BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00032656
         (250 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Popu...   112   7e-23
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ...   103   3e-20
gb|EXB53573.1| hypothetical protein L484_009313 [Morus notabilis]     102   4e-20
ref|XP_007216509.1| hypothetical protein PRUPE_ppa025580mg, part...   102   4e-20
ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containi...   102   5e-20
ref|NP_188854.1| pentatricopeptide repeat-containing protein [Ar...   101   9e-20
ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citr...   101   9e-20
ref|XP_006406206.1| hypothetical protein EUTSA_v10020073mg [Eutr...   101   9e-20
ref|XP_006296991.1| hypothetical protein CARUB_v10012985mg [Caps...   101   9e-20
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   101   9e-20
ref|XP_002520572.1| pentatricopeptide repeat-containing protein,...   100   3e-19
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
tpg|DAA36170.1| TPA: hypothetical protein ZEAMMB73_453858 [Zea m...    99   6e-19
ref|XP_002447051.1| hypothetical protein SORBIDRAFT_06g027570 [S...    99   8e-19
ref|XP_006351208.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_004976701.1| PREDICTED: pentatricopeptide repeat-containi...    96   7e-18
ref|XP_007049051.1| Tetratricopeptide repeat (TPR)-like superfam...    92   1e-16

>ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Populus trichocarpa]
           gi|550335185|gb|EEE92296.2| hypothetical protein
           POPTR_0006s00960g [Populus trichocarpa]
          Length = 820

 Score =  112 bits (279), Expect = 7e-23
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F+L+M MGIKP+ VSFVNVFPA ++ ED KN N LYG+L+K GSEYVNDLFVVSSAIFM+
Sbjct: 211 FRLVMKMGIKPSPVSFVNVFPAFSSVEDFKNANALYGMLVKMGSEYVNDLFVVSSAIFMF 270

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL  I+ A +VF    +KNTE+
Sbjct: 271 AELGHIDFARKVFDHCLEKNTEI 293


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  103 bits (257), Expect = 2e-20
 Identities = 50/83 (60%), Positives = 66/83 (79%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F ++M +GIKP+ VSFVNVFPA ++  D KN NV++G+L+K GSEYVNDL+VVSSAIFMY
Sbjct: 198 FSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMY 257

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL  +E A +VF    ++NTEV
Sbjct: 258 AELGCLEFAKKVFDNCLERNTEV 280


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  103 bits (257), Expect = 2e-20
 Identities = 50/83 (60%), Positives = 66/83 (79%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F ++M +GIKP+ VSFVNVFPA ++  D KN NV++G+L+K GSEYVNDL+VVSSAIFMY
Sbjct: 174 FSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMY 233

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL  +E A +VF    ++NTEV
Sbjct: 234 AELGCLEFAKKVFDNCLERNTEV 256


>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329184|gb|EFH59603.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 824

 Score =  103 bits (256), Expect = 3e-20
 Identities = 52/83 (62%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F ++M M IKP+ VSFVNVFPAVA S   K  NV YGL+LK G EYV DLFVVSSAI MY
Sbjct: 206 FAIMMRMEIKPSPVSFVNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMY 265

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL D+ES+ RVF    ++N EV
Sbjct: 266 AELGDLESSRRVFDSCVERNIEV 288


>gb|EXB53573.1| hypothetical protein L484_009313 [Morus notabilis]
          Length = 820

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/83 (59%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F  +M M I+P+AVSFVNVFPA++   D  N +VLYGLL++ G+EYVNDLFVVSS IFM+
Sbjct: 202 FVRMMRMRIRPSAVSFVNVFPALSGLRDYNNASVLYGLLIRMGAEYVNDLFVVSSGIFMF 261

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           SEL  ++ A ++F LS +KNTE+
Sbjct: 262 SELGCVDFARKIFYLSVEKNTEI 284


>ref|XP_007216509.1| hypothetical protein PRUPE_ppa025580mg, partial [Prunus persica]
           gi|462412659|gb|EMJ17708.1| hypothetical protein
           PRUPE_ppa025580mg, partial [Prunus persica]
          Length = 804

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           FK++M M I P+AVSFVNVFPA++A  D KN NVLYG+LL+ G EYVNDLF VSSA FMY
Sbjct: 203 FKMMMRMRITPSAVSFVNVFPALSAMGDYKNANVLYGMLLRLGDEYVNDLFAVSSATFMY 262

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
            EL  ++ A ++F    ++NTE+
Sbjct: 263 GELGCLDYARKIFDHCLERNTEI 285


>ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Citrus sinensis]
          Length = 833

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/83 (55%), Positives = 67/83 (80%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F++++ MGI+P+ +SFVNVFPA+++  D K+ +V+YGLL+K GSEYVNDLFV SSAIFMY
Sbjct: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL   + A ++F +  ++NTEV
Sbjct: 274 AELGCFDFARKIFDICLERNTEV 296


>ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
           gi|11994734|dbj|BAB03063.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|110739449|dbj|BAF01634.1| hypothetical protein
           [Arabidopsis thaliana] gi|332643073|gb|AEE76594.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 820

 Score =  101 bits (252), Expect = 9e-20
 Identities = 51/83 (61%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F ++M M +KP+ VSFVNVFPAV+ S   K  NV YGL+LK G EYV DLFVVSSAI MY
Sbjct: 202 FGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMY 261

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL DIES+ RVF    ++N EV
Sbjct: 262 AELGDIESSRRVFDSCVERNIEV 284


>ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citrus clementina]
           gi|557531841|gb|ESR43024.1| hypothetical protein
           CICLE_v10011066mg [Citrus clementina]
          Length = 833

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/83 (55%), Positives = 66/83 (79%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F++++ MGI+P+ +SFVNVFPA ++  D K+ +V+YGLL+K GSEYVNDLFV SSAIFMY
Sbjct: 214 FRMMLRMGIRPSTISFVNVFPAFSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL   + A ++F +  ++NTEV
Sbjct: 274 AELGCFDFARKIFDICLERNTEV 296


>ref|XP_006406206.1| hypothetical protein EUTSA_v10020073mg [Eutrema salsugineum]
           gi|557107352|gb|ESQ47659.1| hypothetical protein
           EUTSA_v10020073mg [Eutrema salsugineum]
          Length = 825

 Score =  101 bits (252), Expect = 9e-20
 Identities = 51/83 (61%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F ++M M IKP+ VSFVNVFPAV+ S   K  NV YGL+LK G EYV DLFVVSSAI MY
Sbjct: 206 FAIMMRMEIKPSPVSFVNVFPAVSTSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMY 265

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL D+ES+ RVF    ++N EV
Sbjct: 266 AELGDLESSRRVFESCVERNIEV 288


>ref|XP_006296991.1| hypothetical protein CARUB_v10012985mg [Capsella rubella]
           gi|565478704|ref|XP_006296992.1| hypothetical protein
           CARUB_v10012985mg [Capsella rubella]
           gi|482565700|gb|EOA29889.1| hypothetical protein
           CARUB_v10012985mg [Capsella rubella]
           gi|482565701|gb|EOA29890.1| hypothetical protein
           CARUB_v10012985mg [Capsella rubella]
          Length = 824

 Score =  101 bits (252), Expect = 9e-20
 Identities = 51/83 (61%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F ++M M IKP+ VSFVNVFPAV+ S+  K  NV YGL+LK G EYV DLFVVSSAI MY
Sbjct: 206 FAIMMRMEIKPSPVSFVNVFPAVSTSKSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMY 265

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL D ES+ RVF    ++N EV
Sbjct: 266 AELGDFESSRRVFDSCVERNIEV 288


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  101 bits (252), Expect = 9e-20
 Identities = 49/83 (59%), Positives = 62/83 (74%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F+ +M MGI+PT VSFVNVFPAV    D  N NVLYGL++K GS+YV+D FVVSSAIFMY
Sbjct: 206 FRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMY 265

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL  ++ A  +F    ++NTEV
Sbjct: 266 AELGCVDFAREIFDCCLERNTEV 288


>ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540232|gb|EEF41805.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  100 bits (248), Expect = 3e-19
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F+L+M  GIKP+ VSFVNVFPA+++  D KN NVLYG+LLK G+EY NDLFVVSSAI MY
Sbjct: 88  FRLMMKWGIKPSPVSFVNVFPAISSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMY 147

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL  ++   +VF    +K+ EV
Sbjct: 148 AELGCLDLCRKVFDSCLEKSAEV 170


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/83 (57%), Positives = 62/83 (74%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F+ +M MGI+PT VSFVNVFPAV    D  N NVLYGL++K GS++V+D FVVSSAIFMY
Sbjct: 206 FRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMY 265

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL  ++ A  +F    ++NTEV
Sbjct: 266 AELGCVDFAREIFDCCLERNTEV 288


>tpg|DAA36170.1| TPA: hypothetical protein ZEAMMB73_453858 [Zea mays]
          Length = 829

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/83 (66%), Positives = 62/83 (74%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F  ++  GIKPT VSFVNVFPAVA  ED     VLYGLL+K G EYVNDLFVVSSAI M+
Sbjct: 233 FVRMLEDGIKPTPVSFVNVFPAVA-KEDPSWSFVLYGLLVKHGMEYVNDLFVVSSAIVMF 291

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           SEL D++SA RVF  +  KNTEV
Sbjct: 292 SELGDVQSAWRVFEYAAKKNTEV 314


>ref|XP_002447051.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
           gi|241938234|gb|EES11379.1| hypothetical protein
           SORBIDRAFT_06g027570 [Sorghum bicolor]
          Length = 818

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 55/83 (66%), Positives = 62/83 (74%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F  ++  GIKPT VSFVNVFPAVA  ED     VLYGLL+K G EYVNDLFVVSSAI M+
Sbjct: 230 FARMLEDGIKPTPVSFVNVFPAVA-KEDPSWSFVLYGLLVKHGREYVNDLFVVSSAIAMF 288

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           SEL D++SA RVF  +  KNTEV
Sbjct: 289 SELGDLQSAWRVFEYTAKKNTEV 311


>ref|XP_006351208.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like, partial [Solanum tuberosum]
          Length = 831

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 46/83 (55%), Positives = 66/83 (79%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F ++M +GIKPT VSF+NVFPAV+   D +  +VLYGLL+K G+ YVNDLFVVS+AI MY
Sbjct: 213 FVMMMRLGIKPTVVSFINVFPAVSEIGDVRVADVLYGLLVKLGNAYVNDLFVVSAAIVMY 272

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL+ ++ A+R+F  + ++NTE+
Sbjct: 273 AELACVDLATRIFENTCERNTEI 295


>ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Solanum lycopersicum]
          Length = 835

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 45/83 (54%), Positives = 65/83 (78%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F ++M +GIKPT VSF+NVFPAV+   D +  +VLYGLL+K G+ YVND+FVVS+AI MY
Sbjct: 215 FVMMMKLGIKPTVVSFINVFPAVSEIGDVRVADVLYGLLVKLGNAYVNDMFVVSAAIVMY 274

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL  ++ A+R+F  + ++NTE+
Sbjct: 275 AELGCVDFATRIFENTCERNTEI 297


>ref|XP_004976701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Setaria italica]
          Length = 803

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 53/83 (63%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           F  ++  G+KPT VSFVNVFPAVA S D      LYGLLLK G EYVNDLFVVSSAI M+
Sbjct: 207 FACMLEDGVKPTPVSFVNVFPAVA-SGDPNWSFALYGLLLKHGVEYVNDLFVVSSAIVMF 265

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           SEL D++SA +VF  +  KNTEV
Sbjct: 266 SELGDVQSAWKVFEHTAKKNTEV 288


>ref|XP_007049051.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
           [Theobroma cacao] gi|590711248|ref|XP_007049052.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 2 [Theobroma cacao] gi|508701312|gb|EOX93208.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 2 [Theobroma cacao] gi|508701313|gb|EOX93209.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 2 [Theobroma cacao]
          Length = 732

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 45/83 (54%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   FKLIMSMGIKPTAVSFVNVFPAVAASEDQKNCNVLYGLLLKFGSEYVNDLFVVSSAIFMY 181
           FK +M MGI+ +AVSFVNVFPA++  ED  N  VLYG+LLK GSE V+DL+V SSAIFM+
Sbjct: 130 FKKMMKMGIRLSAVSFVNVFPALSGLEDYNNAEVLYGMLLKLGSECVDDLYVASSAIFMF 189

Query: 182 SELSDIESASRVFGLSTDKNTEV 250
           +EL  ++ A ++F   +  N E+
Sbjct: 190 AELGCLDFARKIFDNCSQGNIEI 212