BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00030200
         (349 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320045.2| hypothetical protein POPTR_0014s01150g [Popu...   139   4e-31
gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]              139   4e-31
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          134   1e-29
ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatul...   122   7e-26
emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]   121   1e-25
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]   117   2e-24
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   112   7e-23
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]   111   9e-23
emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]   111   1e-22
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   110   2e-22
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   110   2e-22
emb|CAN83401.1| hypothetical protein VITISV_005673 [Vitis vinifera]   109   3e-22
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         109   3e-22
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   109   3e-22
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           108   6e-22
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     108   8e-22
emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]   108   8e-22
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]   107   1e-21
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]   107   1e-21
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   107   2e-21

>ref|XP_002320045.2| hypothetical protein POPTR_0014s01150g [Populus trichocarpa]
           gi|550323083|gb|EEE98360.2| hypothetical protein
           POPTR_0014s01150g [Populus trichocarpa]
          Length = 905

 Score =  139 bits (350), Expect = 4e-31
 Identities = 68/88 (77%), Positives = 76/88 (86%)
 Frame = -2

Query: 348 IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
           IWLHGL+ DLGI QE V V+CDSQSAI LAKNQVHH+RTKHIDVRFHFVREI++EG I+L
Sbjct: 11  IWLHGLIEDLGIVQEHVDVHCDSQSAICLAKNQVHHSRTKHIDVRFHFVREIVDEGDILL 70

Query: 168 QKINTKDNLADMLTKIVPTIKFEHCLNL 85
           QKI T DN ADMLTK V  IKF+HCL+L
Sbjct: 71  QKIGTADNPADMLTKCVSGIKFQHCLDL 98


>gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]
          Length = 353

 Score =  139 bits (350), Expect = 4e-31
 Identities = 68/88 (77%), Positives = 76/88 (86%)
 Frame = -2

Query: 348 IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
           IWLHGL+ DLGI QE V V+CDSQSAI LAKNQVHH+RTKHIDVRFHFVREI++EG I+L
Sbjct: 11  IWLHGLIEDLGIVQEHVDVHCDSQSAICLAKNQVHHSRTKHIDVRFHFVREIVDEGDILL 70

Query: 168 QKINTKDNLADMLTKIVPTIKFEHCLNL 85
           QKI T DN ADMLTK V  IKF+HCL+L
Sbjct: 71  QKIGTADNPADMLTKCVSGIKFQHCLDL 98


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  134 bits (337), Expect = 1e-29
 Identities = 62/91 (68%), Positives = 78/91 (85%)
 Frame = -2

Query: 348 IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
           IWL GLLGDLG+ QE +AV CD+QSAI LAKNQ +HARTKHIDV++H+VREIIE G ++L
Sbjct: 203 IWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLL 262

Query: 168 QKINTKDNLADMLTKIVPTIKFEHCLNLINM 76
           +KI+TKDN +DMLTK+V  +KF+HCL LI +
Sbjct: 263 KKIDTKDNPSDMLTKVVSEVKFQHCLKLIQI 293


>ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatula]
           gi|355507159|gb|AES88301.1| Aspartyl-tRNA synthetase
           [Medicago truncatula]
          Length = 803

 Score =  122 bits (305), Expect = 7e-26
 Identities = 53/89 (59%), Positives = 74/89 (83%)
 Frame = -2

Query: 348 IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
           IWL G++G+LGI QECV ++CDSQSAIHLA +QV+H RTKHID+R HFVR++IE   IV+
Sbjct: 66  IWLKGMIGELGITQECVKIHCDSQSAIHLANHQVYHERTKHIDIRLHFVRDMIESKEIVV 125

Query: 168 QKINTKDNLADMLTKIVPTIKFEHCLNLI 82
           +K+ +++N AD+ TK +P  +F+HCL+LI
Sbjct: 126 EKVASEENPADVFTKSLPRSRFKHCLDLI 154


>emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]
          Length = 215

 Score =  121 bits (303), Expect = 1e-25
 Identities = 56/93 (60%), Positives = 75/93 (80%)
 Frame = -2

Query: 348 IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
           +WL GL+ +LGI Q  V + CDSQSAI+LAKNQV+HARTKHIDVRFH ++E++  G ++L
Sbjct: 122 LWLTGLVKELGIQQGGVQLYCDSQSAIYLAKNQVYHARTKHIDVRFHKIKELVSSGELLL 181

Query: 168 QKINTKDNLADMLTKIVPTIKFEHCLNLINMKQ 70
           +K++T +N ADMLTK V   KF+HCLNLIN+ +
Sbjct: 182 EKVHTSENAADMLTKPVTIEKFKHCLNLINVSK 214


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score =  117 bits (292), Expect = 2e-24
 Identities = 55/91 (60%), Positives = 71/91 (78%)
 Frame = -2

Query: 348  IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
            +WL GL+ +LG+ Q+ V V CDSQSA+ L KNQ  H RTKHIDVRFHF+R+I E+G + +
Sbjct: 846  LWLKGLVSELGMNQKSVTVFCDSQSALCLTKNQGFHERTKHIDVRFHFIRDIAEQGLVNV 905

Query: 168  QKINTKDNLADMLTKIVPTIKFEHCLNLINM 76
             KI+TKDN ADMLTK +  +KF+ CLNLIN+
Sbjct: 906  SKISTKDNPADMLTKPISKVKFKQCLNLINV 936


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  112 bits (279), Expect = 7e-23
 Identities = 55/91 (60%), Positives = 68/91 (74%)
 Frame = -2

Query: 348  IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
            IWL G+  +L + +  V V CD+QSAIHLAKNQ  H R+KHIDVR HFVR+II  G I +
Sbjct: 1115 IWLKGITEELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGV 1174

Query: 168  QKINTKDNLADMLTKIVPTIKFEHCLNLINM 76
             K++TKDN +DMLTK +   KF+HCLNLINM
Sbjct: 1175 GKVHTKDNPSDMLTKSLNVTKFKHCLNLINM 1205


>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
          Length = 735

 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/91 (60%), Positives = 68/91 (74%)
 Frame = -2

Query: 348 IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
           IWL G++ +L + +  V V CD+QSAIHLAKNQ  H R+KHIDVR HFVR+II  G I +
Sbjct: 642 IWLKGIIEELAMYKGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAVGEIGV 701

Query: 168 QKINTKDNLADMLTKIVPTIKFEHCLNLINM 76
            K+ TKDN +DMLTK +   KF+HCLNLINM
Sbjct: 702 GKVPTKDNPSDMLTKSLNVTKFKHCLNLINM 732


>emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]
          Length = 815

 Score =  111 bits (277), Expect = 1e-22
 Identities = 51/87 (58%), Positives = 70/87 (80%)
 Frame = -2

Query: 336 GLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVLQKIN 157
           GL+ +LGI Q  V + CDSQSAI+LAKNQV+H +TKHIDVRFH +RE++  G ++L+K++
Sbjct: 726 GLVKELGIQQGGVQLYCDSQSAIYLAKNQVYHVKTKHIDVRFHNIRELVSSGELLLEKVH 785

Query: 156 TKDNLADMLTKIVPTIKFEHCLNLINM 76
           T +N A+ML K + T KF+HCLNLIN+
Sbjct: 786 TSENAANMLRKPITTKKFKHCLNLINV 812


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  110 bits (275), Expect = 2e-22
 Identities = 48/91 (52%), Positives = 70/91 (76%)
 Frame = -2

Query: 348  IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
            IWL GL  +L   + C++++CDSQSAI+L K+Q+ H RTKHID+++HFVR++IEEG + +
Sbjct: 1241 IWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKV 1300

Query: 168  QKINTKDNLADMLTKIVPTIKFEHCLNLINM 76
             KI+T DN ADM+TK +P  KFE C +L+ +
Sbjct: 1301 CKISTHDNPADMMTKPIPVAKFELCSSLVGL 1331


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  110 bits (275), Expect = 2e-22
 Identities = 48/91 (52%), Positives = 70/91 (76%)
 Frame = -2

Query: 348  IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
            IWL GL  +L   + C++++CDSQSAI+L K+Q+ H RTKHID+++HFVR++IEEG + +
Sbjct: 1241 IWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKV 1300

Query: 168  QKINTKDNLADMLTKIVPTIKFEHCLNLINM 76
             KI+T DN ADM+TK +P  KFE C +L+ +
Sbjct: 1301 CKISTHDNPADMMTKPIPVAKFELCSSLVGL 1331


>emb|CAN83401.1| hypothetical protein VITISV_005673 [Vitis vinifera]
          Length = 209

 Score =  109 bits (273), Expect = 3e-22
 Identities = 49/92 (53%), Positives = 70/92 (76%)
 Frame = -2

Query: 348 IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
           +W+ G+L  LG+ QE + V+CD++SAIHL KNQ+ H +TKHIDVR +FV+ I+ +G I +
Sbjct: 116 LWIEGMLNKLGMRQEVLTVHCDNKSAIHLTKNQMFHEKTKHIDVRMNFVKNILTKGEIQV 175

Query: 168 QKINTKDNLADMLTKIVPTIKFEHCLNLINMK 73
            KI+ +DNL DMLTK V   KF+HCL+L+ +K
Sbjct: 176 VKIHIEDNLVDMLTKSVIVAKFKHCLDLVQVK 207


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/92 (55%), Positives = 68/92 (73%)
 Frame = -2

Query: 348  IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
            IWL GLL D G  Q+ V + CDSQSAI L+KN VHH RTKHIDV+FHF+REII +G + +
Sbjct: 1270 IWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIREIIADGKVEV 1329

Query: 168  QKINTKDNLADMLTKIVPTIKFEHCLNLINMK 73
             KI+T+ N AD+ TK++P  KF+  L+ + +K
Sbjct: 1330 SKISTEKNPADIFTKVLPVNKFQTALDFLRVK 1361


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/92 (55%), Positives = 68/92 (73%)
 Frame = -2

Query: 348  IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
            IWL GLL D G  Q+ V + CDSQSAI L+KN VHH RTKHIDV++HF+REII +G + +
Sbjct: 1263 IWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVKYHFIREIISDGTVEV 1322

Query: 168  QKINTKDNLADMLTKIVPTIKFEHCLNLINMK 73
             KI+T+ N AD+ TK++   KF+  LNL+ +K
Sbjct: 1323 LKISTEKNPADIFTKVLAVSKFQAALNLLRVK 1354


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  108 bits (271), Expect = 6e-22
 Identities = 48/91 (52%), Positives = 69/91 (75%)
 Frame = -2

Query: 348  IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
            IWL GL  +L   + C++++CDSQSAI+L K+Q+ H RTKHID+++HFVR++IEEG + +
Sbjct: 1243 IWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKV 1302

Query: 168  QKINTKDNLADMLTKIVPTIKFEHCLNLINM 76
             KI T DN ADM+TK +P  KFE C +L+ +
Sbjct: 1303 CKICTHDNPADMMTKPIPVAKFELCSSLVGL 1333


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/82 (62%), Positives = 63/82 (76%)
 Frame = -2

Query: 348  IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
            IWL+GL G LG+ QE V V CDSQSAIHLAKNQV HARTKHID R+H +R+ +E G I++
Sbjct: 1209 IWLNGLAGQLGVHQEGVVVKCDSQSAIHLAKNQVFHARTKHIDARYHRIRDWVEAGVIIV 1268

Query: 168  QKINTKDNLADMLTKIVPTIKF 103
            +K++T DN AD LTK V   K+
Sbjct: 1269 EKVHTDDNAADFLTKPVSVEKY 1290


>emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]
          Length = 367

 Score =  108 bits (270), Expect = 8e-22
 Identities = 52/89 (58%), Positives = 69/89 (77%)
 Frame = -2

Query: 336 GLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVLQKIN 157
           GL+ +LGI Q  V +  DSQSAI+L KNQV+H RTKHIDVRFH + E++  G ++L+K++
Sbjct: 278 GLVKELGIQQGGVELYFDSQSAIYLEKNQVYHPRTKHIDVRFHKISELVSSGELLLEKVH 337

Query: 156 TKDNLADMLTKIVPTIKFEHCLNLINMKQ 70
           T +N ADMLTK V T KF+HCLNLIN+ +
Sbjct: 338 TSENAADMLTKPVTTKKFKHCLNLINVSR 366


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score =  107 bits (268), Expect = 1e-21
 Identities = 55/91 (60%), Positives = 65/91 (71%)
 Frame = -2

Query: 348  IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
            IWL G+  +L I +  V V CD+QSAIHLAKNQ  H R+KHIDVR HFVR II  G I +
Sbjct: 801  IWLKGITEELAIYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRYIIAVGDIGV 860

Query: 168  QKINTKDNLADMLTKIVPTIKFEHCLNLINM 76
             K+ TKDN + MLTK +   KF+HCLNLINM
Sbjct: 861  GKVPTKDNPSGMLTKSLNVTKFKHCLNLINM 891


>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
          Length = 406

 Score =  107 bits (268), Expect = 1e-21
 Identities = 51/88 (57%), Positives = 68/88 (77%)
 Frame = -2

Query: 348 IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
           +WL GL+ +LGI Q  V +  D+QSAI+L KNQV+HARTKHIDVRFH + E++  G ++L
Sbjct: 318 LWLTGLVKELGIQQGGVQLYFDNQSAIYLEKNQVYHARTKHIDVRFHKISELVSSGELLL 377

Query: 168 QKINTKDNLADMLTKIVPTIKFEHCLNL 85
           +K++T +N ADMLTK V T KF+HCL L
Sbjct: 378 KKVHTSENAADMLTKPVTTEKFKHCLKL 405


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/92 (57%), Positives = 67/92 (72%)
 Frame = -2

Query: 348  IWLHGLLGDLGIPQECVAVNCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIEEGGIVL 169
            IWL GL+ DLG+  +   V CDS SAI LAK+QVHH RTKHIDVR+HF+R    E  I +
Sbjct: 1217 IWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQVHHERTKHIDVRYHFLR---SEKRIKV 1273

Query: 168  QKINTKDNLADMLTKIVPTIKFEHCLNLINMK 73
            +K+ T DN ADM TK VP  KF+HCL+L+N++
Sbjct: 1274 KKVGTADNPADMFTKPVPQSKFQHCLDLLNIR 1305