BLASTX nr result
ID: Cocculus23_contig00034905
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00034905
(212 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata] g... 81 1e-13
ref|XP_007036762.1| Tetratricopeptide repeat (TPR)-like superfam... 81 2e-13
ref|XP_006467551.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
ref|XP_006449607.1| hypothetical protein CICLE_v10018369mg [Citr... 80 3e-13
ref|XP_006412272.1| hypothetical protein EUTSA_v10027054mg [Eutr... 80 4e-13
ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containi... 79 5e-13
ref|XP_007143255.1| hypothetical protein PHAVU_007G057100g [Phas... 79 7e-13
ref|XP_006428236.1| hypothetical protein CICLE_v10011195mg [Citr... 79 7e-13
gb|EPS69104.1| hypothetical protein M569_05662, partial [Genlise... 79 7e-13
gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indi... 79 7e-13
ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group] g... 79 7e-13
ref|NP_198784.1| pentatricopeptide repeat-containing protein EMB... 79 8e-13
ref|XP_006285141.1| hypothetical protein CARUB_v10006490mg [Caps... 79 8e-13
ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [S... 79 8e-13
ref|XP_002512645.1| pentatricopeptide repeat-containing protein,... 79 8e-13
ref|NP_001141725.1| hypothetical protein [Zea mays] gi|194705708... 79 8e-13
ref|XP_007204168.1| hypothetical protein PRUPE_ppa017537mg [Prun... 78 1e-12
ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_006651327.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_006651199.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
>ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata
subsp. lyrata]
Length = 710
Score = 81.3 bits (199), Expect = 1e-13
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
+CDDCHSAIKLISKI +R I++RDSNRFHHFR+G CSC DYW
Sbjct: 669 ICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710
>ref|XP_007036762.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|590665507|ref|XP_007036763.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
gi|590665511|ref|XP_007036764.1| Tetratricopeptide
repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|508774007|gb|EOY21263.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508774008|gb|EOY21264.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508774009|gb|EOY21265.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 768
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
VC+DCH+AIK ISKIV R IILRDSNRFHHFREG+CSC DYW
Sbjct: 727 VCEDCHNAIKYISKIVGRLIILRDSNRFHHFREGSCSCGDYW 768
>ref|XP_006467551.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Citrus sinensis]
Length = 696
Score = 80.1 bits (196), Expect = 3e-13
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
VC DCH AIKLISKIVRR I++RDS+RFHHFR G+CSC+DYW
Sbjct: 655 VCGDCHHAIKLISKIVRREIVVRDSSRFHHFRSGSCSCRDYW 696
>ref|XP_006449607.1| hypothetical protein CICLE_v10018369mg [Citrus clementina]
gi|557552218|gb|ESR62847.1| hypothetical protein
CICLE_v10018369mg [Citrus clementina]
Length = 652
Score = 80.1 bits (196), Expect = 3e-13
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
VC DCH AIKLISKIVRR I++RDS+RFHHFR G+CSC+DYW
Sbjct: 611 VCGDCHHAIKLISKIVRREIVVRDSSRFHHFRSGSCSCRDYW 652
>ref|XP_006412272.1| hypothetical protein EUTSA_v10027054mg [Eutrema salsugineum]
gi|557113442|gb|ESQ53725.1| hypothetical protein
EUTSA_v10027054mg [Eutrema salsugineum]
Length = 638
Score = 79.7 bits (195), Expect = 4e-13
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
VC DCHSAIKL SK+V R II+RD+NRFHHFR+G+CSC+DYW
Sbjct: 597 VCGDCHSAIKLASKVVEREIIVRDTNRFHHFRDGSCSCRDYW 638
>ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Fragaria vesca subsp. vesca]
Length = 780
Score = 79.3 bits (194), Expect = 5e-13
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
VC+DCH+AIK ISKIV R IILRDSNRFHHF EG+CSC DYW
Sbjct: 739 VCEDCHNAIKYISKIVGRTIILRDSNRFHHFSEGSCSCGDYW 780
>ref|XP_007143255.1| hypothetical protein PHAVU_007G057100g [Phaseolus vulgaris]
gi|561016445|gb|ESW15249.1| hypothetical protein
PHAVU_007G057100g [Phaseolus vulgaris]
Length = 786
Score = 79.0 bits (193), Expect = 7e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
VC+DCHSAIK ISK+V+R II+RD+ RFHHF++G+CSCQDYW
Sbjct: 745 VCNDCHSAIKYISKLVKREIIVRDTTRFHHFKDGSCSCQDYW 786
>ref|XP_006428236.1| hypothetical protein CICLE_v10011195mg [Citrus clementina]
gi|568854166|ref|XP_006480704.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Citrus sinensis]
gi|557530293|gb|ESR41476.1| hypothetical protein
CICLE_v10011195mg [Citrus clementina]
Length = 703
Score = 79.0 bits (193), Expect = 7e-13
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
VC DCHSAIKLISK++ R IILRD+NRFHHF++G CSC+DYW
Sbjct: 662 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 703
>gb|EPS69104.1| hypothetical protein M569_05662, partial [Genlisea aurea]
Length = 775
Score = 79.0 bits (193), Expect = 7e-13
Identities = 30/47 (63%), Positives = 40/47 (85%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW*SEKP 143
VC DCHSAIKL+SK++ R I+LRD+NRFHHF++G+CSC+D+W P
Sbjct: 664 VCGDCHSAIKLVSKVIGREIVLRDANRFHHFKDGSCSCKDFWIDSPP 710
>gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 79.0 bits (193), Expect = 7e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
+C DCH+AIKLIS+IV+R II+RDSNRFHHF++G CSC+DYW
Sbjct: 662 ICGDCHTAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 703
>ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa
Japonica Group] gi|125585525|gb|EAZ26189.1| hypothetical
protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 641
Score = 79.0 bits (193), Expect = 7e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
+C DCH+AIKLIS+IV+R II+RDSNRFHHF++G CSC+DYW
Sbjct: 600 ICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 641
>ref|NP_198784.1| pentatricopeptide repeat-containing protein EMB2744 [Arabidopsis
thaliana] gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like
[Arabidopsis thaliana] gi|332007080|gb|AED94463.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 710
Score = 78.6 bits (192), Expect = 8e-13
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
+CDDCHSAIKLISKI +R I++RDSNRFHHF +G CSC DYW
Sbjct: 669 ICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
>ref|XP_006285141.1| hypothetical protein CARUB_v10006490mg [Capsella rubella]
gi|482553846|gb|EOA18039.1| hypothetical protein
CARUB_v10006490mg [Capsella rubella]
Length = 710
Score = 78.6 bits (192), Expect = 8e-13
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
+CDDCH AIKLISK+ +R I++RDSNRFHHFR+G CSC DYW
Sbjct: 669 ICDDCHFAIKLISKVSKRYIVIRDSNRFHHFRDGKCSCCDYW 710
>ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein
SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 78.6 bits (192), Expect = 8e-13
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
+C DCH+ IKLISKIV+R II+RDSNRFHHF+ G+CSC+DYW
Sbjct: 594 ICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
>ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548606|gb|EEF50097.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 716
Score = 78.6 bits (192), Expect = 8e-13
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
+C DCHSAIKLISKIV+R II+RD NRFHHF++G CSC DYW
Sbjct: 675 ICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716
>ref|NP_001141725.1| hypothetical protein [Zea mays] gi|194705708|gb|ACF86938.1| unknown
[Zea mays] gi|413956425|gb|AFW89074.1| hypothetical
protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 78.6 bits (192), Expect = 8e-13
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
+C DCH+ IKLISKIV+R II+RDSNRFHHF+ G+CSC+DYW
Sbjct: 594 ICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
>ref|XP_007204168.1| hypothetical protein PRUPE_ppa017537mg [Prunus persica]
gi|462399699|gb|EMJ05367.1| hypothetical protein
PRUPE_ppa017537mg [Prunus persica]
Length = 631
Score = 78.2 bits (191), Expect = 1e-12
Identities = 30/42 (71%), Positives = 38/42 (90%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
+C DCHSAIKLISK++ R +ILRD+NRFHHF++G CSC+DYW
Sbjct: 590 ICGDCHSAIKLISKVMGREVILRDANRFHHFKDGLCSCRDYW 631
>ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 78.2 bits (191), Expect = 1e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
VC DCHSAIKLI+KI R IILRD+NRFHHF++G CSC+DYW
Sbjct: 665 VCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
>ref|XP_006651327.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Oryza brachyantha]
Length = 733
Score = 77.8 bits (190), Expect = 1e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
VC DCHSAIKLI+KI R IILRD+NRFHHF++G CSC+DYW
Sbjct: 692 VCGDCHSAIKLIAKITAREIILRDANRFHHFKDGFCSCRDYW 733
>ref|XP_006651199.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Oryza brachyantha]
Length = 637
Score = 77.8 bits (190), Expect = 1e-12
Identities = 30/42 (71%), Positives = 40/42 (95%)
Frame = +3
Query: 3 VCDDCHSAIKLISKIVRRGIILRDSNRFHHFREGACSCQDYW 128
+C DCH+AIKLIS++V+R II+RDSNRFHHF++G+CSC+DYW
Sbjct: 596 ICGDCHTAIKLISQMVQREIIVRDSNRFHHFKKGSCSCRDYW 637