BLASTX nr result
ID: Cocculus23_contig00035589
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00035589
(552 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS72962.1| hypothetical protein M569_01793, partial [Genlise... 75 1e-11
ref|NP_862323.1| hypothetical protein BrnaMpl_p1 [Brassica napus... 75 1e-11
ref|NP_064072.1| orf192 gene product (mitochondrion) [Beta vulga... 74 3e-11
gb|AAS15054.1| DNA-directed DNA polymerase [Daucus carota] 70 3e-10
ref|YP_004222300.1| hypothetical protein BevumaM_p062 [Beta vulg... 69 8e-10
ref|NP_064017.1| orf310 gene product (mitochondrion) [Beta vulga... 69 8e-10
emb|CBL54116.1| hypothetical protein (mitochondrion) [Beta vulga... 69 8e-10
emb|CBJ20682.1| hypothetical protein [Beta vulgaris subsp. marit... 69 8e-10
dbj|BAD66818.1| orf774 [Beta vulgaris subsp. vulgaris] gi|320148... 69 8e-10
ref|NP_064087.1| orf290 gene product (mitochondrion) [Beta vulga... 69 1e-09
emb|CBJ20750.1| hypothetical protein [Beta vulgaris subsp. marit... 69 1e-09
ref|YP_004222326.1| hypothetical protein BevumaM_p091 [Beta vulg... 69 1e-09
emb|CBJ14059.1| hypothetical protein [Beta vulgaris subsp. marit... 69 1e-09
emb|CBJ14058.1| hypothetical protein [Beta vulgaris subsp. marit... 69 1e-09
dbj|BAD66793.1| orf496 [Beta vulgaris subsp. vulgaris] 69 1e-09
ref|NP_064103.1| orf135 gene product (mitochondrion) [Beta vulga... 64 2e-08
gb|AFI44305.1| DNA polymerase (mitochondrion) [Silene vulgaris] 62 7e-08
dbj|BAD66817.1| orf284 [Beta vulgaris subsp. vulgaris] 59 6e-07
gb|AFD29780.1| DNA polymerase (mitochondrion) [Silene vulgaris] 58 1e-06
emb|CAQ52962.1| unnamed protein product [Lolium perenne] 58 1e-06
>gb|EPS72962.1| hypothetical protein M569_01793, partial [Genlisea aurea]
Length = 624
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
K+N S + L+ +YYIV+YV+N D +W P MS V L AIT +RIH Y YI R
Sbjct: 428 KENFQSAEMLNENYYIVNYVTNC-FIDDEEWKAPKMSAVHLAAAITACSRIHMYPYICRE 486
Query: 266 DCYQTTTNSAILGSP 222
DCY T T+S ILG+P
Sbjct: 487 DCYYTDTDSVILGNP 501
>ref|NP_862323.1| hypothetical protein BrnaMpl_p1 [Brassica napus]
gi|23200580|dbj|BAC16364.1| orf5 [Brassica napus]
Length = 990
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = -2
Query: 419 LSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRNDCYQTTTNS 240
L YY+V Y NT + D WNPP S VQL AIT ARI+ YKYISR+DCY T T+S
Sbjct: 730 LEDSYYLVRYYINTELSDDSKWNPPRNSAVQLSAAITAYARIYMYKYISRSDCYYTDTDS 789
Query: 239 AILGSPFPDPAV 204
+L PD +
Sbjct: 790 VVLQDSLPDEMI 801
>ref|NP_064072.1| orf192 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435092|ref|YP_004222310.1| hypothetical protein
BevumaM_p075 [Beta vulgaris subsp. maritima]
gi|346683184|ref|YP_004842116.1| hypothetical protein
BemaM_p071 [Beta macrocarpa] gi|9087321|dbj|BAA99465.1|
orf192 [Beta vulgaris subsp. vulgaris]
gi|319439825|emb|CBJ17537.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500102|emb|CBX24920.1|
hypothetical protein [Beta macrocarpa]
gi|384939153|emb|CBL52000.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 192
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
+++ L D L Y++SY +N G +D W+PP S +Q+ AIT + I+ Y YISR+
Sbjct: 3 QESWLDGDYLGNDKYVLSYYTNMGDTIDR-WDPPKNSAIQIAAAITACSSIYMYPYISRD 61
Query: 266 DCYQTTTNSAILGSPFPDPAV 204
DCY T T+S +LG P P+ V
Sbjct: 62 DCYYTDTDSVVLGKPLPEEVV 82
>gb|AAS15054.1| DNA-directed DNA polymerase [Daucus carota]
Length = 774
Score = 70.1 bits (170), Expect = 3e-10
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = -2
Query: 455 VV*KDNLLSRDKLSGHYYIVSYVSNTGHAVDLD-WNPPIMSIVQLLIAITTSARIHTYKY 279
+V KD ++ DKL Y +YV+N + D W+PP + VQL AIT ARIH Y Y
Sbjct: 445 LVRKDTFINGDKL----YEDTYVANLKKDLSTDSWDPPKNAAVQLAAAITACARIHMYPY 500
Query: 278 ISRNDCYQTTTNSAILGSPFPDPAV 204
I+R DCY T T+S +LG+P D V
Sbjct: 501 IAREDCYYTDTDSIVLGNPLSDDMV 525
>ref|YP_004222300.1| hypothetical protein BevumaM_p062 [Beta vulgaris subsp. maritima]
gi|323435136|ref|YP_004222354.1| hypothetical protein
BevumaM_p121 [Beta vulgaris subsp. maritima]
gi|346683173|ref|YP_004842105.1| hypothetical protein
BemaM_p058 [Beta macrocarpa]
gi|346683227|ref|YP_004842159.1| hypothetical protein
BemaM_p115 [Beta macrocarpa] gi|1143422|emb|CAA84068.1|
dpo-r [Beta vulgaris subsp. vulgaris]
gi|317905635|emb|CBJ14035.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439815|emb|CBJ17526.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|319439869|emb|CBJ17574.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500091|emb|CBX24907.1|
hypothetical protein [Beta macrocarpa]
gi|345500145|emb|CBX24964.1| hypothetical protein [Beta
macrocarpa]
Length = 774
Score = 68.9 bits (167), Expect = 8e-10
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
+++ L D L Y++SY +N + +D W+PP S +QL AIT ARI+ YKY SR
Sbjct: 503 QESWLDGDYLGNDKYVLSYHTNMDNTIDR-WDPPKNSAIQLAAAITACARIYMYKYTSRE 561
Query: 266 DCYQTTTNSAILGSPFPDPAV 204
DCY T+S +LG+P P+ V
Sbjct: 562 DCYY--TDSVVLGNPLPEEVV 580
>ref|NP_064017.1| orf310 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|9838501|ref|NP_064113.1| orf310 gene product
(mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435083|ref|YP_004222301.1| hypothetical protein
BevumaM_p063 [Beta vulgaris subsp. maritima]
gi|323435137|ref|YP_004222355.1| hypothetical protein
BevumaM_p122 [Beta vulgaris subsp. maritima]
gi|346683174|ref|YP_004842106.1| hypothetical protein
BemaM_p059 [Beta macrocarpa]
gi|346683228|ref|YP_004842160.1| hypothetical protein
BemaM_p116 [Beta macrocarpa] gi|9049318|dbj|BAA99328.1|
orf310 [Beta vulgaris subsp. vulgaris]
gi|9087363|dbj|BAA99507.1| orf310 [Beta vulgaris subsp.
vulgaris] gi|317905587|emb|CBJ13999.1| hypothetical
protein [Beta vulgaris subsp. maritima]
gi|317905636|emb|CBJ14036.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439816|emb|CBJ17527.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|319439870|emb|CBJ17575.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500092|emb|CBX24908.1|
hypothetical protein [Beta macrocarpa]
gi|345500146|emb|CBX24965.1| hypothetical protein [Beta
macrocarpa] gi|384977895|emb|CBL54117.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 310
Score = 68.9 bits (167), Expect = 8e-10
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
+++ L D L Y++SY +N + +D W+PP S +QL AIT ARI+ YKY SR
Sbjct: 39 QESWLDGDYLGNDKYVLSYHTNMDNTIDR-WDPPKNSAIQLAAAITACARIYMYKYTSRE 97
Query: 266 DCYQTTTNSAILGSPFPDPAV 204
DCY T+S +LG+P P+ V
Sbjct: 98 DCYY--TDSVVLGNPLPEEVV 116
>emb|CBL54116.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
maritima]
Length = 774
Score = 68.9 bits (167), Expect = 8e-10
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
+++ L D L Y++SY +N + +D W+PP S +QL AIT ARI+ YKY SR
Sbjct: 503 QESWLDGDYLGNDKYVLSYHTNMDNTIDR-WDPPKNSAIQLAAAITACARIYMYKYTSRE 561
Query: 266 DCYQTTTNSAILGSPFPDPAV 204
DCY T+S +LG+P P+ V
Sbjct: 562 DCYY--TDSVVLGNPLPEEVV 580
>emb|CBJ20682.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 310
Score = 68.9 bits (167), Expect = 8e-10
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
+++ L D L Y++SY +N + +D W+PP S +QL AIT ARI+ YKY SR
Sbjct: 39 QESWLDGDYLGNDKYVLSYHTNMDNTIDR-WDPPKNSAIQLAAAITACARIYMYKYTSRE 97
Query: 266 DCYQTTTNSAILGSPFPDPAV 204
DCY T+S +LG+P P+ V
Sbjct: 98 DCYY--TDSVVLGNPLPEEVV 116
>dbj|BAD66818.1| orf774 [Beta vulgaris subsp. vulgaris] gi|320148017|emb|CBJ20683.1|
hypothetical protein [Beta vulgaris subsp. maritima]
Length = 774
Score = 68.9 bits (167), Expect = 8e-10
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
+++ L D L Y++SY +N + +D W+PP S +QL AIT ARI+ YKY SR
Sbjct: 503 QESWLDGDYLGNDKYVLSYHTNMDNTIDR-WDPPKNSAIQLAAAITACARIYMYKYTSRE 561
Query: 266 DCYQTTTNSAILGSPFPDPAV 204
DCY T+S +LG+P P+ V
Sbjct: 562 DCYY--TDSVVLGNPLPEEVV 580
>ref|NP_064087.1| orf290 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435109|ref|YP_004222327.1| hypothetical protein
BevumaM_p092 [Beta vulgaris subsp. maritima]
gi|346683201|ref|YP_004842133.1| hypothetical protein
BemaM_p088 [Beta macrocarpa] gi|9087336|dbj|BAA99480.1|
orf290 [Beta vulgaris subsp. vulgaris]
gi|319439842|emb|CBJ17550.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500119|emb|CBX24937.1|
hypothetical protein [Beta macrocarpa]
gi|384939135|emb|CBL51982.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 290
Score = 68.6 bits (166), Expect = 1e-09
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
KD+ + KL + +++ Y +N D W+PP S V L AIT SARI+ Y +ISR
Sbjct: 3 KDSFIDGHKLKENNWVLWYHNNMEEGEDR-WDPPQNSAVYLAAAITASARIYMYPFISRE 61
Query: 266 DCYQTTTNSAILGSPFP 216
DCY T T+S +LGSP P
Sbjct: 62 DCYYTDTDSVVLGSPLP 78
>emb|CBJ20750.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 435
Score = 68.6 bits (166), Expect = 1e-09
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
KD+ + KL + +++ Y +N D W+PP S V L AIT SARI+ Y +ISR
Sbjct: 209 KDSFIDGHKLKENNWVLWYHNNMEEGEDR-WDPPQNSAVYLAAAITASARIYMYPFISRE 267
Query: 266 DCYQTTTNSAILGSPFP 216
DCY T T+S +LGSP P
Sbjct: 268 DCYYTDTDSVVLGSPLP 284
>ref|YP_004222326.1| hypothetical protein BevumaM_p091 [Beta vulgaris subsp. maritima]
gi|319439841|emb|CBJ17549.1| hypothetical protein [Beta
vulgaris subsp. maritima]
Length = 496
Score = 68.6 bits (166), Expect = 1e-09
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
KD+ + KL + +++ Y +N D W+PP S V L AIT SARI+ Y +ISR
Sbjct: 209 KDSFIDGHKLKENNWVLWYHNNMEEGEDR-WDPPQNSAVYLAAAITASARIYMYPFISRE 267
Query: 266 DCYQTTTNSAILGSPFP 216
DCY T T+S +LGSP P
Sbjct: 268 DCYYTDTDSVVLGSPLP 284
>emb|CBJ14059.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 290
Score = 68.6 bits (166), Expect = 1e-09
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
KD+ + KL + +++ Y +N D W+PP S V L AIT SARI+ Y +ISR
Sbjct: 3 KDSFIDGHKLKENNWVLWYHNNMEEGEDR-WDPPQNSAVYLAAAITASARIYMYPFISRE 61
Query: 266 DCYQTTTNSAILGSPFP 216
DCY T T+S +LGSP P
Sbjct: 62 DCYYTDTDSVVLGSPLP 78
>emb|CBJ14058.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 496
Score = 68.6 bits (166), Expect = 1e-09
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
KD+ + KL + +++ Y +N D W+PP S V L AIT SARI+ Y +ISR
Sbjct: 209 KDSFIDGHKLKENNWVLWYHNNMEEGEDR-WDPPQNSAVYLAAAITASARIYMYPFISRE 267
Query: 266 DCYQTTTNSAILGSPFP 216
DCY T T+S +LGSP P
Sbjct: 268 DCYYTDTDSVVLGSPLP 284
>dbj|BAD66793.1| orf496 [Beta vulgaris subsp. vulgaris]
Length = 496
Score = 68.6 bits (166), Expect = 1e-09
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRN 267
KD+ + KL + +++ Y +N D W+PP S V L AIT SARI+ Y +ISR
Sbjct: 209 KDSFIDGHKLKENNWVLWYHNNMEEGEDR-WDPPQNSAVYLAAAITASARIYMYPFISRE 267
Query: 266 DCYQTTTNSAILGSPFP 216
DCY T T+S +LGSP P
Sbjct: 268 DCYYTDTDSVVLGSPLP 284
>ref|NP_064103.1| orf135 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435127|ref|YP_004222345.1| hypothetical protein
BevumaM_p111 [Beta vulgaris subsp. maritima]
gi|346683218|ref|YP_004842150.1| hypothetical protein
BemaM_p106 [Beta macrocarpa] gi|9087353|dbj|BAA99497.1|
orf135 [Beta vulgaris subsp. vulgaris]
gi|54606688|dbj|BAD66711.1| orf135 [Beta vulgaris subsp.
vulgaris] gi|317905681|emb|CBJ14075.1| hypothetical
protein [Beta vulgaris subsp. maritima]
gi|319439860|emb|CBJ17565.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|320148052|emb|CBJ20715.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|345500136|emb|CBX24955.1| hypothetical protein [Beta
macrocarpa] gi|384939117|emb|CBL51963.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 135
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/69 (50%), Positives = 42/69 (60%)
Frame = -2
Query: 353 NPPIMSIVQLLIAITTSARIHTYKYISRNDCYQTTTNSAILGSPFPDPAVHLFWELKSLP 174
NPP S VQL AIT ARIH YKYISR+DCY T T+S +L +P P+ V EL
Sbjct: 11 NPPKNSAVQLSTAITACARIHMYKYISRDDCYYTDTDSIVLSNPLPEDDVSSS-ELGKFK 69
Query: 173 FKD*ISKAR 147
+D I K +
Sbjct: 70 LEDQIKKEK 78
>gb|AFI44305.1| DNA polymerase (mitochondrion) [Silene vulgaris]
Length = 994
Score = 62.4 bits (150), Expect = 7e-08
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -2
Query: 437 LLSRDKLSGHYYIVSYVSNTG-HAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRNDC 261
L+++ +L Y+VSY NT + + + VQ+ AIT+ AR++ Y+++SR+DC
Sbjct: 683 LINKRRLRDDLYMVSYRCNTSSRGKESPYKVKKTAAVQIAAAITSKARVYMYEHLSRDDC 742
Query: 260 YQTTTNSAILGSPFPDPAV 204
Y T T+S +LGSP PD V
Sbjct: 743 YYTDTDSIVLGSPLPDKLV 761
>dbj|BAD66817.1| orf284 [Beta vulgaris subsp. vulgaris]
Length = 284
Score = 59.3 bits (142), Expect = 6e-07
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = -2
Query: 446 KDNLLSRDKLSGHYYIVSYVSNTGHAVDLD----WNPPIMSIVQLLIAITTSARIHTYKY 279
+D+ + + + Y+VSY H V D W P S VQL AIT ARI+ + +
Sbjct: 3 QDSFIGCHPIKENQYMVSY-----HTVTADDSFHWAQPKNSAVQLSAAITACARIYMHPF 57
Query: 278 ISRNDCYQTTTNSAILGSPFPD 213
ISR+DCY T T+S +L +P PD
Sbjct: 58 ISRDDCYYTDTDSIVLANPLPD 79
>gb|AFD29780.1| DNA polymerase (mitochondrion) [Silene vulgaris]
Length = 1018
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = -2
Query: 341 MSIVQLLIAITTSARIHTYKYISRNDCYQTTTNSAILGSPFPDPAV 204
+ VQ+ AIT +ARIH YKYI+R+DCY T T+S +LGSP D V
Sbjct: 762 LGAVQVAAAITANARIHMYKYINRDDCYYTDTDSVVLGSPLSDDEV 807
>emb|CAQ52962.1| unnamed protein product [Lolium perenne]
Length = 989
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = -2
Query: 419 LSGHYYIVSYVSNTGHAVDLDWNPPIMSIVQLLIAITTSARIHTYKYISRNDCYQTTTNS 240
L+ I+SY+ + + W PP+ + Q+ AIT +RI Y YISR+DCY T T+S
Sbjct: 728 LTADINIISYIESM-YDTKRKWKPPVNTCPQMSAAITGYSRIKMYPYISRDDCYYTDTDS 786
Query: 239 AILGSPFPDPAV 204
+L +P P+ V
Sbjct: 787 VVLSNPLPEEEV 798