BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00034554
         (539 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001294301.1| cytochrome b6/f complex subunit IV [Illicium...   133   2e-29
ref|YP_740681.1| cytochrome b6/f complex subunit IV [Nandina dom...   127   2e-27
ref|YP_740596.1| cytochrome b6/f complex subunit IV [Platanus oc...   126   3e-27
ref|YP_008592671.1| cytochrome b6/f complex subunit IV (chloropl...   125   5e-27
gb|AHH24304.1| cytochrome b6/f complex subunit D (chloroplast) [...   125   7e-27
gb|AFA26986.1| cytochrome b6/f complex subunit IV, partial [Neoa...   125   7e-27
gb|AEZ01455.1| cytochrome b6/f complex subunit IV, partial (chlo...   125   7e-27
gb|AFU95128.1| PetD, partial (chloroplast) [Ploiarium sp. CCD-2012]   125   9e-27
gb|AFA26970.1| cytochrome b6/f complex subunit IV, partial [Moli...   125   9e-27
gb|AFU95130.1| PetD, partial (chloroplast) [Drypetes roxburghii]      124   1e-26
gb|AFU95107.1| PetD, partial (chloroplast) [Balanops pachyphylla...   124   1e-26
gb|AFA26988.1| cytochrome b6/f complex subunit IV, partial [Noli...   124   1e-26
ref|YP_001718468.1| cytochrome b6/f complex subunit IV [Manihot ...   124   1e-26
ref|YP_001294129.1| cytochrome b6/f complex subunit IV [Chlorant...   124   1e-26
ref|YP_007475992.1| cytochrome b6/f complex subunit IV [Bismarck...   124   2e-26
ref|YP_007475820.1| cytochrome b6/f complex subunit IV [Pseudoph...   124   2e-26
gb|AFA26979.1| cytochrome b6/f complex subunit IV, partial [Host...   124   2e-26
ref|YP_003778189.1| cytochrome b6-f complex subunit IV [Phoenix ...   124   2e-26
ref|YP_003540962.1| cytochrome b6-f complex subunit IV [Phoenix ...   124   2e-26
ref|YP_008081396.1| cytochrome b6/f complex subunit IV (chloropl...   124   2e-26

>ref|YP_001294301.1| cytochrome b6/f complex subunit IV [Illicium oligandrum]
           gi|147917425|gb|ABQ52549.1| cytochrome b6/f complex
           subunit IV [Illicium oligandrum]
          Length = 177

 Score =  133 bits (335), Expect = 2e-29
 Identities = 68/75 (90%), Positives = 69/75 (92%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFL+GTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 103 SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLLGTAVALWLGIGATLPIDKSLTLGLFQI 162

Query: 358 DSTVK*NTTTYVSRE 314
           DSTVK    TYVSRE
Sbjct: 163 DSTVKYQGITYVSRE 177


>ref|YP_740681.1| cytochrome b6/f complex subunit IV [Nandina domestica]
           gi|114054502|gb|ABI49895.1| cytochrome b6/f complex
           subunit IV [Nandina domestica]
          Length = 167

 Score =  127 bits (318), Expect = 2e-27
 Identities = 64/65 (98%), Positives = 64/65 (98%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 103 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 162

Query: 358 DSTVK 344
           DSTVK
Sbjct: 163 DSTVK 167


>ref|YP_740596.1| cytochrome b6/f complex subunit IV [Platanus occidentalis]
           gi|114054416|gb|ABI49810.1| cytochrome b6/f complex
           subunit IV [Platanus occidentalis]
          Length = 167

 Score =  126 bits (317), Expect = 3e-27
 Identities = 63/65 (96%), Positives = 64/65 (98%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 103 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 162

Query: 358 DSTVK 344
           DST+K
Sbjct: 163 DSTIK 167


>ref|YP_008592671.1| cytochrome b6/f complex subunit IV (chloroplast) [Berberis bealei]
           gi|552546167|ref|YP_008592717.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Berberis bealei]
           gi|536462712|gb|AGU37077.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Berberis bealei]
           gi|536462758|gb|AGU37123.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Berberis bealei]
          Length = 181

 Score =  125 bits (315), Expect = 5e-27
 Identities = 63/65 (96%), Positives = 64/65 (98%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 117 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 176

Query: 358 DSTVK 344
           DST+K
Sbjct: 177 DSTMK 181


>gb|AHH24304.1| cytochrome b6/f complex subunit D (chloroplast) [Japonolirion
           osense]
          Length = 174

 Score =  125 bits (314), Expect = 7e-27
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 104 SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 163

Query: 358 DSTVK 344
           DSTVK
Sbjct: 164 DSTVK 168


>gb|AFA26986.1| cytochrome b6/f complex subunit IV, partial [Neoastelia
           spectabilis]
          Length = 165

 Score =  125 bits (314), Expect = 7e-27
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 101 SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 160

Query: 358 DSTVK 344
           DSTVK
Sbjct: 161 DSTVK 165


>gb|AEZ01455.1| cytochrome b6/f complex subunit IV, partial (chloroplast)
           [Japonolirion osense]
          Length = 173

 Score =  125 bits (314), Expect = 7e-27
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 103 SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 162

Query: 358 DSTVK 344
           DSTVK
Sbjct: 163 DSTVK 167


>gb|AFU95128.1| PetD, partial (chloroplast) [Ploiarium sp. CCD-2012]
          Length = 164

 Score =  125 bits (313), Expect = 9e-27
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 100 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 159

Query: 358 DSTVK 344
           DS VK
Sbjct: 160 DSVVK 164


>gb|AFA26970.1| cytochrome b6/f complex subunit IV, partial [Molineria capitulata]
          Length = 171

 Score =  125 bits (313), Expect = 9e-27
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 101 SVPMGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 160

Query: 358 DSTVK 344
           DSTVK
Sbjct: 161 DSTVK 165


>gb|AFU95130.1| PetD, partial (chloroplast) [Drypetes roxburghii]
          Length = 164

 Score =  124 bits (312), Expect = 1e-26
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 100 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 159

Query: 358 DSTVK 344
           DS VK
Sbjct: 160 DSIVK 164


>gb|AFU95107.1| PetD, partial (chloroplast) [Balanops pachyphylla]
           gi|408900699|gb|AFU95117.1| PetD, partial (chloroplast)
           [Galearia maingayi]
          Length = 164

 Score =  124 bits (312), Expect = 1e-26
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 100 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 159

Query: 358 DSTVK 344
           DS VK
Sbjct: 160 DSIVK 164


>gb|AFA26988.1| cytochrome b6/f complex subunit IV, partial [Nolina atopocarpa]
          Length = 165

 Score =  124 bits (312), Expect = 1e-26
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 101 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 160

Query: 358 DSTVK 344
           DS VK
Sbjct: 161 DSIVK 165


>ref|YP_001718468.1| cytochrome b6/f complex subunit IV [Manihot esculenta]
           gi|225544154|ref|YP_002720143.1| petD [Jatropha curcas]
           gi|326909423|ref|YP_004327693.1| cytochrome b6/f complex
           subunit IV [Hevea brasiliensis]
           gi|568244940|ref|YP_008963722.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Liquidambar formosana]
           gi|157695916|gb|ABV66185.1| cytochrome b6/f complex
           subunit IV [Manihot esculenta]
           gi|224979595|gb|ACN72722.1| petD [Jatropha curcas]
           gi|290489368|gb|ADD31068.1| cytochrome b6/f complex
           subunit IV protein [Heuchera sanguinea]
           gi|290489370|gb|ADD31069.1| cytochrome b6/f complex
           subunit IV protein [Liquidambar styraciflua]
           gi|308523537|gb|ADO33587.1| cytochrome b6/f complex
           subunit IV [Hevea brasiliensis]
           gi|491650401|gb|AGL13461.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Liquidambar formosana]
          Length = 167

 Score =  124 bits (312), Expect = 1e-26
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 103 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 162

Query: 358 DSTVK 344
           DS VK
Sbjct: 163 DSIVK 167


>ref|YP_001294129.1| cytochrome b6/f complex subunit IV [Chloranthus spicatus]
           gi|146744218|gb|ABQ43290.1| cytochrome b6/f complex
           subunit IV [Chloranthus spicatus]
          Length = 173

 Score =  124 bits (311), Expect = 1e-26
 Identities = 62/65 (95%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 103 SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 162

Query: 358 DSTVK 344
           DST+K
Sbjct: 163 DSTMK 167


>ref|YP_007475992.1| cytochrome b6/f complex subunit IV [Bismarckia nobilis]
           gi|449326474|gb|AGE93056.1| cytochrome b6/f complex
           subunit IV [Bismarckia nobilis]
          Length = 173

 Score =  124 bits (310), Expect = 2e-26
 Identities = 62/65 (95%), Positives = 62/65 (95%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFLIGT VALWLGIGATLPIDKSLTLGLF I
Sbjct: 103 SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQI 162

Query: 358 DSTVK 344
           DSTVK
Sbjct: 163 DSTVK 167


>ref|YP_007475820.1| cytochrome b6/f complex subunit IV [Pseudophoenix vinifera]
           gi|449326300|gb|AGE92884.1| cytochrome b6/f complex
           subunit IV [Pseudophoenix vinifera]
          Length = 173

 Score =  124 bits (310), Expect = 2e-26
 Identities = 62/65 (95%), Positives = 62/65 (95%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFLIGT VALWLGIGATLPIDKSLTLGLF I
Sbjct: 103 SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQI 162

Query: 358 DSTVK 344
           DSTVK
Sbjct: 163 DSTVK 167


>gb|AFA26979.1| cytochrome b6/f complex subunit IV, partial [Hosta ventricosa]
           gi|374973780|gb|AFA26990.1| cytochrome b6/f complex
           subunit IV, partial [Phormium tenax]
          Length = 165

 Score =  124 bits (310), Expect = 2e-26
 Identities = 62/65 (95%), Positives = 62/65 (95%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF I
Sbjct: 101 SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 160

Query: 358 DSTVK 344
           DST K
Sbjct: 161 DSTAK 165


>ref|YP_003778189.1| cytochrome b6-f complex subunit IV [Phoenix dactylifera]
           gi|299033936|gb|ADD63201.2| cytochrome b6-f complex
           subunit IV (chloroplast) [Phoenix dactylifera]
          Length = 173

 Score =  124 bits (310), Expect = 2e-26
 Identities = 62/65 (95%), Positives = 62/65 (95%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFLIGT VALWLGIGATLPIDKSLTLGLF I
Sbjct: 103 SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQI 162

Query: 358 DSTVK 344
           DSTVK
Sbjct: 163 DSTVK 167


>ref|YP_003540962.1| cytochrome b6-f complex subunit IV [Phoenix dactylifera]
           gi|294620608|gb|ADF28177.1| cytochrome b6-f complex
           subunit IV (chloroplast) [Phoenix dactylifera]
          Length = 187

 Score =  124 bits (310), Expect = 2e-26
 Identities = 62/65 (95%), Positives = 62/65 (95%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVP GLLTVPFLENVNKFQNPFRRPVATTVFLIGT VALWLGIGATLPIDKSLTLGLF I
Sbjct: 117 SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQI 176

Query: 358 DSTVK 344
           DSTVK
Sbjct: 177 DSTVK 181


>ref|YP_008081396.1| cytochrome b6/f complex subunit IV (chloroplast) [Tetracentron
           sinense] gi|511348562|ref|YP_008081488.1| cytochrome
           b6/f complex subunit IV (chloroplast) [Trochodendron
           aralioides] gi|290489380|gb|ADD31074.1| cytochrome b6/f
           complex subunit IV protein [Trochodendron aralioides]
           gi|479279234|gb|AGJ72088.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Tetracentron sinense]
           gi|479279327|gb|AGJ72180.1| cytochrome b6/f complex
           subunit IV (chloroplast) [Trochodendron aralioides]
          Length = 167

 Score =  124 bits (310), Expect = 2e-26
 Identities = 62/65 (95%), Positives = 63/65 (96%)
 Frame = -2

Query: 538 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*I 359
           SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGT VALWLGIGATLPIDKSLTLGLF I
Sbjct: 103 SVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQI 162

Query: 358 DSTVK 344
           DS+VK
Sbjct: 163 DSSVK 167