BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00034859
         (269 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]                           72   1e-10
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...    70   3e-10
ref|XP_006385326.1| hypothetical protein POPTR_0003s02830g [Popu...    70   3e-10
emb|CBI36309.3| unnamed protein product [Vitis vinifera]               70   4e-10
emb|CBI33284.3| unnamed protein product [Vitis vinifera]               70   4e-10
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...    70   4e-10
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...    70   4e-10
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...    70   4e-10
ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phas...    69   5e-10
ref|XP_007224810.1| hypothetical protein PRUPE_ppa023586mg, part...    69   7e-10
ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prun...    69   9e-10
ref|XP_007135413.1| hypothetical protein PHAVU_010G127200g [Phas...    68   1e-09
ref|XP_006450803.1| hypothetical protein CICLE_v100094941mg, par...    68   1e-09
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu...    67   2e-09
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr...    66   4e-09
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...    65   8e-09
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu...    65   1e-08
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s...    65   1e-08
ref|XP_004303315.1| PREDICTED: DNA-directed RNA polymerase III s...    64   2e-08
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s...    64   3e-08

>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
          Length = 235

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/77 (48%), Positives = 52/77 (67%)
 Frame = -1

Query: 260 QDNKQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDK 81
           Q  KQ +  S  QSL+  E+ +Y+ +RSK+D+GI+  D+KRETNL D +  KS+K LQ K
Sbjct: 7   QKRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAK 66

Query: 80  MRIKEVSHYLNKGKKNF 30
             IKEV +  NKG+K +
Sbjct: 67  NLIKEVVNIQNKGRKYY 83


>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/64 (53%), Positives = 48/64 (75%)
 Frame = -1

Query: 221 SLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRIKEVSHYLNKG 42
           SL+  ER +Y+ + SK+D+GI+ GD+KRETNL D + KKS+K LQ K  IKEV +  NKG
Sbjct: 23  SLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSLKLLQSKNLIKEVVNIQNKG 82

Query: 41  KKNF 30
           +K++
Sbjct: 83  RKHY 86


>ref|XP_006385326.1| hypothetical protein POPTR_0003s02830g [Populus trichocarpa]
           gi|550342268|gb|ERP63123.1| hypothetical protein
           POPTR_0003s02830g [Populus trichocarpa]
          Length = 127

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/65 (52%), Positives = 49/65 (75%)
 Frame = -1

Query: 224 QSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRIKEVSHYLNK 45
           QSL+  ERK+YD +RSK+D+GI+  D+K+ETNL D +  KS+K+L  K  IKEV +  NK
Sbjct: 23  QSLTDHERKLYDVIRSKKDMGIWTRDMKKETNLPDNVVNKSLKALHAKNLIKEVVNIQNK 82

Query: 44  GKKNF 30
           G+K++
Sbjct: 83  GRKHY 87


>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/74 (48%), Positives = 51/74 (68%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           K+ D  +  Q L   ER +YD +RSKED+GI+  D+KRETNL D +  KS+K+LQ K  I
Sbjct: 102 KRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKKLI 161

Query: 71  KEVSHYLNKGKKNF 30
           KEV +  +KG+K++
Sbjct: 162 KEVVNIQSKGRKHY 175


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/74 (48%), Positives = 51/74 (68%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           K+ D  +  Q L   ER +YD +RSKED+GI+  D+KRETNL D +  KS+K+LQ K  I
Sbjct: 73  KRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKKLI 132

Query: 71  KEVSHYLNKGKKNF 30
           KEV +  +KG+K++
Sbjct: 133 KEVVNIQSKGRKHY 146


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/74 (48%), Positives = 51/74 (68%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           K+ D  +  Q L   ER +YD +RSKED+GI+  D+KRETNL D +  KS+K+LQ K  I
Sbjct: 12  KRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKKLI 71

Query: 71  KEVSHYLNKGKKNF 30
           KEV +  +KG+K++
Sbjct: 72  KEVVNIQSKGRKHY 85


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/74 (48%), Positives = 51/74 (68%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           K+ D  +  Q L   ER +YD +RSKED+GI+  D+KRETNL D +  KS+K+LQ K  I
Sbjct: 12  KRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKKLI 71

Query: 71  KEVSHYLNKGKKNF 30
           KEV +  +KG+K++
Sbjct: 72  KEVVNIQSKGRKHY 85


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/74 (48%), Positives = 51/74 (68%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           K+ D  +  Q L   ER +YD +RSKED+GI+  D+KRETNL D +  KS+K+LQ K  I
Sbjct: 12  KRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKKLI 71

Query: 71  KEVSHYLNKGKKNF 30
           KEV +  +KG+K++
Sbjct: 72  KEVVNIQSKGRKHY 85


>ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
           gi|561012478|gb|ESW11339.1| hypothetical protein
           PHAVU_008G021700g [Phaseolus vulgaris]
          Length = 239

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/64 (51%), Positives = 48/64 (75%)
 Frame = -1

Query: 221 SLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRIKEVSHYLNKG 42
           S++  ER +Y+ + SK+D+GI+ GD+KRETNL D + KKS+K LQ K  IKEV +  NKG
Sbjct: 23  SMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSLKLLQSKNLIKEVVNIQNKG 82

Query: 41  KKNF 30
           +K++
Sbjct: 83  RKHY 86


>ref|XP_007224810.1| hypothetical protein PRUPE_ppa023586mg, partial [Prunus persica]
           gi|462421746|gb|EMJ26009.1| hypothetical protein
           PRUPE_ppa023586mg, partial [Prunus persica]
          Length = 260

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 36/74 (48%), Positives = 52/74 (70%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           KQ D  S  +SL+  E+ +Y+ +RSK+D+GI+  D+K+E NL D L  KSIKSLQ K  I
Sbjct: 135 KQPDSNSPSESLTEHEKIVYNVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQAKNLI 194

Query: 71  KEVSHYLNKGKKNF 30
           KEV +  +KG+K++
Sbjct: 195 KEVVNVQSKGRKHY 208


>ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
           gi|462404542|gb|EMJ10006.1| hypothetical protein
           PRUPE_ppa024742mg [Prunus persica]
          Length = 236

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 36/74 (48%), Positives = 51/74 (68%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           KQ D  S  +SL+  E+ +Y  +RSK+D+GI+  D+K+E NL D L  KSIKSLQ K  I
Sbjct: 10  KQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQAKNLI 69

Query: 71  KEVSHYLNKGKKNF 30
           KEV +  +KG+K++
Sbjct: 70  KEVVNVQSKGRKHY 83


>ref|XP_007135413.1| hypothetical protein PHAVU_010G127200g [Phaseolus vulgaris]
           gi|561008458|gb|ESW07407.1| hypothetical protein
           PHAVU_010G127200g [Phaseolus vulgaris]
          Length = 236

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/66 (50%), Positives = 47/66 (71%)
 Frame = -1

Query: 233 SLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRIKEVSHY 54
           +L  S++  ER +Y+ +R K+++GI+QGDIKRETN+ D + KKS+K L  K  IKEV + 
Sbjct: 16  TLSASMTNEERAVYNIIRGKKEMGIWQGDIKRETNIPDSMLKKSVKLLISKTLIKEVVNI 75

Query: 53  LNKGKK 36
            NK KK
Sbjct: 76  QNKSKK 81


>ref|XP_006450803.1| hypothetical protein CICLE_v100094941mg, partial [Citrus
           clementina] gi|557554029|gb|ESR64043.1| hypothetical
           protein CICLE_v100094941mg, partial [Citrus clementina]
          Length = 153

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
 Frame = -1

Query: 263 LQDNKQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRE--TNLADPLFKKSIKSL 90
           +   K+ D  +   SL+  ER IYD +RSK+D+GI+  D+KRE   NL D +  KSIKSL
Sbjct: 19  MSKRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELKVNLPDNIVTKSIKSL 78

Query: 89  QDKMRIKEVSHYLNKGKKN 33
           Q+K  IKEV +  NKGKK+
Sbjct: 79  QNKSLIKEVVNIHNKGKKH 97


>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
           gi|222866141|gb|EEF03272.1| hypothetical protein
           POPTR_0018s04220g [Populus trichocarpa]
          Length = 239

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/74 (47%), Positives = 51/74 (68%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           K+ +  S  QSL+  ER +YD +RSK+D+GI+  D+K+E  L D +  KS+K+LQ K  I
Sbjct: 13  KRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSLKALQVKKLI 72

Query: 71  KEVSHYLNKGKKNF 30
           KEV +  NKG+K+F
Sbjct: 73  KEVVNIQNKGRKHF 86


>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
           gi|557529238|gb|ESR40488.1| hypothetical protein
           CICLE_v10026399mg [Citrus clementina]
          Length = 233

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
 Frame = -1

Query: 263 LQDNKQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRE--TNLADPLFKKSIKSL 90
           +   K+ D  +   SL+  ER IYD +RSK+D+GI+  D+KRE   NL D +  KSIKSL
Sbjct: 1   MSKRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSL 60

Query: 89  QDKMRIKEVSHYLNKGKKN 33
           Q+K  IKEV +  +KGKK+
Sbjct: 61  QNKSLIKEVVNIHSKGKKH 79


>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 35/74 (47%), Positives = 50/74 (67%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           KQ +  S  QSL+  E  +Y+ + SK+D+GI+  D+KRETNL D +  KS+K LQ K  I
Sbjct: 10  KQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQAKNLI 69

Query: 71  KEVSHYLNKGKKNF 30
           KEV +  NKG+K++
Sbjct: 70  KEVVNIQNKGRKHY 83


>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
           gi|550346475|gb|EEE82426.2| hypothetical protein
           POPTR_0001s04090g [Populus trichocarpa]
          Length = 291

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 34/74 (45%), Positives = 51/74 (68%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           K+ +  S  QSL+  ER +YD +RSK+D+GI+  D+K+E  L D +  KS+K+L+ K  I
Sbjct: 65  KRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSLKALRVKNLI 124

Query: 71  KEVSHYLNKGKKNF 30
           KEV +  NKG+K+F
Sbjct: 125 KEVVNIQNKGRKHF 138


>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Citrus sinensis]
          Length = 233

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
 Frame = -1

Query: 263 LQDNKQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRE--TNLADPLFKKSIKSL 90
           +   K+ +  +   SL+  ER IYD +RSK+D+GI+  D+KRE   NL D +  KSIKSL
Sbjct: 1   MSKRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSL 60

Query: 89  QDKMRIKEVSHYLNKGKKN 33
           Q+K  IKEV +  +KGKK+
Sbjct: 61  QNKSLIKEVVNIHSKGKKH 79


>ref|XP_004303315.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           isoform 1 [Fragaria vesca subsp. vesca]
           gi|470134993|ref|XP_004303316.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc6-like isoform 2 [Fragaria
           vesca subsp. vesca] gi|470134995|ref|XP_004303317.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           rpc6-like isoform 3 [Fragaria vesca subsp. vesca]
          Length = 236

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/74 (45%), Positives = 51/74 (68%)
 Frame = -1

Query: 251 KQIDGKSLFQSLSAVERKIYDCLRSKEDLGIFQGDIKRETNLADPLFKKSIKSLQDKMRI 72
           K++D +S   SL+  E K+YD +RSK D+G+   D++RET L   LF K+IK+LQ K  I
Sbjct: 13  KRLDSQS--GSLTEHESKLYDAIRSKTDMGMSVQDLRRETGLQTNLFTKAIKTLQAKQLI 70

Query: 71  KEVSHYLNKGKKNF 30
           KEV ++ NK +K++
Sbjct: 71  KEVKNFDNKTRKHY 84


>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X2 [Citrus sinensis]
          Length = 234

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
 Frame = -1

Query: 263 LQDNKQIDGKSLFQSLSAVERKIYDCLRS-KEDLGIFQGDIKRE--TNLADPLFKKSIKS 93
           +   K+ D  +   SL+  ER IYD +RS K+D+GI+  D+KRE   NL D +  KSIKS
Sbjct: 1   MSKRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKS 60

Query: 92  LQDKMRIKEVSHYLNKGKKN 33
           LQ+K  IKEV +  NKGKK+
Sbjct: 61  LQNKSLIKEVVNIHNKGKKH 80