C
Sbjct: 492 QRCRSHRETIFHSLFDC 508
>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
Length = 440
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = +3
Query: 36 INMHPKSFWIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDV 215
+++ S W +LW L VP+KV+ FMW+ L LPT+ NL K+ + P C+ CH E +
Sbjct: 115 LDIPSSSIWNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESI 174
Query: 216 PHARVKCSRASAALETWMT 272
H ++C A WMT
Sbjct: 175 CHILLQCPFARTC---WMT 190
>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1378
Score = 67.0 bits (162), Expect = 3e-09
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +3
Query: 60 WIKLWNLNVPAKVRIFMWKVLHQFLPTSSNLWKRKIVDSPLCLVCHDGLEDVPHARVKCS 239
W +LWNL VPAK++IF W+ L +P + L R + DS C VC +G ED+ H C+
Sbjct: 507 WKRLWNLKVPAKIKIFGWRALKGLVPCRAILANRHVGDSGGCPVCQNGPEDIKHMIFTCA 566
Query: 240 RA-----SAALETWMTKLSIQERAG 299
RA S +E + +L + ER+G
Sbjct: 567 RAKQVWNSLGVEDRIQRLCMTERSG 591