BLASTX nr result
ID: Cocculus23_contig00029862
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00029862
(1148 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera] 63 1e-08
emb|CAN64481.1| hypothetical protein VITISV_002814 [Vitis vinifera] 59 3e-08
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 56 4e-08
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera] 57 8e-08
emb|CAN82795.1| hypothetical protein VITISV_013492 [Vitis vinifera] 57 8e-08
emb|CAN66823.1| hypothetical protein VITISV_003499 [Vitis vinifera] 59 4e-07
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] 50 6e-07
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 52 1e-06
gb|ADF45849.1| reverse transcriptase [Eleocharis macrostachya] 49 1e-06
gb|ADF45885.1| reverse transcriptase [Eleocharis palustris] 49 2e-06
gb|ADF45895.1| reverse transcriptase [Eleocharis quinqueflora] 45 2e-06
emb|CAN63098.1| hypothetical protein VITISV_009456 [Vitis vinifera] 56 4e-06
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera] 55 5e-06
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera] 54 5e-06
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera] 53 7e-06
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 53 9e-06
>emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera]
Length = 685
Score = 63.2 bits (152), Expect(2) = 1e-08
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WF++L LL+ F S+ DQSLFFR+T+ H+T++LVYVGDI
Sbjct: 604 KQAPRAWFERLHKALLQSGFVSSKTDQSLFFRITSTHTTYILVYVGDI 651
Score = 24.3 bits (51), Expect(2) = 1e-08
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 7/29 (24%)
Frame = -1
Query: 410 MEQPPGFVDPKLP-------IAVYSLKKA 345
M QP GFVD K P A+Y LK+A
Sbjct: 578 MSQPQGFVDEKHPEYVCRQHKALYGLKQA 606
>emb|CAN64481.1| hypothetical protein VITISV_002814 [Vitis vinifera]
Length = 575
Score = 59.3 bits (142), Expect(2) = 3e-08
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WF+KL + L+ F A FDQSLF R+TT H+ F++VYV DI
Sbjct: 190 KQAPRAWFEKLCNALIAFGFIVARFDQSLFIRITTTHTIFLIVYVDDI 237
Score = 26.6 bits (57), Expect(2) = 3e-08
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 410 MEQPPGFVDPKLPIAVYSLKKA 345
MEQP GFVD K P V L K+
Sbjct: 164 MEQPLGFVDSKQPHLVCKLHKS 185
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 56.2 bits (134), Expect(3) = 4e-08
Identities = 28/48 (58%), Positives = 31/48 (64%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WF+KL LL F SA DQSLF R T H T++LVYV DI
Sbjct: 1087 KQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDI 1134
Score = 24.6 bits (52), Expect(3) = 4e-08
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 410 MEQPPGFVDPKLPIAVYSLKKA 345
M+QP GF+D + P V L KA
Sbjct: 1061 MQQPQGFIDEQNPNLVCRLHKA 1082
Score = 23.9 bits (50), Expect(3) = 4e-08
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 480 II*VMLAS*SWGIWQLYSNNAILNG 406
++ + S +W I QL NNA LNG
Sbjct: 1029 VVFTIALSRNWAIKQLDVNNAFLNG 1053
>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
Length = 1138
Score = 56.6 bits (135), Expect(3) = 8e-08
Identities = 28/48 (58%), Positives = 31/48 (64%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WF+KL LL F SA DQSLF R T H T++LVYV DI
Sbjct: 845 KQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPSHITYVLVYVDDI 892
Score = 24.6 bits (52), Expect(3) = 8e-08
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 410 MEQPPGFVDPKLPIAVYSLKKA 345
M+QP GF+D + P V L KA
Sbjct: 819 MQQPQGFIDEQNPNLVCRLHKA 840
Score = 22.3 bits (46), Expect(3) = 8e-08
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 480 II*VMLAS*SWGIWQLYSNNAILNG 406
++ + S +W I QL NN LNG
Sbjct: 787 VVFTIALSRNWAIKQLDVNNTFLNG 811
>emb|CAN82795.1| hypothetical protein VITISV_013492 [Vitis vinifera]
Length = 624
Score = 56.6 bits (135), Expect(3) = 8e-08
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WF++L LL+ F S+ DQ LFFR+T+ H+T++LV+V DI
Sbjct: 357 KQAPRAWFERLHKALLQFGFVSSKADQYLFFRITSTHTTYILVFVDDI 404
Score = 25.4 bits (54), Expect(3) = 8e-08
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -1
Query: 410 MEQPPGFVDPKLPIAVYSLKKA 345
M QP GFVD K P V L KA
Sbjct: 331 MSQPQGFVDEKHPKYVCRLHKA 352
Score = 21.6 bits (44), Expect(3) = 8e-08
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 480 II*VMLAS*SWGIWQLYSNNAILNG 406
I+ + S W + QL N+A LNG
Sbjct: 299 IVLTIALSRGWSVRQLDINDAFLNG 323
>emb|CAN66823.1| hypothetical protein VITISV_003499 [Vitis vinifera]
Length = 763
Score = 58.5 bits (140), Expect(2) = 4e-07
Identities = 34/69 (49%), Positives = 41/69 (59%)
Frame = -2
Query: 412 KWSSHLVL*ILNCLLQFTA*KKQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHST 233
K +SHLV + L KQ R WF+KL L+ FTSA FD+SLF R T H+T
Sbjct: 563 KSTSHLVCKLHKSLYGL----KQVPRAWFEKLYEALVGLGFTSAKFDRSLFTRFTMYHTT 618
Query: 232 FMLVYVGDI 206
F+LVYV DI
Sbjct: 619 FLLVYVDDI 627
Score = 23.5 bits (49), Expect(2) = 4e-07
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 480 II*VMLAS*SWGIWQLYSNNAILNG 406
++ + S +W I QL NNA LNG
Sbjct: 522 VVLTITLSRNWKIQQLDINNAFLNG 546
>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
Length = 1361
Score = 49.7 bits (117), Expect(2) = 6e-07
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WF + S LLKH F S+ D SLFF ++L + ++L+YV D+
Sbjct: 990 KQAPRAWFHRFSSFLLKHGFHSSQADSSLFFYHSSLGTVYLLLYVDDM 1037
Score = 31.6 bits (70), Expect(2) = 6e-07
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 410 MEQPPGFVDPKLPIAVYSLKKA 345
MEQPPG+ DP+ P V LK+A
Sbjct: 964 MEQPPGYTDPQFPQHVCRLKRA 985
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 52.4 bits (124), Expect(3) = 1e-06
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WF+KL L F+S DQSLF +T HST++LVYV DI
Sbjct: 1033 KQAPRAWFEKLHQALGILGFSSTKSDQSLFINITPTHSTYILVYVDDI 1080
Score = 25.0 bits (53), Expect(3) = 1e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 410 MEQPPGFVDPKLPIAVYSLKKA 345
M QP GF+DP P V L K+
Sbjct: 1007 MHQPQGFIDPVNPNYVCKLNKS 1028
Score = 21.9 bits (45), Expect(3) = 1e-06
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 450 WGIWQLYSNNAILNG 406
W + QL NNA LNG
Sbjct: 985 WKVRQLDVNNAFLNG 999
>gb|ADF45849.1| reverse transcriptase [Eleocharis macrostachya]
Length = 87
Score = 48.9 bits (115), Expect(2) = 1e-06
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WF KL LL F S+ D SLFF++ + +T++LVYV D+
Sbjct: 40 KQAPRAWFSKLKGFLLAQGFKSSQADHSLFFKVNSHSTTYILVYVDDM 87
Score = 31.6 bits (70), Expect(2) = 1e-06
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1
Query: 410 MEQPPGFVDPKLPIAVYSLKK 348
MEQPPGF +P LP V LKK
Sbjct: 14 MEQPPGFSNPSLPSHVCKLKK 34
>gb|ADF45885.1| reverse transcriptase [Eleocharis palustris]
Length = 88
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQASR WF+KL S LL+H FT + D SLF ++ ++LVYV D+
Sbjct: 40 KQASRAWFNKLKSFLLQHKFTCSKSDSSLFIFKSSAGIIYLLVYVDDM 87
Score = 30.8 bits (68), Expect(2) = 2e-06
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 7/30 (23%)
Frame = -1
Query: 410 MEQPPGFVDPKLP-------IAVYSLKKAS 342
M+QPPGF DP+ P A+Y LK+AS
Sbjct: 14 MQQPPGFADPQFPDHGCLLHKALYGLKQAS 43
>gb|ADF45895.1| reverse transcriptase [Eleocharis quinqueflora]
Length = 87
Score = 45.1 bits (105), Expect(2) = 2e-06
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WF KL + LL F+ + DQSLF +++ ++LVYV D+
Sbjct: 40 KQAPRAWFSKLKNFLLAQGFSCSQADQSLFIKVSHTSVVYLLVYVDDM 87
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -1
Query: 410 MEQPPGFVDPKLPIAVYSLKKA 345
M+QPPGFVDP+ P V LKKA
Sbjct: 14 MQQPPGFVDPQYPSHVCKLKKA 35
>emb|CAN63098.1| hypothetical protein VITISV_009456 [Vitis vinifera]
Length = 335
Score = 56.2 bits (134), Expect(2) = 4e-06
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WF+KL +TL F SA D+SLF R+T HST +LVYV DI
Sbjct: 135 KQAPRAWFEKLSTTLYAFGFISAKSDRSLFIRVTKSHSTCILVYVDDI 182
Score = 22.3 bits (46), Expect(2) = 4e-06
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 492 ASRLII*VMLAS*SWGIWQLYSNNAILNG 406
A+ ++ + S W I QL NNA LNG
Sbjct: 73 ATTRVMLTIALSRGWLIHQLDVNNAFLNG 101
>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
Length = 1079
Score = 54.7 bits (130), Expect(2) = 5e-06
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = -2
Query: 343 ASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
A R WF+KL L+ FTSA FD+SLF R T H+TF+LVYV DI
Sbjct: 859 APRAWFEKLYEALVDLGFTSAKFDRSLFTRFTMDHTTFLLVYVDDI 904
Score = 23.5 bits (49), Expect(2) = 5e-06
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 480 II*VMLAS*SWGIWQLYSNNAILNG 406
++ + S +W I QL NNA LNG
Sbjct: 812 VVLTIALSRNWKIQQLDINNAFLNG 836
>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
Length = 955
Score = 53.5 bits (127), Expect(2) = 5e-06
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WFDKL +L + F+S DQSLF R T S F+LVYV DI
Sbjct: 690 KQAPRAWFDKLKISLQQFGFSSTKXDQSLFVRFTNCSSLFVLVYVDDI 737
Score = 24.6 bits (52), Expect(2) = 5e-06
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 480 II*VMLAS*SWGIWQLYSNNAILNG 406
++ ++ S SW I QL NNA LNG
Sbjct: 630 VVLXIVVSQSWFIRQLDVNNAFLNG 654
>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
Length = 1242
Score = 53.1 bits (126), Expect(2) = 7e-06
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WFDKL +L + F+S DQSLF R T S F+LVYV DI
Sbjct: 1145 KQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDI 1192
Score = 24.6 bits (52), Expect(2) = 7e-06
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 480 II*VMLAS*SWGIWQLYSNNAILNG 406
++ ++ S SW I QL NN LNG
Sbjct: 1085 VVLAIVVSQSWSIRQLDVNNVFLNG 1109
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 53.1 bits (126), Expect(2) = 9e-06
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2
Query: 349 KQASRFWFDKLDSTLLKHSFTSAHFDQSLFFRLTTLHSTFMLVYVGDI 206
KQA R WFDKL +L + F+S DQSLF R T S F+LVYV DI
Sbjct: 899 KQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDI 946
Score = 24.3 bits (51), Expect(2) = 9e-06
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 480 II*VMLAS*SWGIWQLYSNNAILNG 406
++ + S SW I QL NNA LNG
Sbjct: 839 VVLAIAVSQSWCIRQLDVNNAFLNG 863