BLASTX nr result
ID: Cocculus23_contig00034718
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00034718
(588 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A... 267 2e-69
gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Mo... 253 2e-65
ref|XP_007213859.1| hypothetical protein PRUPE_ppa019338mg [Prun... 250 2e-64
ref|XP_007215321.1| hypothetical protein PRUPE_ppa003564mg [Prun... 249 5e-64
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin... 246 3e-63
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin... 246 3e-63
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin... 242 5e-62
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin... 242 5e-62
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr... 242 5e-62
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 242 5e-62
ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citr... 242 6e-62
ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citr... 239 5e-61
ref|XP_004294464.1| PREDICTED: zinc finger CCCH domain-containin... 238 1e-60
ref|XP_002320513.1| RNA recognition motif-containing family prot... 236 5e-60
ref|XP_007020605.1| RNA binding protein, putative isoform 2 [The... 234 1e-59
ref|XP_007020604.1| RNA binding protein, putative isoform 1 [The... 233 2e-59
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo... 230 2e-58
ref|XP_007049317.1| CCCH-type zinc fingerfamily protein with RNA... 221 1e-55
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin... 218 7e-55
emb|CBI28414.3| unnamed protein product [Vitis vinifera] 206 3e-51
>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
gi|548839320|gb|ERM99613.1| hypothetical protein
AMTR_s00088p00158600 [Amborella trichopoda]
Length = 575
Score = 267 bits (682), Expect = 2e-69
Identities = 134/194 (69%), Positives = 156/194 (80%), Gaps = 1/194 (0%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTEEDVSNYF++FGPVQDVRIPCQQKRMFGFVTF+YPETVK+IL KGNPHF+CGARVLVK
Sbjct: 361 FTEEDVSNYFRTFGPVQDVRIPCQQKRMFGFVTFMYPETVKMILNKGNPHFVCGARVLVK 420
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSH-LDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSRLV DRK+ E + VYY H LDMEP++ S+ + ++RLIRKQ EEQE
Sbjct: 421 PYREKSRLV-DRKYPEKIDHPVYYSPHFLDMEPEYQSVPGIWDDARLIRKQLREEQEHAI 479
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSDE 539
E+ER LSE +A+KPL+H YFGY MD+ KLSE N PS DRF YL+DVLNS S SD+
Sbjct: 480 ELERRRLSEFQMASKPLSHN-YFGYPMDDFKLSEDQNGFPSTDRFGYLLDVLNSDSASDD 538
Query: 540 KTRHSSTNYGDQES 581
KTRH+S NY DQES
Sbjct: 539 KTRHASGNYSDQES 552
>gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 556
Score = 253 bits (647), Expect = 2e-65
Identities = 124/195 (63%), Positives = 156/195 (80%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTEEDVSNYF +FG V+DVRIPCQQKRMFGFVTF +TVK+ILAKGNPHF+CGARVLVK
Sbjct: 342 FTEEDVSNYFNTFGTVEDVRIPCQQKRMFGFVTFAIADTVKMILAKGNPHFVCGARVLVK 401
Query: 183 PYKEKSRLVIDRKHAENTEPLVYY-PSHLDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKS+LV DRK+++ E VYY P + DME +FHS+ + NSRL+R+QF+E+ E+
Sbjct: 402 PYREKSKLV-DRKYSDRFEAPVYYSPHYSDMEAEFHSISRSYENSRLLRRQFMEQHERAL 460
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSDE 539
E+E LS +HLA KP+ +QP+FGYSMDELK+SE LPS D+ S L+DVLN STSD+
Sbjct: 461 ELETRRLSGMHLAGKPVNNQPFFGYSMDELKVSEDQFTLPSTDQVSRLLDVLNCGSTSDD 520
Query: 540 KTRHSSTNYGDQESQ 584
K +H+ T++ DQESQ
Sbjct: 521 KFKHTDTHFTDQESQ 535
>ref|XP_007213859.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
gi|462409724|gb|EMJ15058.1| hypothetical protein
PRUPE_ppa019338mg [Prunus persica]
Length = 564
Score = 250 bits (639), Expect = 2e-64
Identities = 122/196 (62%), Positives = 151/196 (77%), Gaps = 1/196 (0%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
F+E+DVSNYF +FGPV+DVRIPCQQKRMFGFVTFV+ +TVK+ILAKGNPH++CG+RVLVK
Sbjct: 350 FSEDDVSNYFSTFGPVEDVRIPCQQKRMFGFVTFVHADTVKMILAKGNPHYVCGSRVLVK 409
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPS-HLDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKS+LV DRKH E +P Y H DME DF+S+ G NSRL+RK+ +EEQE
Sbjct: 410 PYREKSKLV-DRKHQERMDPAAYLSQHHADMESDFYSMSVGCDNSRLLRKKLVEEQEYAI 468
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSDE 539
E+ERM L+ LH A KP+A+ P+ Y MD K SE + PS + F+YL DVLNS STSD+
Sbjct: 469 ELERMRLAGLHFARKPVANHPHSSYFMDGHKFSEDNFNFPSAECFNYLFDVLNSGSTSDD 528
Query: 540 KTRHSSTNYGDQESQG 587
K +H+ TNY D ESQG
Sbjct: 529 KHKHTDTNYTDHESQG 544
>ref|XP_007215321.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
gi|462411471|gb|EMJ16520.1| hypothetical protein
PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 249 bits (635), Expect = 5e-64
Identities = 124/197 (62%), Positives = 152/197 (77%), Gaps = 4/197 (2%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF +GPVQDVRIPCQQKRMFGFVTFVY ETV+ IL+KGNPHF+CGARVLVK
Sbjct: 347 FTEQDVSNYFNKYGPVQDVRIPCQQKRMFGFVTFVYAETVRHILSKGNPHFVCGARVLVK 406
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSH-LDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSRLV DRK +E + + Y SH +D + +FHS+ N+R +RKQF+EE EQ
Sbjct: 407 PYREKSRLV-DRKFSEKMQHAMCYNSHFIDADSEFHSMPRVCENARFLRKQFMEENEQAL 465
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGH---NELPSMDRFSYLIDVLNSAST 530
E+ER LSE+HLAAKPL+H Y+GY MDE K E H E+PS F+YL+DVLN+ ST
Sbjct: 466 ELERRRLSEMHLAAKPLSHHFYYGYPMDEFKHPEAHAEQAEVPSAKEFTYLLDVLNNGST 525
Query: 531 SDEKTRHSSTNYGDQES 581
S+ K RH ++NY DQ+S
Sbjct: 526 SEGKIRHRNSNYNDQDS 542
>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X4 [Citrus sinensis]
Length = 578
Score = 246 bits (629), Expect = 3e-63
Identities = 123/199 (61%), Positives = 152/199 (76%), Gaps = 4/199 (2%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTFV+ ETVK ILAKGNPHF+CGARVLVK
Sbjct: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSHL-DMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSRLV DRK+ E + ++ H D + + H++ NSRL+RKQ +EE EQ
Sbjct: 421 PYREKSRLV-DRKYVEKMQHPLFCSLHFTDGDTELHTMPRVCNNSRLLRKQLMEEHEQAI 479
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEG---HNELPSMDRFSYLIDVLNSAST 530
E+ER LSE+ LA KP+ H YFGYSMDEL++SE + PS +RF+YL+DVLN+ ST
Sbjct: 480 ELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGST 539
Query: 531 SDEKTRHSSTNYGDQESQG 587
S+++ H ST+Y DQ+SQG
Sbjct: 540 SEDQVSHISTHYNDQDSQG 558
>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X2 [Citrus sinensis]
Length = 581
Score = 246 bits (629), Expect = 3e-63
Identities = 123/199 (61%), Positives = 152/199 (76%), Gaps = 4/199 (2%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTFV+ ETVK ILAKGNPHF+CGARVLVK
Sbjct: 364 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 423
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSHL-DMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSRLV DRK+ E + ++ H D + + H++ NSRL+RKQ +EE EQ
Sbjct: 424 PYREKSRLV-DRKYVEKMQHPLFCSLHFTDGDTELHTMPRVCNNSRLLRKQLMEEHEQAI 482
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEG---HNELPSMDRFSYLIDVLNSAST 530
E+ER LSE+ LA KP+ H YFGYSMDEL++SE + PS +RF+YL+DVLN+ ST
Sbjct: 483 ELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGST 542
Query: 531 SDEKTRHSSTNYGDQESQG 587
S+++ H ST+Y DQ+SQG
Sbjct: 543 SEDQVSHISTHYNDQDSQG 561
>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X3 [Citrus sinensis]
Length = 579
Score = 242 bits (618), Expect = 5e-62
Identities = 121/197 (61%), Positives = 150/197 (76%), Gaps = 4/197 (2%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTFV+ ETVK ILAKGNPHF+CGARVLVK
Sbjct: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSHL-DMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSRLV DRK+ E + ++ H D + + H++ NSRL+RKQ +EE EQ
Sbjct: 421 PYREKSRLV-DRKYVEKMQHPLFCSLHFTDGDTELHTMPRVCNNSRLLRKQLMEEHEQAI 479
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEG---HNELPSMDRFSYLIDVLNSAST 530
E+ER LSE+ LA KP+ H YFGYSMDEL++SE + PS +RF+YL+DVLN+ ST
Sbjct: 480 ELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGST 539
Query: 531 SDEKTRHSSTNYGDQES 581
S+++ H ST+Y DQ+S
Sbjct: 540 SEDQVSHISTHYNDQDS 556
>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X1 [Citrus sinensis]
Length = 582
Score = 242 bits (618), Expect = 5e-62
Identities = 121/197 (61%), Positives = 150/197 (76%), Gaps = 4/197 (2%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTFV+ ETVK ILAKGNPHF+CGARVLVK
Sbjct: 364 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 423
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSHL-DMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSRLV DRK+ E + ++ H D + + H++ NSRL+RKQ +EE EQ
Sbjct: 424 PYREKSRLV-DRKYVEKMQHPLFCSLHFTDGDTELHTMPRVCNNSRLLRKQLMEEHEQAI 482
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEG---HNELPSMDRFSYLIDVLNSAST 530
E+ER LSE+ LA KP+ H YFGYSMDEL++SE + PS +RF+YL+DVLN+ ST
Sbjct: 483 ELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGST 542
Query: 531 SDEKTRHSSTNYGDQES 581
S+++ H ST+Y DQ+S
Sbjct: 543 SEDQVSHISTHYNDQDS 559
>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
gi|557550378|gb|ESR61007.1| hypothetical protein
CICLE_v10014902mg [Citrus clementina]
Length = 524
Score = 242 bits (618), Expect = 5e-62
Identities = 121/197 (61%), Positives = 150/197 (76%), Gaps = 4/197 (2%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTFV+ ETVK ILAKGNPHF+CGARVLVK
Sbjct: 306 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 365
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSHL-DMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSRLV DRK+ E + ++ H D + + H++ NSRL+RKQ +EE EQ
Sbjct: 366 PYREKSRLV-DRKYVEKMQHPLFCSLHFTDGDTELHTMPRVCNNSRLLRKQLMEEHEQAI 424
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEG---HNELPSMDRFSYLIDVLNSAST 530
E+ER LSE+ LA KP+ H YFGYSMDEL++SE + PS +RF+YL+DVLN+ ST
Sbjct: 425 ELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGST 484
Query: 531 SDEKTRHSSTNYGDQES 581
S+++ H ST+Y DQ+S
Sbjct: 485 SEDQVSHISTHYNDQDS 501
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein,
putative [Ricinus communis]
Length = 578
Score = 242 bits (618), Expect = 5e-62
Identities = 124/196 (63%), Positives = 146/196 (74%), Gaps = 1/196 (0%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE DVS YF FGPVQDVRIPCQQKRMFGFVTF++ ETVK ILAKGNPH++CGARVLVK
Sbjct: 364 FTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVCGARVLVK 423
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSH-LDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSRL IDRK +E + +Y SH +D + + H + + NSRL+RKQ +EE E
Sbjct: 424 PYREKSRL-IDRKFSEKLQHPMYNSSHFIDGDSELHPMPTISDNSRLLRKQLMEENEHAL 482
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSDE 539
E ER L E HL K L HQ Y G SMDELKLSE H E PS +RF+YL+DVLN+ S+S+
Sbjct: 483 EFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSEEHAEFPSAERFNYLLDVLNNGSSSEG 542
Query: 540 KTRHSSTNYGDQESQG 587
K R STNY DQ+SQG
Sbjct: 543 KFRRISTNYNDQDSQG 558
>ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
gi|567921054|ref|XP_006452533.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|567921058|ref|XP_006452535.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|568841990|ref|XP_006474936.1| PREDICTED: zinc finger
CCCH domain-containing protein 18-like isoform X1
[Citrus sinensis] gi|568841992|ref|XP_006474937.1|
PREDICTED: zinc finger CCCH domain-containing protein
18-like isoform X2 [Citrus sinensis]
gi|557555758|gb|ESR65772.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555759|gb|ESR65773.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555761|gb|ESR65775.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
Length = 565
Score = 242 bits (617), Expect = 6e-62
Identities = 119/196 (60%), Positives = 146/196 (74%), Gaps = 1/196 (0%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF ++GPV DVRIPCQQKRMFGFVTF +TVK+ILAKGNPHF+CGARVLVK
Sbjct: 351 FTEDDVSNYFNTYGPVDDVRIPCQQKRMFGFVTFASADTVKMILAKGNPHFVCGARVLVK 410
Query: 183 PYKEKSRLVIDRKHAENTE-PLVYYPSHLDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKS+LV DRK+ E E P+ + P ++DM+ D HS G SR IRKQ +EEQEQ
Sbjct: 411 PYREKSKLV-DRKYQERMESPMYFSPQYVDMDSDLHSFSRGCETSRFIRKQLLEEQEQAF 469
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSDE 539
E+ER L+EL L KP+ + PYFG MD LK+SE PS +R YLI VLN+ ST+ +
Sbjct: 470 ELERRRLAELQLVRKPMPNPPYFGGYMDGLKISEDRLNFPSAERIDYLIGVLNNGSTTGD 529
Query: 540 KTRHSSTNYGDQESQG 587
+ +H TNY DQES+G
Sbjct: 530 RVKHVETNYTDQESEG 545
>ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
gi|567921060|ref|XP_006452536.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|567921062|ref|XP_006452537.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555760|gb|ESR65774.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555762|gb|ESR65776.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555763|gb|ESR65777.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
Length = 547
Score = 239 bits (609), Expect = 5e-61
Identities = 118/196 (60%), Positives = 144/196 (73%), Gaps = 1/196 (0%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF ++GPV DVRIPCQQKRMFGFVTF +TVK+ILAKGNPHF+CGARVLVK
Sbjct: 351 FTEDDVSNYFNTYGPVDDVRIPCQQKRMFGFVTFASADTVKMILAKGNPHFVCGARVLVK 410
Query: 183 PYKEKSRLVIDRKHAENTE-PLVYYPSHLDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKS+LV DRK+ E E P+ + P ++DM+ D HS G SR IRKQ +EEQEQ
Sbjct: 411 PYREKSKLV-DRKYQERMESPMYFSPQYVDMDSDLHSFSRGCETSRFIRKQLLEEQEQAF 469
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSDE 539
E+ER L+EL L KP+ + PYFG MD LK+SE PS +R YLI VLN+ ST+ +
Sbjct: 470 ELERRRLAELQLVRKPMPNPPYFGGYMDGLKISEDRLNFPSAERIDYLIGVLNNGSTTGD 529
Query: 540 KTRHSSTNYGDQESQG 587
+ +H TNY DQE G
Sbjct: 530 RVKHVETNYTDQERYG 545
>ref|XP_004294464.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 556
Score = 238 bits (606), Expect = 1e-60
Identities = 113/196 (57%), Positives = 149/196 (76%), Gaps = 1/196 (0%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
F+E+DVSNYF +FGPV+DVRIPCQ KRMFGFVTFV+ +TV +IL+KGNPHF+CGARVLVK
Sbjct: 342 FSEDDVSNYFNTFGPVEDVRIPCQPKRMFGFVTFVHADTVTMILSKGNPHFVCGARVLVK 401
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSHL-DMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKS+L +RK+ E EP +Y H DMEP+FHS+ + NSR +RK+ +EEQE
Sbjct: 402 PYREKSKLA-ERKYQERMEPADHYSPHFSDMEPEFHSMSRCYNNSRWLRKKLLEEQEIAL 460
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSDE 539
E+ER L++LH P+A+QPY GY MD +SE + P + F +L+DV+N+ STSD+
Sbjct: 461 ELERSRLAQLHFTRIPVANQPYSGYVMDGRMVSEDNFNFPPAECFDFLLDVINNGSTSDD 520
Query: 540 KTRHSSTNYGDQESQG 587
K +H+ TNY DQ+SQG
Sbjct: 521 KPKHTGTNYTDQDSQG 536
>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 554
Score = 236 bits (601), Expect = 5e-60
Identities = 121/195 (62%), Positives = 146/195 (74%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTFV+ ETVK IL+KGNPH +CGARVLVK
Sbjct: 338 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGARVLVK 397
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSH-LDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSRLV DRK+AE + +Y H +D + + HS+ NSRL+RKQ +EE EQ
Sbjct: 398 PYREKSRLV-DRKYAEKIQHPFFYSQHFIDGDSELHSVPRVCDNSRLLRKQLMEEHEQAL 456
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGH-NELPSMDRFSYLIDVLNSASTSD 536
E+ER LSE LA KPLA Y G+SMDE KLSE ++ PS + F+Y DVLN+ STS+
Sbjct: 457 ELERRRLSEFQLAPKPLARHAYHGHSMDEFKLSEEQADQFPSAEHFNYWFDVLNNGSTSE 516
Query: 537 EKTRHSSTNYGDQES 581
EK RH+ TN +Q+S
Sbjct: 517 EKHRHTRTNCSEQDS 531
>ref|XP_007020605.1| RNA binding protein, putative isoform 2 [Theobroma cacao]
gi|508720233|gb|EOY12130.1| RNA binding protein,
putative isoform 2 [Theobroma cacao]
Length = 569
Score = 234 bits (598), Expect = 1e-59
Identities = 116/196 (59%), Positives = 148/196 (75%), Gaps = 1/196 (0%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF ++G V+DVRIPCQQKRMFGFVTFV +TVK+ILAKGNPH++CGARVLVK
Sbjct: 356 FTEDDVSNYFSNYGQVEDVRIPCQQKRMFGFVTFVSADTVKMILAKGNPHYVCGARVLVK 415
Query: 183 PYKEKSRLVIDRKHAENTE-PLVYYPSHLDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKS+LV RK+ + E P+ Y P ++DMEP+ HS+ G+ SRL RKQFIE+ EQ
Sbjct: 416 PYREKSKLVDSRKYQDRIESPMYYSPHYIDMEPELHSIPRGYAMSRLFRKQFIEDPEQIF 475
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSDE 539
E+ER E+H+ K AHQ YFGYSMD LK+SE PS + F+YL++ N+++ SDE
Sbjct: 476 ELERRRPLEMHMTQKSQAHQSYFGYSMDGLKVSEDQLNFPSTE-FNYLMEAFNTSAASDE 534
Query: 540 KTRHSSTNYGDQESQG 587
K + TN DQES+G
Sbjct: 535 KIKRLETN-TDQESEG 549
>ref|XP_007020604.1| RNA binding protein, putative isoform 1 [Theobroma cacao]
gi|508720232|gb|EOY12129.1| RNA binding protein,
putative isoform 1 [Theobroma cacao]
Length = 568
Score = 233 bits (595), Expect = 2e-59
Identities = 117/196 (59%), Positives = 149/196 (76%), Gaps = 1/196 (0%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF ++G V+DVRIPCQQKRMFGFVTFV +TVK+ILAKGNPH++CGARVLVK
Sbjct: 356 FTEDDVSNYFSNYGQVEDVRIPCQQKRMFGFVTFVSADTVKMILAKGNPHYVCGARVLVK 415
Query: 183 PYKEKSRLVIDRKHAENTE-PLVYYPSHLDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKS+LV DRK+ + E P+ Y P ++DMEP+ HS+ G+ SRL RKQFIE+ EQ
Sbjct: 416 PYREKSKLV-DRKYQDRIESPMYYSPHYIDMEPELHSIPRGYAMSRLFRKQFIEDPEQIF 474
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSDE 539
E+ER E+H+ K AHQ YFGYSMD LK+SE PS + F+YL++ N+++ SDE
Sbjct: 475 ELERRRPLEMHMTQKSQAHQSYFGYSMDGLKVSEDQLNFPSTE-FNYLMEAFNTSAASDE 533
Query: 540 KTRHSSTNYGDQESQG 587
K + TN DQES+G
Sbjct: 534 KIKRLETN-TDQESEG 548
>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 557
Score = 230 bits (587), Expect = 2e-58
Identities = 118/195 (60%), Positives = 145/195 (74%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTFVYPETV+ IL+KGNPHF+CGARVLVK
Sbjct: 341 FTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYPETVRQILSKGNPHFVCGARVLVK 400
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSH-LDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSRLV DRK AE H +D + +FHSL +G R +RK + + E+
Sbjct: 401 PYREKSRLV-DRKFAEKMLHASCCDQHFMDGDSEFHSLPRDYGKPRFLRKHLMLDNEEGF 459
Query: 360 EIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSDE 539
+++R SE++L AKP +H+ Y+GYSMDELKL E E P +RFSYL+DVLN+ASTS+E
Sbjct: 460 KLDRRCFSEMNLTAKPSSHRSYYGYSMDELKLPEEQAEFPYAERFSYLLDVLNNASTSEE 519
Query: 540 KTR-HSSTNYGDQES 581
K H ST +Q+S
Sbjct: 520 KELVHISTKCNEQDS 534
>ref|XP_007049317.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
gi|590712174|ref|XP_007049318.1| CCCH-type zinc
fingerfamily protein with RNA-binding domain, putative
isoform 1 [Theobroma cacao]
gi|590712177|ref|XP_007049319.1| CCCH-type zinc
fingerfamily protein with RNA-binding domain, putative
isoform 1 [Theobroma cacao] gi|508701578|gb|EOX93474.1|
CCCH-type zinc fingerfamily protein with RNA-binding
domain, putative isoform 1 [Theobroma cacao]
gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 1
[Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
Length = 545
Score = 221 bits (563), Expect = 1e-55
Identities = 115/183 (62%), Positives = 136/183 (74%), Gaps = 2/183 (1%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTEEDVSNYF FGPVQDVRIPCQQKRMFGFVTFVY ETVK ILAKGNPHF+CGARVLVK
Sbjct: 362 FTEEDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYAETVKQILAKGNPHFVCGARVLVK 421
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSHL-DMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSR V+DRK E + +YY HL D + + S+ NSRL+RKQ IE+ EQ
Sbjct: 422 PYREKSR-VVDRKFTEKVQQPMYYSPHLIDGDTELQSMPRVCDNSRLLRKQIIEDNEQVL 480
Query: 360 EIERMHLSELHLAAKP-LAHQPYFGYSMDELKLSEGHNELPSMDRFSYLIDVLNSASTSD 536
E E+ SEL LA K L + YFGYSMDELK ++ E PS +R++YL+DVLN+ S S
Sbjct: 481 EFEKRRFSELQLAPKQHLTNHSYFGYSMDELKHTDEQVEFPSAERYNYLLDVLNTGSASG 540
Query: 537 EKT 545
+K+
Sbjct: 541 KKS 543
>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 566
Score = 218 bits (556), Expect = 7e-55
Identities = 115/203 (56%), Positives = 146/203 (71%), Gaps = 8/203 (3%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF +GPVQDVRIPCQQKRMFGFVTF+Y +TV+ IL+KGNPHF+CGARVLVK
Sbjct: 349 FTEQDVSNYFNKYGPVQDVRIPCQQKRMFGFVTFLYADTVRHILSKGNPHFVCGARVLVK 408
Query: 183 PYKEKSRLVIDRKHAENTEPLVYYPSH-LDMEPDFHSLVSGFGNSRLIRKQFIEEQEQDT 359
PY+EKSR +DRK ++ + + SH +D + D HS+ +SRL+RKQFIEE +Q
Sbjct: 409 PYREKSR-PVDRKFSDKMQHSPCFNSHYIDADADLHSMPRICDSSRLLRKQFIEEHQQVL 467
Query: 360 EIERMHLSELHLAAKPLAHQP--YFGYSMDELKLSEGH---NELPSMDRFSYLIDVLNSA 524
E ER SE+HLAAKPL+H Y+GYSMD+ K E + E P F+ L+D N+A
Sbjct: 468 ECERRRRSEMHLAAKPLSHHHHLYYGYSMDDFKHPEANADQAEFPYAKEFNILLDAWNNA 527
Query: 525 STSDEKTRHSSTNYGDQE--SQG 587
S S++K RH +TNY D + SQG
Sbjct: 528 SISEDKIRHINTNYTDHQDSSQG 550
>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 206 bits (525), Expect = 3e-51
Identities = 117/201 (58%), Positives = 139/201 (69%), Gaps = 8/201 (3%)
Frame = +3
Query: 3 FTEEDVSNYFKSFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAKGNPHFICGARVLVK 182
FTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTFV+ ETVK IL KGNPH+ICGARVLVK
Sbjct: 313 FTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLVK 372
Query: 183 PYKEK--SRLVIDRKHAENTEPLVYYPSHLDMEPDFHSLVSGFGNSRLIRK-QFIEEQEQ 353
PY+EK SR V R+H P+ Y P +D + + S+ NSRL+RK Q +EE EQ
Sbjct: 373 PYREKASSRTVDRRQH-----PMYYSPHFIDEDSELQSIPRVCDNSRLLRKQQLMEEHEQ 427
Query: 354 DTEIERMHLSELHLAAKPLAHQPYFGYSMDELKLSEG-----HNELPSMDRFSYLIDVLN 518
E+ER LSEL L K AH PYFGYSMDE K E PS +R +YL++VLN
Sbjct: 428 ALELERRRLSELQLTPK-TAH-PYFGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLEVLN 485
Query: 519 SASTSDEKTRHSSTNYGDQES 581
+ STS+++ STNY +QES
Sbjct: 486 NGSTSEDR----STNYNEQES 502