BLASTX nr result
ID: Cocculus23_contig00034835
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00034835
(321 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer ar... 103 2e-20
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar... 103 3e-20
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar... 102 4e-20
ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer ar... 102 4e-20
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 102 6e-20
ref|XP_004509642.1| PREDICTED: genome polyprotein-like [Cicer ar... 99 5e-19
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar... 99 8e-19
ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer ar... 97 2e-18
ref|XP_004515135.1| PREDICTED: genome polyprotein-like [Cicer ar... 89 5e-16
ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer ar... 89 8e-16
ref|XP_004488974.1| PREDICTED: genome polyprotein-like [Cicer ar... 85 9e-15
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 83 4e-14
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 83 4e-14
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 83 4e-14
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 81 1e-13
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 81 1e-13
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 81 1e-13
ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Popu... 80 2e-13
ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, part... 79 5e-13
ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, part... 79 7e-13
>ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 181
Score = 103 bits (258), Expect = 2e-20
Identities = 49/92 (53%), Positives = 65/92 (70%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F G QP PHIA++LLN+PDENLTIK++ QFL I+N++ +FIPK A+Y + SQ+
Sbjct: 17 LGIHFSQGKFQPQPHIAQELLNFPDENLTIKQIQQFLGIINYIRNFIPKLAKYTSPLSQL 76
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L KNPSP T V+ LK++ PP L IP
Sbjct: 77 LSKNPSPWKPKHTEAVKALKRIAHTPPALKIP 108
>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 894
Score = 103 bits (256), Expect = 3e-20
Identities = 48/92 (52%), Positives = 65/92 (70%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F G QP PHIA++LLN+PDENLT+K++ QFL I+N++ +FIPK A+Y + SQ+
Sbjct: 752 LGMHFSQGKYQPQPHIAQELLNFPDENLTVKQIQQFLGIINYIRNFIPKLARYTSPLSQL 811
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L KNP P T V+ LK++ Q PP L IP
Sbjct: 812 LKKNPPPWEPKHTEAVKTLKRIAQTPPALKIP 843
>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1645
Score = 102 bits (255), Expect = 4e-20
Identities = 48/92 (52%), Positives = 65/92 (70%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F G QP PHIA++LLN+PDENLT+K++ QFL I+N++ +FIPK A+Y + SQ+
Sbjct: 1487 LGMHFSQGKYQPHPHIAQELLNFPDENLTVKQIQQFLGIINYIRNFIPKLARYTSPLSQL 1546
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L KNP P T V+ LK++ Q PP L IP
Sbjct: 1547 LRKNPPPWEPKYTEAVKTLKRIAQTPPALKIP 1578
>ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 279
Score = 102 bits (255), Expect = 4e-20
Identities = 48/92 (52%), Positives = 65/92 (70%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F G QP PHIA++LLN+PDENLT+K++ QFL I+N++ +FIPK A+Y + SQ+
Sbjct: 108 LGMHFSQGKYQPQPHIAQELLNFPDENLTVKQIQQFLGIINYIRNFIPKLAKYTSPLSQL 167
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L KNP P T V+ LK++ Q PP L IP
Sbjct: 168 LKKNPPPWELKHTEAVKTLKRIAQTPPALKIP 199
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 102 bits (254), Expect = 6e-20
Identities = 47/92 (51%), Positives = 65/92 (70%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F G QP PHIA++LLN+PDENLT+K++ QFL I+N++ FIPK A+Y + SQ+
Sbjct: 1542 LGMHFSQGKYQPQPHIAQELLNFPDENLTVKQIQQFLGIINYIRDFIPKLAKYTSPLSQL 1601
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L KNP P T ++ LK+++Q PP L IP
Sbjct: 1602 LKKNPPPWEPKHTKAIKTLKRISQTPPALKIP 1633
>ref|XP_004509642.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 168
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/92 (50%), Positives = 64/92 (69%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F G QP PH+AK+LLN+ DENLT+K++ QFL I+N++ +FIP+ A+Y + SQ+
Sbjct: 17 LGMHFSQGKYQPQPHVAKELLNFLDENLTVKQIQQFLGIINYIRNFIPRLARYTSPLSQL 76
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L KNP P T V+ LK++ Q PP L IP
Sbjct: 77 LRKNPPPWDPKHTDAVKALKRIAQTPPALKIP 108
>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 803
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/92 (51%), Positives = 64/92 (69%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F G Q PHIA++LLN+PDENLT+K++ QFL I+N++ +FIPK A+Y + SQ+
Sbjct: 618 LGMHFSQGKYQHQPHIAQELLNFPDENLTVKQIQQFLGIINYIRNFIPKLARYTSPLSQL 677
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L KN SP T V+ LK++ Q PP L IP
Sbjct: 678 LKKNSSPWEPKHTEAVKTLKRIAQTPPALKIP 709
>ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 313
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/92 (50%), Positives = 64/92 (69%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F QP PHIA++LLN+PDENLT+K++ QFL I+N++ +FIPK A+Y + SQ+
Sbjct: 113 LGMHFSQRKYQPQPHIAQELLNFPDENLTVKKIQQFLGIINYIQNFIPKLARYTSPLSQL 172
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L KN P T VV+ +K++ Q PP L IP
Sbjct: 173 LRKNSPPWEPKHTEVVKTVKRIAQTPPALKIP 204
>ref|XP_004515135.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 159
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/90 (46%), Positives = 59/90 (65%)
Frame = +1
Query: 7 LDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQMLG 186
+ F G QP PHIA++LLN+P+ENLT ++ QFL I+N++ +FIPK A+Y + SQ+L
Sbjct: 1 MHFSQGKYQPQPHIARELLNFPEENLTFIKIQQFLGIINYIRNFIPKLARYTSPLSQLLR 60
Query: 187 KNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
KNP P + LK++ Q PP L IP
Sbjct: 61 KNPPPWEPKHIEAFKALKRIAQTPPALKIP 90
>ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 441
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/91 (49%), Positives = 62/91 (68%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F G QP PHIA++LLN+ DENLTIK++ QFL I+N++ +FIPK A+Y + S +
Sbjct: 289 LGMHFSQGKYQPQPHIAQELLNFLDENLTIKQIQQFLGIINYIKNFIPKLAKYTSPLSLL 348
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTI 273
L KN P + T VV+ LKK+ Q P + I
Sbjct: 349 LRKNHPPWETKHTKVVKALKKVAQIPLAMKI 379
>ref|XP_004488974.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 260
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/80 (51%), Positives = 55/80 (68%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F G QP PHIA++LLN+ DENLT+K++ QFL IVN++ +FIPK A+Y + SQ+
Sbjct: 178 LGMHFSQGKYQPQPHIAQELLNFSDENLTVKQIQQFLGIVNYIWNFIPKLARYTSPLSQL 237
Query: 181 LGKNPSP*GSSQTHVVRQLK 240
L KNP P V+ LK
Sbjct: 238 LRKNPPPWEPKHIEAVKTLK 257
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 83.2 bits (204), Expect = 4e-14
Identities = 39/88 (44%), Positives = 55/88 (62%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ DG QPG H+A++LL++PD+ L+ K+V QFL I+N++ FIP Y H S +
Sbjct: 1430 LGMIIKDGHYQPGKHVAQELLHFPDQQLSKKQVQQFLGIINYIRDFIPHVDHYTRHLSAL 1489
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPP 264
L K P T+ V LKK+ Q+PPP
Sbjct: 1490 LKKKPPEWNDDHTNAVTTLKKIAQNPPP 1517
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 83.2 bits (204), Expect = 4e-14
Identities = 39/88 (44%), Positives = 55/88 (62%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ DG QPG H+A++LL++PD+ L+ K+V QFL I+N++ FIP Y H S +
Sbjct: 1528 LGMIIKDGHYQPGKHVAQELLHFPDQQLSKKQVQQFLGIINYIRDFIPHVDHYTRHLSAL 1587
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPP 264
L K P T+ V LKK+ Q+PPP
Sbjct: 1588 LKKKPPEWNDDHTNAVTTLKKIAQNPPP 1615
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 83.2 bits (204), Expect = 4e-14
Identities = 39/88 (44%), Positives = 55/88 (62%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ DG QPG H+A++LL++PD+ L+ K+V QFL I+N++ FIP Y H S +
Sbjct: 1541 LGMIIKDGHYQPGKHVAQELLHFPDQQLSKKQVQQFLGIINYIRDFIPHVDHYTRHLSAL 1600
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPP 264
L K P T+ V LKK+ Q+PPP
Sbjct: 1601 LKKKPPEWNDDHTNAVTTLKKIAQNPPP 1628
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/92 (43%), Positives = 57/92 (61%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+DF DG P HI+ +L +PD NL++K++ QFL IVN++ FIP+ ++ + S M
Sbjct: 1588 LGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFLGIVNYIRDFIPEVTEHISPLSDM 1647
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L K P G Q + V+QLK+L Q L IP
Sbjct: 1648 LKKKPPAWGKCQDNAVKQLKQLAQQVKSLHIP 1679
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/92 (43%), Positives = 57/92 (61%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+DF DG P HI+ +L +PD NL++K++ QFL IVN++ FIP+ ++ + S M
Sbjct: 1588 LGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFLGIVNYIRDFIPEVTEHISPLSDM 1647
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L K P G Q + V+QLK+L Q L IP
Sbjct: 1648 LKKKPPAWGKCQDNAVKQLKQLAQQVKSLHIP 1679
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/92 (43%), Positives = 57/92 (61%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+DF DG P HI+ +L +PD NL++K++ QFL IVN++ FIP+ ++ + S M
Sbjct: 1587 LGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFLGIVNYIRDFIPEVTEHISPLSDM 1646
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L K P G Q + V+QLK+L Q L IP
Sbjct: 1647 LKKKPPAWGKCQDNAVKQLKQLAQQVKSLHIP 1678
>ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Populus trichocarpa]
gi|550326181|gb|ERP54440.1| hypothetical protein
POPTR_0012s01890g [Populus trichocarpa]
Length = 1153
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/92 (47%), Positives = 55/92 (59%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ F DG PG HIA++L + D L+ K+V QFL IV +L +FIP+ AQ M
Sbjct: 1047 LGMVFADGAYTPGTHIAEELQKFSDGPLSRKQVQQFLGIVQYLRNFIPRVAQMTRPLQLM 1106
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L K+ P QTH VRQLK TQ+ P L IP
Sbjct: 1107 LKKDADPWTEKQTHAVRQLKTATQNLPALVIP 1138
>ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, partial [Eutrema salsugineum]
gi|557106803|gb|ESQ47118.1| hypothetical protein
EUTSA_v10028343mg, partial [Eutrema salsugineum]
Length = 1104
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/92 (42%), Positives = 56/92 (60%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ +G P H+A LL++PDENLT +++ QFL ++N++ FIP+ +Q +M
Sbjct: 1002 LGMQITEGKFTPQAHLATALLDFPDENLTRRQIQQFLGVINYISDFIPQLSQMTRPLQKM 1061
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L KNP + QT V+ LKK Q PPL IP
Sbjct: 1062 LTKNPPTWATKQTEAVKSLKKEIQKLPPLKIP 1093
>ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, partial [Eutrema salsugineum]
gi|557104462|gb|ESQ44802.1| hypothetical protein
EUTSA_v10003417mg, partial [Eutrema salsugineum]
Length = 988
Score = 79.0 bits (193), Expect = 7e-13
Identities = 39/92 (42%), Positives = 56/92 (60%)
Frame = +1
Query: 1 LGLDFFDGVNQPGPHIAKDLLNYPDENLTIKEV*QFLDIVNFL*SFIPKTAQYNTHFSQM 180
LG+ +G P H+A LL++PDENLT ++V QFL ++N++ FIP+ +Q +M
Sbjct: 868 LGMQITEGKFTPQAHLATALLDFPDENLTRRQVQQFLGVINYISDFIPQISQRTRPLQKM 927
Query: 181 LGKNPSP*GSSQTHVVRQLKKLTQHPPPLTIP 276
L KNP + QT ++ LKK Q PPL IP
Sbjct: 928 LTKNPPTWATKQTEAIKSLKKEIQKLPPLKIP 959