BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00034537
         (540 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              303   2e-80
gb|AAD17351.1| contains similarity to retrovirus-related polypro...   303   2e-80
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         295   6e-78
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   294   1e-77
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594...   293   2e-77
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664...   290   2e-76
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  289   3e-76
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  289   3e-76
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662...   288   6e-76
dbj|BAH80072.1| putative unclassified retrotransposon protein [O...   288   8e-76
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni...   288   8e-76
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]        288   8e-76
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc...   287   1e-75
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   287   1e-75
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]        287   1e-75
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...   287   1e-75
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             286   2e-75
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]                286   2e-75
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]        286   2e-75
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        285   5e-75

>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  303 bits (776), Expect = 2e-80
 Identities = 144/179 (80%), Positives = 161/179 (89%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            KSV EVRSFHGLA FYRRFVKDFSTLA+PLTEVIKK+VGF W +AQE AF  LKEKL  A
Sbjct: 1135 KSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKEKLTHA 1194

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            P+L+LP+F K FEIECDASG+GIG VLMQD KP+AYFSEKL GA LNYPTYDKELYALVR
Sbjct: 1195 PVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVR 1254

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
            AL+T QHYLWPKEFVIHTDHESL+HLK Q KL++RHA+W+EFIETFPYVIKYKKG++N+
Sbjct: 1255 ALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNV 1313


>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
            zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
            E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
            putative polyprotein [Arabidopsis thaliana]
          Length = 1138

 Score =  303 bits (775), Expect = 2e-80
 Identities = 142/179 (79%), Positives = 161/179 (89%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            KSV +VRSFHGLA FYRRFV+DFSTLA+PLTEVIKK+VGF W +A E AF  LKEKL  A
Sbjct: 554  KSVGKVRSFHGLAGFYRRFVRDFSTLAAPLTEVIKKNVGFKWEQAPEDAFQALKEKLTHA 613

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            P+L+LP+F K FEIECDA G+GIGAVLMQD KP+AYFSEKL GA LNYPTYDKELYALVR
Sbjct: 614  PVLSLPDFLKTFEIECDAPGVGIGAVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVR 673

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
            AL+TWQHYLWPKEFVIHTDHESL+HLK Q KL++RHA+W+EFIETFPYVIKYKKG++N+
Sbjct: 674  ALQTWQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNV 732


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  295 bits (754), Expect = 6e-78
 Identities = 135/179 (75%), Positives = 162/179 (90%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K++++VRSF GLA FYRRFVKDFST+A+PL E+ KK V F WGK QE AFN+LK+KL  A
Sbjct: 946  KTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVLKDKLTHA 1005

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LP+F+K FE+ECDASGIG+G VL+Q+GKP+AYFSEKL+G+ LNY TYDKELYALVR
Sbjct: 1006 PLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNYSTYDKELYALVR 1065

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H++SQGKL+RRHAKW+EFIE+FPYVIK+KKG+ENI
Sbjct: 1066 TLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1124


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  294 bits (752), Expect = 1e-77
 Identities = 136/179 (75%), Positives = 159/179 (88%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+V++VRSF GLA FYRRFV+DFST+A+PL EV KK V F WG AQE+AF +LK+KL  A
Sbjct: 987  KTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVWGTAQEEAFTVLKDKLTYA 1046

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LPNF+K FE+ECDASGIG+G VL+QDGKP+AYFSEK +G  LNY TYDKELYALVR
Sbjct: 1047 PLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKFSGPSLNYSTYDKELYALVR 1106

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H+KSQ KL+RRHAKW+EFIETFPYVIK+KKG+EN+
Sbjct: 1107 TLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKGKENV 1165


>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
          Length = 1191

 Score =  293 bits (749), Expect = 2e-77
 Identities = 140/178 (78%), Positives = 159/178 (89%)
 Frame = +2

Query: 5    SVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTAP 184
            SV+EVRSFH LASFYRRFV+DFST+A+PLTEVIKK   F WGK Q+ AFNLLK+KLC+AP
Sbjct: 655  SVTEVRSFHRLASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAP 714

Query: 185  LLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVRA 364
            LL L +FSK FE+ECDASG GIGAVLM D KP+AYFSEK +GA LNY TYDKELYALVRA
Sbjct: 715  LLQLLDFSKSFEVECDASGKGIGAVLMPDSKPIAYFSEKPSGATLNYLTYDKELYALVRA 774

Query: 365  LETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
            L TWQHYLWP+EFV+ TDHESL++LKSQGKLSRRHAKW+EFIETFPYVI YK+G+EN+
Sbjct: 775  LATWQHYLWPREFVVKTDHESLKYLKSQGKLSRRHAKWVEFIETFPYVIAYKQGKENV 832


>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
          Length = 1176

 Score =  290 bits (741), Expect = 2e-76
 Identities = 134/179 (74%), Positives = 160/179 (89%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K++SEVR FHGLASFYRRFVKDFSTLA+PLTEV+KK+VGF WGK QE+AF  LK +L  A
Sbjct: 585  KTLSEVRGFHGLASFYRRFVKDFSTLAAPLTEVVKKNVGFKWGKKQEEAFAALKHRLTNA 644

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            P+LA+PNF+K FEIECDAS +GIGAVL+Q+G P+AYFSEKL  A LNY TYDKELYALVR
Sbjct: 645  PILAMPNFAKSFEIECDASNVGIGAVLLQEGHPIAYFSEKLGAAALNYSTYDKELYALVR 704

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
            AL+TWQHYL PKEFVIH+DHESL++LK QGKL++RHAKW+EF+E FPYVIK+KKG+ ++
Sbjct: 705  ALQTWQHYLLPKEFVIHSDHESLKYLKGQGKLNKRHAKWVEFLEQFPYVIKHKKGKGDV 763


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  289 bits (739), Expect = 3e-76
 Identities = 132/179 (73%), Positives = 159/179 (88%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+V++VRSF G A FYRRFV+DFST+A+PL E+ KK V + WG AQE+AF +LK+KL  A
Sbjct: 1002 KTVTQVRSFLGXAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTVLKDKLTHA 1061

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LP+F+K FE+ECDASGIG+G VL+QDGKP+AYFSEKL+G  LNY TYDKELYALVR
Sbjct: 1062 PLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGPSLNYSTYDKELYALVR 1121

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H+KSQ KL+RRHAKW+EFIETFPYVIK+KKG++N+
Sbjct: 1122 TLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKGKDNV 1180


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  289 bits (739), Expect = 3e-76
 Identities = 133/179 (74%), Positives = 159/179 (88%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+V++VRSF GLA FYRRFV+DFST+A+PL E+ KK V + WG AQE+AF +LK+KL  A
Sbjct: 999  KTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTVLKDKLTHA 1058

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LP+F+K FE+ECDASGIG+G VL+QDGKP+AYFSEKL+G  LNY TYDKELYALVR
Sbjct: 1059 PLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGPSLNYSTYDKELYALVR 1118

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H+KSQ KL+RRHAKW+EFIETFPYVIK KKG++N+
Sbjct: 1119 TLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKDKKGKDNV 1177


>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
          Length = 612

 Score =  288 bits (737), Expect = 6e-76
 Identities = 132/179 (73%), Positives = 159/179 (88%)
 Frame = +2

Query: 2   KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
           K++SEVR FHGLASFYRRFVKDFSTLA+PLTE++KK+VGF WGK QE+AF  LK +L  A
Sbjct: 106 KTLSEVRGFHGLASFYRRFVKDFSTLAAPLTEIVKKNVGFKWGKKQEEAFAALKHRLTNA 165

Query: 182 PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
           P+LA+PNF+K FEIECD S +GIGAVL+Q+G P+AYFSEKL  A LNY TYDK+LYALVR
Sbjct: 166 PILAMPNFAKSFEIECDVSNVGIGAVLLQEGHPIAYFSEKLGAAALNYSTYDKKLYALVR 225

Query: 362 ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
           AL+TWQHYL PKEFVIH+DHESL++LK QGKL++RHAKW+EF+E FPYVIK+KKG+ N+
Sbjct: 226 ALQTWQHYLLPKEFVIHSDHESLKYLKGQGKLNKRHAKWVEFLEQFPYVIKHKKGKGNV 284


>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
           Group]
          Length = 848

 Score =  288 bits (736), Expect = 8e-76
 Identities = 133/179 (74%), Positives = 160/179 (89%)
 Frame = +2

Query: 2   KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
           K+VS+VRSF GLA FYRRFV+DFST+A+PL  + KK V F WG +QE AF++LK+KL  A
Sbjct: 307 KTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 366

Query: 182 PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
           PLL LP+F+K FE+ECDASGIG+G VL+Q+GKP+AYFSEKL+G  LNY TYDKELYALVR
Sbjct: 367 PLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVR 426

Query: 362 ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
            LETWQHYLWPKEFVIH+DHESL+H++SQGKL+RRHAKW+EFIE+FPYVIK+KKG+ENI
Sbjct: 427 TLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 485


>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1234

 Score =  288 bits (736), Expect = 8e-76
 Identities = 133/179 (74%), Positives = 160/179 (89%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+VS+VRSF GLA FYRRFV+DFST+A+PL  + KK V F WG +QE AF++LK+KL  A
Sbjct: 759  KTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 818

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LP+F+K FE+ECDASGIG+G VL+Q+GKP+AYFSEKL+G  LNY TYDKELYALVR
Sbjct: 819  PLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVR 878

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H++SQGKL+RRHAKW+EFIE+FPYVIK+KKG+ENI
Sbjct: 879  TLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 937


>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
          Length = 2388

 Score =  288 bits (736), Expect = 8e-76
 Identities = 133/179 (74%), Positives = 160/179 (89%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+VS+VRSF GLA FYRRFV+DFST+A+PL  + KK V F WG +QE AF++LK+KL  A
Sbjct: 779  KTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 838

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LP+F+K FE+ECDASGIG+G VL+Q+GKP+AYFSEKL+G  LNY TYDKELYALVR
Sbjct: 839  PLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGLVLNYSTYDKELYALVR 898

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H++SQGKL+RRHAKW+EFIE+FPYVIK+KKG+ENI
Sbjct: 899  TLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 957



 Score =  167 bits (424), Expect = 1e-39
 Identities = 82/179 (45%), Positives = 121/179 (67%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+V+++RSF GLA +YRRF+++FS +A P+T+++KK   F W    E+AF  LKEKL ++
Sbjct: 1710 KTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSS 1769

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            P+L LP+  K F + CDAS  G+G VLMQDG  +AY S +L     NYPT+D EL A+V 
Sbjct: 1770 PVLILPDTRKDFMVYCDASRQGLGCVLMQDGHVVAYASRQLWPHEGNYPTHDLELAAVVH 1829

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
            AL+ W+HYL      I+TDH+SL+++ +Q  L+ R  +W+E I+ +   I Y  G+ N+
Sbjct: 1830 ALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANV 1888


>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 817

 Score =  287 bits (735), Expect = 1e-75
 Identities = 133/179 (74%), Positives = 160/179 (89%)
 Frame = +2

Query: 2   KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
           K+VS+VRSF GLA FYRRFV+DFST+A+PL  + KK V F WG +QE AF++LK+KL  A
Sbjct: 276 KTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKVVPFTWGTSQENAFHMLKDKLTHA 335

Query: 182 PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
           PLL LPNF+K FE+ECDASGIG+G VL+Q+GKP+AYFSEKL+G  LNY TYDKELYALVR
Sbjct: 336 PLLQLPNFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVR 395

Query: 362 ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
            LETWQHYLWPK+FVIH+DHESL+H++SQGKL+RRHAKW+EFIE+FPYVIK+KKG+ENI
Sbjct: 396 TLETWQHYLWPKKFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 454


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  287 bits (735), Expect = 1e-75
 Identities = 133/179 (74%), Positives = 160/179 (89%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+VS+VRSF GLA FYRRFV+DFST+A+PL  + KK V F WG +QE AF++LK+KL  A
Sbjct: 943  KTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTHA 1002

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LP+F+K FE+ECDASGIG+G VL+Q+GKP+AYFSEKL+G  LNY TYDKELYALVR
Sbjct: 1003 PLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVR 1062

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H++SQGKL+RRHAKW+EFIE+FPYVIK+KKG+ENI
Sbjct: 1063 TLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1121



 Score =  166 bits (420), Expect = 3e-39
 Identities = 81/179 (45%), Positives = 121/179 (67%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+V+++RSF GLA +YRRF+++FS +A P+T+++KK   F W    E+AF  LKEKL ++
Sbjct: 1735 KTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSS 1794

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            P+L LP+  K F + CDAS  G+G VLMQ+G  +AY S +L     NYPT+D EL A+V 
Sbjct: 1795 PVLILPDTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVVH 1854

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
            AL+ W+HYL      I+TDH+SL+++ +Q  L+ R  +W+E I+ +   I Y  G+ N+
Sbjct: 1855 ALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANV 1913


>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score =  287 bits (735), Expect = 1e-75
 Identities = 133/179 (74%), Positives = 159/179 (88%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+VS+VRSF GLA FYRRFV+DFST+A+PL  + KK V F WG +QE AF++LK+KL  A
Sbjct: 888  KTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 947

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LP+F+K FE+ECDASGIG+G VL+Q+GKP+AYFSEKL G  LNY TYDKELYALVR
Sbjct: 948  PLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLTGPVLNYSTYDKELYALVR 1007

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H++SQGKL+RRHAKW+EFIE+FPYVIK+KKG+ENI
Sbjct: 1008 TLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1066


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score =  287 bits (734), Expect = 1e-75
 Identities = 136/179 (75%), Positives = 154/179 (86%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+V EVRSFHGLA FYRRF KDFST+ +PLTEV+KK VGF W KAQE+AF  LK+KL  A
Sbjct: 644  KTVGEVRSFHGLAGFYRRFFKDFSTIVAPLTEVMKKDVGFKWEKAQEEAFQSLKDKLTNA 703

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            P+L L  F K FEIECDASGIGIGAVLMQD K +A+FSEKL GA LNYPTYDKELYALVR
Sbjct: 704  PVLILSEFLKTFEIECDASGIGIGAVLMQDQKLIAFFSEKLGGATLNYPTYDKELYALVR 763

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
            AL+ WQHYLWPK FVIHTDHESL+HLK Q KL++RHA+W+EFIETF YVIKYKKG++N+
Sbjct: 764  ALQRWQHYLWPKVFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFAYVIKYKKGKDNV 822


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  286 bits (733), Expect = 2e-75
 Identities = 135/171 (78%), Positives = 153/171 (89%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+VSEVRSFHGLASFYRRFVKDFSTLA+PL E+++K VGF WG+ QEQAF  LKEKL  A
Sbjct: 833  KNVSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVEKDVGFKWGEKQEQAFAALKEKLTQA 892

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            P+LALPNFSK FEIECDAS +GIGAVL+Q+G PLAYFSEKL GA LNY TYDKELY+LVR
Sbjct: 893  PVLALPNFSKSFEIECDASNVGIGAVLLQEGHPLAYFSEKLKGAALNYSTYDKELYSLVR 952

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIK 514
            AL+TWQHYL PKEFVIH+DHESL+HLK QGKL++RH KW+EF+E FPYVIK
Sbjct: 953  ALQTWQHYLLPKEFVIHSDHESLKHLKGQGKLNKRHVKWVEFLEQFPYVIK 1003


>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
          Length = 1667

 Score =  286 bits (733), Expect = 2e-75
 Identities = 133/179 (74%), Positives = 159/179 (88%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+VS+VRSF GLA FYRRFV+DFST+A+PL  + KK V F WG +QE AF++LK+KL  A
Sbjct: 866  KTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 925

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LP+F+K FE+ECDASGIG+G VL+Q+GKP+AYFSEKL+G  LNY TYDKELYALVR
Sbjct: 926  PLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVR 985

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H+ SQGKL+RRHAKW+EFIE+FPYVIK+KKG+ENI
Sbjct: 986  TLETWQHYLWPKEFVIHSDHESLKHIHSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1044


>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
          Length = 1667

 Score =  286 bits (733), Expect = 2e-75
 Identities = 133/179 (74%), Positives = 159/179 (88%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+VS+VRSF GLA FYRRFV+DFST+A+PL  + KK V F WG +QE AF++LK+KL  A
Sbjct: 866  KTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 925

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LP+F+K FE+ECDASGIG+G VL+Q+GKP+AYFSEKL+G  LNY TYDKELYALVR
Sbjct: 926  PLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVR 985

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H+ SQGKL+RRHAKW+EFIE+FPYVIK+KKG+ENI
Sbjct: 986  TLETWQHYLWPKEFVIHSDHESLKHIHSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1044


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  285 bits (729), Expect = 5e-75
 Identities = 131/179 (73%), Positives = 159/179 (88%)
 Frame = +2

Query: 2    KSVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTA 181
            K+VS+VRSF GLA FYRRFV+DFST+A+PL  + KK V F WG +QE AF++LK+KL  A
Sbjct: 1037 KTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 1096

Query: 182  PLLALPNFSKIFEIECDASGIGIGAVLMQDGKPLAYFSEKLNGAHLNYPTYDKELYALVR 361
            PLL LP+F+K FE+ECDA+GIG+G V +Q+GKP+AYFSEKL+G  LNY TYDKELYALVR
Sbjct: 1097 PLLQLPDFNKTFELECDANGIGLGGVFLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVR 1156

Query: 362  ALETWQHYLWPKEFVIHTDHESLRHLKSQGKLSRRHAKWMEFIETFPYVIKYKKGEENI 538
             LETWQHYLWPKEFVIH+DHESL+H++SQGKL+RRHAKW+EFIE+FPYVIK+KKG+ENI
Sbjct: 1157 TLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1215



 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 40/88 (45%), Positives = 59/88 (67%)
 Frame = +2

Query: 5    SVSEVRSFHGLASFYRRFVKDFSTLASPLTEVIKKSVGFHWGKAQEQAFNLLKEKLCTAP 184
            ++  +RSF G A FYRRF+KDFST+A PLT ++ K   F +  A  ++F +LK+ L + P
Sbjct: 2135 NIKGIRSFLGHADFYRRFIKDFSTIARPLTNLLAKDTPFEFDDACLKSFEILKKALDSGP 2194

Query: 185  LLALPNFSKIFEIECDASGIGIGAVLMQ 268
            ++  P+++  FEI CDAS   +GAVL Q
Sbjct: 2195 IIQPPDWTLPFEIMCDASDFAVGAVLGQ 2222