BLASTX nr result
ID: Cocculus23_contig00035330
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00035330
(246 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi... 141 1e-31
emb|CBI15328.3| unnamed protein product [Vitis vinifera] 141 1e-31
ref|XP_006372539.1| hypothetical protein POPTR_0017s02600g [Popu... 137 2e-30
ref|XP_007209927.1| hypothetical protein PRUPE_ppa004540mg [Prun... 137 2e-30
ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containi... 135 8e-30
ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
gb|EXB30970.1| hypothetical protein L484_016828 [Morus notabilis] 132 4e-29
ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containi... 132 4e-29
ref|XP_006394550.1| hypothetical protein EUTSA_v10004006mg [Eutr... 132 6e-29
gb|EYU18365.1| hypothetical protein MIMGU_mgv1a007736mg [Mimulus... 131 1e-28
ref|NP_200904.1| pentatricopeptide repeat-containing protein [Ar... 130 2e-28
ref|XP_002866406.1| pentatricopeptide repeat-containing protein ... 130 2e-28
gb|AAM63453.1| unknown [Arabidopsis thaliana] 130 2e-28
ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Caps... 129 3e-28
ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citr... 129 5e-28
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,... 128 7e-28
gb|EPS61302.1| hypothetical protein M569_13492 [Genlisea aurea] 128 9e-28
ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containi... 127 1e-27
ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Vitis vinifera]
Length = 516
Score = 141 bits (355), Expect = 1e-31
Identities = 67/82 (81%), Positives = 74/82 (90%)
Frame = +1
Query: 1 AGVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGE 180
AGVPRN TFNVLI+NLCKIR+TEDA+KLF RMGEWGC P+ TT++VLTRSLYQAAR+GE
Sbjct: 314 AGVPRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGE 373
Query: 181 GDEMIDRMKSAGFQAALDKKGY 246
GDEMIDRMKSAGF ALDKK Y
Sbjct: 374 GDEMIDRMKSAGFGNALDKKAY 395
>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 141 bits (355), Expect = 1e-31
Identities = 67/82 (81%), Positives = 74/82 (90%)
Frame = +1
Query: 1 AGVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGE 180
AGVPRN TFNVLI+NLCKIR+TEDA+KLF RMGEWGC P+ TT++VLTRSLYQAAR+GE
Sbjct: 330 AGVPRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGE 389
Query: 181 GDEMIDRMKSAGFQAALDKKGY 246
GDEMIDRMKSAGF ALDKK Y
Sbjct: 390 GDEMIDRMKSAGFGNALDKKAY 411
>ref|XP_006372539.1| hypothetical protein POPTR_0017s02600g [Populus trichocarpa]
gi|550319168|gb|ERP50336.1| hypothetical protein
POPTR_0017s02600g [Populus trichocarpa]
Length = 398
Score = 137 bits (345), Expect = 2e-30
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLISNLCK+RRTEDA+KLF R+GEWGC PD TT++VL RSLYQAAR+GEG
Sbjct: 314 GVPRNVETFNVLISNLCKVRRTEDAMKLFSRIGEWGCCPDETTFLVLIRSLYQAARVGEG 373
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRMKSAG+ LDKK Y
Sbjct: 374 DEMIDRMKSAGYGDKLDKKAY 394
>ref|XP_007209927.1| hypothetical protein PRUPE_ppa004540mg [Prunus persica]
gi|462405662|gb|EMJ11126.1| hypothetical protein
PRUPE_ppa004540mg [Prunus persica]
Length = 504
Score = 137 bits (344), Expect = 2e-30
Identities = 65/81 (80%), Positives = 70/81 (86%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLISNLCK+R+TEDAL LF RMGEWGC P+ TT++VL RSLYQ ARIGEG
Sbjct: 301 GVPRNVETFNVLISNLCKLRKTEDALNLFHRMGEWGCYPNETTFLVLIRSLYQGARIGEG 360
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRMKSAGF ALDKK Y
Sbjct: 361 DEMIDRMKSAGFGGALDKKAY 381
>ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 517
Score = 135 bits (339), Expect = 8e-30
Identities = 64/81 (79%), Positives = 70/81 (86%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLI+NLCKIR+T DAL LF RMGEWGC P+ TT++ LTRSLYQAAR+GEG
Sbjct: 316 GVPRNVETFNVLITNLCKIRKTNDALNLFHRMGEWGCSPNETTFLELTRSLYQAARVGEG 375
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRMKSAGF ALDKK Y
Sbjct: 376 DEMIDRMKSAGFGEALDKKAY 396
>ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Solanum tuberosum]
Length = 521
Score = 134 bits (336), Expect = 2e-29
Identities = 64/81 (79%), Positives = 70/81 (86%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPR+ TFNVLI+NLCKIR+TEDAL LF RMGEWGC PD TT++ L RSLYQAAR+GEG
Sbjct: 318 GVPRDVETFNVLITNLCKIRKTEDALNLFYRMGEWGCNPDETTFLTLIRSLYQAARVGEG 377
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRMKSAGF ALDKK Y
Sbjct: 378 DEMIDRMKSAGFGDALDKKAY 398
>gb|EXB30970.1| hypothetical protein L484_016828 [Morus notabilis]
Length = 587
Score = 132 bits (333), Expect = 4e-29
Identities = 62/81 (76%), Positives = 71/81 (87%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLI+NLCKIR+TE+ALK+FERMGEWGC P+ T++VL RSLYQAAR+GEG
Sbjct: 384 GVPRNVETFNVLINNLCKIRKTEEALKVFERMGEWGCYPNEETFLVLIRSLYQAARVGEG 443
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRMKSAG+ LDKK Y
Sbjct: 444 DEMIDRMKSAGYGDKLDKKAY 464
>ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Solanum lycopersicum]
Length = 522
Score = 132 bits (333), Expect = 4e-29
Identities = 63/81 (77%), Positives = 70/81 (86%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPR+ TFNVLI+NLCKIR+TEDAL LF RMGEWGC PD TT++ L RSLYQAAR+GEG
Sbjct: 318 GVPRDVETFNVLITNLCKIRKTEDALNLFYRMGEWGCNPDETTFLTLIRSLYQAARVGEG 377
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRM+SAGF ALDKK Y
Sbjct: 378 DEMIDRMRSAGFGDALDKKAY 398
>ref|XP_006394550.1| hypothetical protein EUTSA_v10004006mg [Eutrema salsugineum]
gi|557091189|gb|ESQ31836.1| hypothetical protein
EUTSA_v10004006mg [Eutrema salsugineum]
Length = 518
Score = 132 bits (331), Expect = 6e-29
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN+ TFNVLI+NLCKIRRTE+A+KLF RMGEWGC D TY+VL RSLYQAARIGEG
Sbjct: 314 GVPRNTKTFNVLINNLCKIRRTEEAMKLFGRMGEWGCQADAETYLVLIRSLYQAARIGEG 373
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMID+MKSAG+ +LDKK Y
Sbjct: 374 DEMIDKMKSAGYGKSLDKKEY 394
>gb|EYU18365.1| hypothetical protein MIMGU_mgv1a007736mg [Mimulus guttatus]
Length = 396
Score = 131 bits (329), Expect = 1e-28
Identities = 61/81 (75%), Positives = 69/81 (85%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLI+NLCKIR+TEDA+ LF RMGEWGC PD TT+ VL +SLYQAAR+GEG
Sbjct: 193 GVPRNVETFNVLITNLCKIRKTEDAMNLFSRMGEWGCYPDETTFYVLIKSLYQAARVGEG 252
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMID+MKSAG+ ALD K Y
Sbjct: 253 DEMIDKMKSAGYGDALDTKAY 273
>ref|NP_200904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262710|sp|Q9FME4.1|PP438_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein PNM1,
mitochondrial; AltName: Full=PPR PROTEIN LOCALIZED TO
THE NUCLEUS AND MITOCHONDRIA 1; Flags: Precursor
gi|10177319|dbj|BAB10645.1| unnamed protein product
[Arabidopsis thaliana] gi|332010020|gb|AED97403.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 521
Score = 130 bits (326), Expect = 2e-28
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN+ TFNVLI+NLCKIRRTE+A+ LF RMGEWGC PD TY+VL RSLYQAARIGEG
Sbjct: 317 GVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEG 376
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMID+MKSAG+ L+KK Y
Sbjct: 377 DEMIDKMKSAGYGELLNKKEY 397
>ref|XP_002866406.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312241|gb|EFH42665.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 522
Score = 130 bits (326), Expect = 2e-28
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN+ TFNVLI+NLCKIRRTE+A+ LF RMGEWGC PD TY+VL RSLYQAARIGEG
Sbjct: 318 GVPRNTETFNVLINNLCKIRRTEEAMTLFARMGEWGCQPDAETYLVLIRSLYQAARIGEG 377
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMID+MKSAG+ L+KK Y
Sbjct: 378 DEMIDKMKSAGYGEFLNKKEY 398
>gb|AAM63453.1| unknown [Arabidopsis thaliana]
Length = 521
Score = 130 bits (326), Expect = 2e-28
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN+ TFNVLI+NLCKIRRTE+A+ LF RMGEWGC PD TY+VL RSLYQAARIGEG
Sbjct: 317 GVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEG 376
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMID+MKSAG+ L+KK Y
Sbjct: 377 DEMIDKMKSAGYGELLNKKEY 397
>ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Capsella rubella]
gi|482550779|gb|EOA14973.1| hypothetical protein
CARUB_v10028321mg [Capsella rubella]
Length = 522
Score = 129 bits (325), Expect = 3e-28
Identities = 61/81 (75%), Positives = 70/81 (86%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN+ TFNVLI+NLCKIRRTE+A+ LF RMGEWGC PD TY+VL +SLYQAARIGEG
Sbjct: 318 GVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIKSLYQAARIGEG 377
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMID+MKSAG+ +L KK Y
Sbjct: 378 DEMIDKMKSAGYSESLTKKEY 398
>ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citrus clementina]
gi|557543056|gb|ESR54034.1| hypothetical protein
CICLE_v10019809mg [Citrus clementina]
Length = 503
Score = 129 bits (323), Expect = 5e-28
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLISNLCKIRRTEDA+KLF RMGEWGC P+ TT++VL +SLYQAAR+GEG
Sbjct: 305 GVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRMKSAG+ A+ KK Y
Sbjct: 365 DEMIDRMKSAGY--AIGKKDY 383
>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 569
Score = 128 bits (322), Expect = 7e-28
Identities = 60/81 (74%), Positives = 69/81 (85%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLI+NLCK+R+T+DAL LF RM EWGC PD TT++VL RSLYQAAR+GEG
Sbjct: 367 GVPRNVETFNVLITNLCKMRKTQDALNLFNRMREWGCDPDDTTFLVLIRSLYQAARVGEG 426
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRMKS+G+ LDKK Y
Sbjct: 427 DEMIDRMKSSGYGNKLDKKAY 447
>gb|EPS61302.1| hypothetical protein M569_13492 [Genlisea aurea]
Length = 536
Score = 128 bits (321), Expect = 9e-28
Identities = 60/81 (74%), Positives = 70/81 (86%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLI+NLC+IR+TE+A+ LF RMGEWGC PD TTYIVL +SLY+AARI EG
Sbjct: 332 GVPRNVDTFNVLITNLCRIRKTEEAMNLFSRMGEWGCYPDETTYIVLIKSLYRAARISEG 391
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
D+M+DRMKSAG+ ALDKK Y
Sbjct: 392 DDMMDRMKSAGYGDALDKKVY 412
>ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Citrus sinensis]
Length = 503
Score = 127 bits (320), Expect = 1e-27
Identities = 62/81 (76%), Positives = 71/81 (87%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLISNLCKIRR+EDA+KLF RMGEWGC P+ TT++VL +SLYQAAR+GEG
Sbjct: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRMKSAG+ A+ KK Y
Sbjct: 365 DEMIDRMKSAGY--AIGKKDY 383
>ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like isoformX1 [Glycine max]
Length = 509
Score = 127 bits (319), Expect = 2e-27
Identities = 61/81 (75%), Positives = 68/81 (83%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLI+NLCKIR+TEDAL LF MGEWGC P+ TT++VL RSLYQAAR+ EG
Sbjct: 309 GVPRNVETFNVLITNLCKIRKTEDALGLFRSMGEWGCYPNETTFLVLIRSLYQAARLEEG 368
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRM+SAGF LDKK Y
Sbjct: 369 DEMIDRMRSAGFGEFLDKKAY 389
>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cucumis sativus]
gi|449477122|ref|XP_004154936.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cucumis sativus]
Length = 522
Score = 127 bits (318), Expect = 2e-27
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = +1
Query: 4 GVPRNSVTFNVLISNLCKIRRTEDALKLFERMGEWGCIPDPTTYIVLTRSLYQAARIGEG 183
GVPRN TFNVLI+NLCKIRRT DA+ LF RMGEWGC P+ T+++L RSLYQAAR GEG
Sbjct: 320 GVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEG 379
Query: 184 DEMIDRMKSAGFQAALDKKGY 246
DEMIDRMKS G+ ALDKK Y
Sbjct: 380 DEMIDRMKSVGYGDALDKKAY 400