BLASTX nr result
ID: Cocculus23_contig00032787
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00032787
(553 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI32371.3| unnamed protein product [Vitis vinifera] 136 3e-30
ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis v... 136 3e-30
ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h... 136 4e-30
gb|EXB39363.1| DNA repair helicase UVH6 [Morus notabilis] 133 3e-29
ref|XP_007050637.1| RAD3-like DNA-binding helicase protein isofo... 133 3e-29
ref|XP_007050635.1| RAD3-like DNA-binding helicase protein isofo... 133 3e-29
ref|XP_002300852.1| ULTRAVIOLET HYPERSENSITIVE 6 family protein ... 131 1e-28
ref|XP_006444090.1| hypothetical protein CICLE_v10018975mg [Citr... 129 4e-28
ref|XP_004290662.1| PREDICTED: DNA repair helicase UVH6-like [Fr... 129 6e-28
ref|XP_006418256.1| hypothetical protein EUTSA_v10006888mg [Eutr... 128 8e-28
ref|XP_006306808.1| hypothetical protein CARUB_v10008351mg [Caps... 128 8e-28
gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D... 128 8e-28
ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]... 128 8e-28
dbj|BAJ34374.1| unnamed protein product [Thellungiella halophila] 128 8e-28
ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arab... 128 8e-28
ref|XP_007198999.1| hypothetical protein PRUPE_ppa001835mg [Prun... 128 1e-27
ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ric... 127 1e-27
ref|XP_006850721.1| hypothetical protein AMTR_s00025p00038580 [A... 127 2e-27
gb|EYU46592.1| hypothetical protein MIMGU_mgv1a001802mg [Mimulus... 126 3e-27
gb|AFW57600.1| hypothetical protein ZEAMMB73_931460 [Zea mays] 126 4e-27
>emb|CBI32371.3| unnamed protein product [Vitis vinifera]
Length = 922
Score = 136 bits (343), Expect = 3e-30
Identities = 66/74 (89%), Positives = 68/74 (91%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG +KTLLS+
Sbjct: 847 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVSGRKTLLSE 906
Query: 373 EDLEKMGDGNFAEM 332
EDLEKMGDG EM
Sbjct: 907 EDLEKMGDGTTNEM 920
>ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
Length = 758
Score = 136 bits (343), Expect = 3e-30
Identities = 66/74 (89%), Positives = 68/74 (91%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG +KTLLS+
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVSGRKTLLSE 742
Query: 373 EDLEKMGDGNFAEM 332
EDLEKMGDG EM
Sbjct: 743 EDLEKMGDGTTNEM 756
>ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
[Cucumis sativus]
Length = 919
Score = 136 bits (342), Expect = 4e-30
Identities = 65/74 (87%), Positives = 68/74 (91%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG+ +KTLLSQ
Sbjct: 844 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSSGRKTLLSQ 903
Query: 373 EDLEKMGDGNFAEM 332
EDLEKM + N EM
Sbjct: 904 EDLEKMSEANMNEM 917
>gb|EXB39363.1| DNA repair helicase UVH6 [Morus notabilis]
Length = 758
Score = 133 bits (335), Expect = 3e-29
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG +KTLLSQ
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGGSGRKTLLSQ 742
Query: 373 EDLEKMGDGNFAEM 332
EDLEKMG+ EM
Sbjct: 743 EDLEKMGERIVDEM 756
>ref|XP_007050637.1| RAD3-like DNA-binding helicase protein isoform 3 [Theobroma cacao]
gi|508702898|gb|EOX94794.1| RAD3-like DNA-binding
helicase protein isoform 3 [Theobroma cacao]
Length = 758
Score = 133 bits (334), Expect = 3e-29
Identities = 64/74 (86%), Positives = 67/74 (90%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLP WILSHLRDA+LNLSTDMALHIAREFLRKMAQPYDK G +KTLLSQ
Sbjct: 683 RYSRHDKRSKLPSWILSHLRDANLNLSTDMALHIAREFLRKMAQPYDKTGGSDRKTLLSQ 742
Query: 373 EDLEKMGDGNFAEM 332
EDLEKMGDG+ EM
Sbjct: 743 EDLEKMGDGSVHEM 756
>ref|XP_007050635.1| RAD3-like DNA-binding helicase protein isoform 1 [Theobroma cacao]
gi|508702896|gb|EOX94792.1| RAD3-like DNA-binding
helicase protein isoform 1 [Theobroma cacao]
Length = 780
Score = 133 bits (334), Expect = 3e-29
Identities = 64/74 (86%), Positives = 67/74 (90%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLP WILSHLRDA+LNLSTDMALHIAREFLRKMAQPYDK G +KTLLSQ
Sbjct: 705 RYSRHDKRSKLPSWILSHLRDANLNLSTDMALHIAREFLRKMAQPYDKTGGSDRKTLLSQ 764
Query: 373 EDLEKMGDGNFAEM 332
EDLEKMGDG+ EM
Sbjct: 765 EDLEKMGDGSVHEM 778
>ref|XP_002300852.1| ULTRAVIOLET HYPERSENSITIVE 6 family protein [Populus trichocarpa]
gi|222842578|gb|EEE80125.1| ULTRAVIOLET HYPERSENSITIVE 6
family protein [Populus trichocarpa]
Length = 758
Score = 131 bits (330), Expect = 1e-28
Identities = 63/68 (92%), Positives = 64/68 (94%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK G+ KKTLLSQ
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGSSGKKTLLSQ 742
Query: 373 EDLEKMGD 350
EDLEKM D
Sbjct: 743 EDLEKMDD 750
>ref|XP_006444090.1| hypothetical protein CICLE_v10018975mg [Citrus clementina]
gi|568852134|ref|XP_006479735.1| PREDICTED: DNA repair
helicase UVH6-like [Citrus sinensis]
gi|557546352|gb|ESR57330.1| hypothetical protein
CICLE_v10018975mg [Citrus clementina]
Length = 759
Score = 129 bits (325), Expect = 4e-28
Identities = 65/75 (86%), Positives = 68/75 (90%), Gaps = 1/75 (1%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG+ +KTLLSQ
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQ 742
Query: 373 EDLEKM-GDGNFAEM 332
DLEKM DG+ EM
Sbjct: 743 ADLEKMTNDGSINEM 757
>ref|XP_004290662.1| PREDICTED: DNA repair helicase UVH6-like [Fragaria vesca subsp.
vesca]
Length = 759
Score = 129 bits (323), Expect = 6e-28
Identities = 64/75 (85%), Positives = 68/75 (90%), Gaps = 1/75 (1%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGS-KKTLLS 377
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK G+ S +KTLLS
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGSSSGRKTLLS 742
Query: 376 QEDLEKMGDGNFAEM 332
Q+DLE+MG G EM
Sbjct: 743 QDDLERMGQGITDEM 757
>ref|XP_006418256.1| hypothetical protein EUTSA_v10006888mg [Eutrema salsugineum]
gi|557096027|gb|ESQ36609.1| hypothetical protein
EUTSA_v10006888mg [Eutrema salsugineum]
Length = 758
Score = 128 bits (322), Expect = 8e-28
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG +KTLL+Q
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQ 742
Query: 373 EDLEKMGDGNFAEM 332
EDLEKM + +M
Sbjct: 743 EDLEKMAETGVQDM 756
>ref|XP_006306808.1| hypothetical protein CARUB_v10008351mg [Capsella rubella]
gi|482575519|gb|EOA39706.1| hypothetical protein
CARUB_v10008351mg [Capsella rubella]
Length = 786
Score = 128 bits (322), Expect = 8e-28
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG +KTLL+Q
Sbjct: 711 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQ 770
Query: 373 EDLEKMGDGNFAEM 332
EDLEKM + +M
Sbjct: 771 EDLEKMAETGVQDM 784
>gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D homolog [Arabidopsis
thaliana]
Length = 758
Score = 128 bits (322), Expect = 8e-28
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG +KTLL+Q
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQ 742
Query: 373 EDLEKMGDGNFAEM 332
EDLEKM + +M
Sbjct: 743 EDLEKMAETGVQDM 756
>ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
gi|30678494|ref|NP_849584.1| DNA repair helicase UVH6
[Arabidopsis thaliana]
gi|57013122|sp|Q8W4M7.1|ERCC2_ARATH RecName: Full=DNA
repair helicase UVH6; AltName: Full=ERCC2 homolog;
AltName: Full=RAD3 homolog; Short=AtUVH6; Short=AtXPD;
AltName: Full=UV hypersensitive protein 6; AltName:
Full=XPD homolog gi|17064790|gb|AAL32549.1| Strong
similarity to nucleotide excision repair protein
[Arabidopsis thaliana] gi|20258776|gb|AAM13910.1|
putative DNA repair protein [Arabidopsis thaliana]
gi|22651570|gb|AAM10793.1| DNA repair/transcription
factor protein [Arabidopsis thaliana]
gi|34098809|gb|AAQ56787.1| At1g03190 [Arabidopsis
thaliana] gi|332189421|gb|AEE27542.1| DNA repair
helicase UVH6 [Arabidopsis thaliana]
gi|332189422|gb|AEE27543.1| DNA repair helicase UVH6
[Arabidopsis thaliana]
Length = 758
Score = 128 bits (322), Expect = 8e-28
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG +KTLL+Q
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQ 742
Query: 373 EDLEKMGDGNFAEM 332
EDLEKM + +M
Sbjct: 743 EDLEKMAETGVQDM 756
>dbj|BAJ34374.1| unnamed protein product [Thellungiella halophila]
Length = 376
Score = 128 bits (322), Expect = 8e-28
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG +KTLL+Q
Sbjct: 301 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQ 360
Query: 373 EDLEKMGDGNFAEM 332
EDLEKM + +M
Sbjct: 361 EDLEKMAETGVQDM 374
>ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arabidopsis lyrata subsp.
lyrata] gi|297335286|gb|EFH65703.1| hypothetical protein
ARALYDRAFT_470299 [Arabidopsis lyrata subsp. lyrata]
Length = 758
Score = 128 bits (322), Expect = 8e-28
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG +KTLL+Q
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQ 742
Query: 373 EDLEKMGDGNFAEM 332
EDLEKM + +M
Sbjct: 743 EDLEKMAETGVQDM 756
>ref|XP_007198999.1| hypothetical protein PRUPE_ppa001835mg [Prunus persica]
gi|462394399|gb|EMJ00198.1| hypothetical protein
PRUPE_ppa001835mg [Prunus persica]
Length = 759
Score = 128 bits (321), Expect = 1e-27
Identities = 65/75 (86%), Positives = 68/75 (90%), Gaps = 1/75 (1%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGS-KKTLLS 377
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG+ S +KTLLS
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSVSGRKTLLS 742
Query: 376 QEDLEKMGDGNFAEM 332
QEDLE MG+ EM
Sbjct: 743 QEDLENMGESIADEM 757
>ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
gi|223540142|gb|EEF41719.1| DNA repair helicase
rad3/xp-d, putative [Ricinus communis]
Length = 758
Score = 127 bits (320), Expect = 1e-27
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDA+LNLSTDMALHIAREFLRKMAQPYDK G +KTLLSQ
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDANLNLSTDMALHIAREFLRKMAQPYDKTGASGRKTLLSQ 742
Query: 373 EDLEKMGDGNFAEM 332
EDLEKM + +M
Sbjct: 743 EDLEKMAESGMQDM 756
>ref|XP_006850721.1| hypothetical protein AMTR_s00025p00038580 [Amborella trichopoda]
gi|548854392|gb|ERN12302.1| hypothetical protein
AMTR_s00025p00038580 [Amborella trichopoda]
Length = 762
Score = 127 bits (318), Expect = 2e-27
Identities = 63/67 (94%), Positives = 64/67 (95%), Gaps = 1/67 (1%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGS-KKTLLS 377
RYSRHDKRSKLPGWILSHL DAHLNLSTDMALHIAREFLRKMAQPYDK+G GS KKTLLS
Sbjct: 688 RYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHIAREFLRKMAQPYDKSGGGSGKKTLLS 747
Query: 376 QEDLEKM 356
QEDLEKM
Sbjct: 748 QEDLEKM 754
>gb|EYU46592.1| hypothetical protein MIMGU_mgv1a001802mg [Mimulus guttatus]
Length = 757
Score = 126 bits (317), Expect = 3e-27
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA+EFLR+MAQPYDK G KKTLLSQ
Sbjct: 683 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAKEFLRRMAQPYDKTGAVGKKTLLSQ 742
Query: 373 EDLEKMGDG 347
EDLEKM +G
Sbjct: 743 EDLEKMVNG 751
>gb|AFW57600.1| hypothetical protein ZEAMMB73_931460 [Zea mays]
Length = 194
Score = 126 bits (316), Expect = 4e-27
Identities = 59/72 (81%), Positives = 64/72 (88%)
Frame = -1
Query: 553 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGNGSKKTLLSQ 374
RYSRHDKRSKLPGWILSHL DAHLNLSTDMALHIAREFLR+MAQPYDKAG+G KKTLL++
Sbjct: 122 RYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHIAREFLRRMAQPYDKAGSGGKKTLLTE 181
Query: 373 EDLEKMGDGNFA 338
EDLE + A
Sbjct: 182 EDLENLAQDGMA 193