BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00029805
         (434 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   119   6e-25
emb|CAN68642.1| hypothetical protein VITISV_030809 [Vitis vinifera]   104   1e-20
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun...   102   4e-20
gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus...   101   1e-19
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...    92   1e-16
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...    89   5e-16
ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [A...    88   1e-15
gb|EXB88442.1| RNA pseudourine synthase 6 [Morus notabilis]            88   1e-15
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...    86   5e-15
ref|XP_006449064.1| hypothetical protein CICLE_v10015055mg [Citr...    86   5e-15
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...    85   9e-15
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob...    84   2e-14
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...    82   6e-14
ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chl...    81   1e-13
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...    81   1e-13
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...    81   2e-13
ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phas...    80   2e-13
ref|XP_006597578.1| PREDICTED: RNA pseudouridine synthase 6, chl...    80   3e-13
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl...    80   3e-13
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...    80   3e-13

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis
           vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
           product [Vitis vinifera]
          Length = 472

 Score =  119 bits (297), Expect = 6e-25
 Identities = 67/125 (53%), Positives = 83/125 (66%)
 Frame = +1

Query: 55  GAACFTSIFTTSLVSSLGTSNRRNFSASIALVRALTSALVVKKKHSKNLSCCSSFGSSNH 234
           G A  TSIFT+ LVSSL  SN R+F   +AL R L S+ V  ++H + + C      SN+
Sbjct: 2   GTAILTSIFTSGLVSSLWNSNCRSFGTPVALARTLASSNVFSRRHKRVVWC------SNN 55

Query: 235 RTCYASRASVEDAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICK 414
            TC  +R     + +A +SSV NGYP+Y RLLPCP +NGPPRVEHLVV+E G VLDYI K
Sbjct: 56  PTC--TRELTASSDSANTSSV-NGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISK 112

Query: 415 TLDLP 429
            LDLP
Sbjct: 113 ALDLP 117


>emb|CAN68642.1| hypothetical protein VITISV_030809 [Vitis vinifera]
          Length = 400

 Score =  104 bits (259), Expect = 1e-20
 Identities = 60/118 (50%), Positives = 76/118 (64%)
 Frame = +1

Query: 55  GAACFTSIFTTSLVSSLGTSNRRNFSASIALVRALTSALVVKKKHSKNLSCCSSFGSSNH 234
           G A  TSIFT+ LVSSL  SN R+F   +AL R L S+ V  ++H + + C      SN+
Sbjct: 2   GTAILTSIFTSGLVSSLWNSNCRSFGTPVALARTLASSNVFSRRHKRVVWC------SNN 55

Query: 235 RTCYASRASVEDAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYI 408
            TC  +R     + +A +SSV NGYP+Y RLLPCP +NGPPRVEHLVV+E G V D I
Sbjct: 56  PTC--TRELTASSDSANTSSV-NGYPEYHRLLPCPSQNGPPRVEHLVVSEGGFVADLI 110


>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
           gi|462409392|gb|EMJ14726.1| hypothetical protein
           PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  102 bits (255), Expect = 4e-20
 Identities = 57/116 (49%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
 Frame = +1

Query: 97  SSLGTSNRRNFSASIALVRALTSALVVKKKHSKN-----LSCCSSFGSSNHRTCYASRAS 261
           +S+  +  R+FSA +ALVR L    V   +H+ N     ++C S   SS  RT +A  + 
Sbjct: 7   TSMLANGCRSFSAPVALVRTLALTHVALSEHANNYKHVKVACFSR--SSKKRTTFACESL 64

Query: 262 VEDAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
            +      S S  NGYP+Y+RLLPCP  NGPPRVEHLVV+E G VL+YICKTLDLP
Sbjct: 65  KQGVTQPTSVSSVNGYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLP 120


>gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus guttatus]
          Length = 483

 Score =  101 bits (252), Expect = 1e-19
 Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
 Frame = +1

Query: 49  MSGAACFTSIFTTSLVSSLGTSN--RRNFSASIALVRALTSALVVKKKHSKNLSCCSSFG 222
           M   A F+SI T S+VSSL +++  RRNF   I L R L S     +   K+  C ++  
Sbjct: 1   MGATAAFSSILTGSIVSSLLSASTCRRNFFIPINLARTLASTQSSFRHIHKHHICNAAH- 59

Query: 223 SSNHRTCYASRASVEDAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLD 402
              +R+C ++ ++     +++S+S +N YP Y RLLPCP +NGPPRVEH VVTE G VLD
Sbjct: 60  --RNRSCESTASAYVSTDSSISTSNNNSYPPYGRLLPCPSQNGPPRVEHFVVTEGGPVLD 117

Query: 403 YICKTLDLP 429
           YI K+L++P
Sbjct: 118 YISKSLNIP 126


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
           PREDICTED: RNA pseudouridine synthase 6,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 56/126 (44%), Positives = 73/126 (57%), Gaps = 5/126 (3%)
 Frame = +1

Query: 67  FTSIFTTSLVSS-LGTSNRRN-FSASIALVRALTSA---LVVKKKHSKNLSCCSSFGSSN 231
           FT I T SL++S L T N RN F +   +V    S    L+  K H K L+      SS 
Sbjct: 8   FTPILTNSLIASRLWTPNWRNGFFSPFNMVHTFASTRSRLLKNKNHYKRLAL-----SSC 62

Query: 232 HRTCYASRASVEDAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYIC 411
            R+      ++ D  +   +  SNG+ +Y RL+PCPL+N PPRVEHLVVT+ G VL+YIC
Sbjct: 63  SRSFSCQSTALSDISSTSHTVSSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVLEYIC 122

Query: 412 KTLDLP 429
           K LDLP
Sbjct: 123 KALDLP 128


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
           gi|550340110|gb|EEE85437.2| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 470

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
 Frame = +1

Query: 94  VSSLGTSNRRNFSASIALVRAL--TSALVVKKKHSKNLSCCSSFGSSNHRTCYASRASVE 267
           ++S+ + + R+FSA + L+R L  T A  + KK    L  CS   S    +C + +  + 
Sbjct: 6   LASIFSYSYRSFSAPVTLLRTLAFTRAYSLNKKA---LVWCSL--SKRKLSCESLKQDI- 59

Query: 268 DAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
            A T  +SSV NGYP+Y+RLLPCP  N PPR+EHLVV+E G VLDYICK LDLP
Sbjct: 60  -ACTTATSSV-NGYPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYICKALDLP 111


>ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [Amborella trichopoda]
           gi|548862161|gb|ERN19525.1| hypothetical protein
           AMTR_s00062p00043970 [Amborella trichopoda]
          Length = 477

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 52/121 (42%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
 Frame = +1

Query: 70  TSIFTTSLVSSLGTSNRRNFSASIALVRALTSALVVKKKHSKNLSCCS-SFGSSNHRTCY 246
           +S+  + L++S+ +SN R      +L  +LT        HS   + CS SF         
Sbjct: 7   SSLLFSHLITSVWSSNWRQIVTPRSL--SLTKVTAQFLTHSYRPAPCSWSFTKR-----L 59

Query: 247 ASRASVEDAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDL 426
               S+  A T +S+S SN YP Y+ LLPCP +NGPPR+EHL+V+E G VLDYICK LDL
Sbjct: 60  VGSTSITQANTTISTSPSNVYPGYTSLLPCPSKNGPPRIEHLIVSEGGPVLDYICKALDL 119

Query: 427 P 429
           P
Sbjct: 120 P 120


>gb|EXB88442.1| RNA pseudourine synthase 6 [Morus notabilis]
          Length = 446

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
 Frame = +1

Query: 97  SSLGTSNRRNF-SASIALVRALTSAL--VVKKKHSKNLSCCSSFGSSNHRTCYASRASVE 267
           +SL  +  R+F S  + +VR+L   L  V   +HS  L        S ++  +A +++  
Sbjct: 7   ASLFANGCRSFNSRPVVVVRSLGLRLSHVSLPQHSNKLLQVGWNSHSPNKRPFACQSTTT 66

Query: 268 DAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
           D      +S  N YPKY RLLPCP  N PPRVEHLVVTE GRVLDYICK LDLP
Sbjct: 67  DVAQINPASSLNCYPKYDRLLPCPSHNLPPRVEHLVVTEEGRVLDYICKALDLP 120


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
           gi|557551677|gb|ESR62306.1| hypothetical protein
           CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
 Frame = +1

Query: 97  SSLGTSNRRNFSASIALVRALTSALVVKKKHSKNLSCCSSFGSSNHR-TCYASRASV--- 264
           SS+ T+N R+  A ++L+R L S      ++    +   SF SSN    C + +  V   
Sbjct: 7   SSIFTNNGRSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTH 66

Query: 265 --EDAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
               A  A ++  S GYP+Y RLLPCP +N PPRVEHLVV+E G VL+YIC+ L+LP
Sbjct: 67  TDTTATAAAATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLP 123


>ref|XP_006449064.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
           gi|557551675|gb|ESR62304.1| hypothetical protein
           CICLE_v10015055mg [Citrus clementina]
          Length = 469

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
 Frame = +1

Query: 97  SSLGTSNRRNFSASIALVRALTSALVVKKKHSKNLSCCSSFGSSNHR-TCYASRASV--- 264
           SS+ T+N R+  A ++L+R L S      ++    +   SF SSN    C + +  V   
Sbjct: 7   SSIFTNNGRSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTH 66

Query: 265 --EDAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
               A  A ++  S GYP+Y RLLPCP +N PPRVEHLVV+E G VL+YIC+ L+LP
Sbjct: 67  TDTTATAAAATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLP 123


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
           PREDICTED: RNA pseudouridine synthase 6,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 6/117 (5%)
 Frame = +1

Query: 97  SSLGTSNRRNFSASIALVRALTSALVVKKKHSKNLSCCSSFGSSNHR-TCYASRASV--- 264
           SS+ T+N R+  A ++L+R L S      ++    +   SF SSN    C + +  V   
Sbjct: 7   SSIFTNNGRSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTH 66

Query: 265 -EDAGTALSSSVSN-GYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
            + A  A +++ S+ GYP+Y RLLPCP +N PPRVEHLVV+E G VL+YIC+ L+LP
Sbjct: 67  TDTAAIAAATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLP 123


>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508781387|gb|EOY28643.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 491

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 55/134 (41%), Positives = 75/134 (55%), Gaps = 18/134 (13%)
 Frame = +1

Query: 82  TTSLVSSLGTSNRRNFSASIALVRALTSA----LVVKKKHSKNLSCCSSFGSSNHR-TCY 246
           + SL S  G   R +  A ++L+R L S       + K +SK +   S  GSS    +C 
Sbjct: 3   SASLASIFGIGYR-SLGAPMSLLRTLASTGASLYKLNKNYSKTVLSWSCLGSSRRELSCL 61

Query: 247 ASRASVEDAGTALSSSVSN-------------GYPKYSRLLPCPLENGPPRVEHLVVTET 387
           +++  ++ A TA ++SV+               YP+Y RLLPCP  NGPPRVEHLVV+E 
Sbjct: 62  STK--MDAAQTASATSVNGVLLYFMIEIHFLFSYPEYHRLLPCPSHNGPPRVEHLVVSEG 119

Query: 388 GRVLDYICKTLDLP 429
           G VL+YICK LDLP
Sbjct: 120 GPVLEYICKALDLP 133


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 476

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
 Frame = +1

Query: 94  VSSLGTSNRRNFSASIALVRALTS--ALVVKKKHSKNLSCCSSFGSSNHRTCYASRASVE 267
           ++S+     R+F   + ++R L S  A    + H KN    + F  ++H   +   +S  
Sbjct: 6   LASIFAGGYRSFVTPVTVLRTLASTHAYSFHRHHPKN--ALARFSLNSHERKFCCESSKP 63

Query: 268 DAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
           +     ++S  NG   Y RLLPCP  N PPR+EHLVV E G VLDYICK LDLP
Sbjct: 64  EVAYTTNTSCVNGNSDYDRLLPCPSYNRPPRIEHLVVLEEGPVLDYICKALDLP 117


>ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X2 [Glycine max]
          Length = 390

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
 Frame = +1

Query: 184 KHSKNLSCCSSFGSSNHRTCYASRA--SVEDAGTALSSSVSNGYPKYSRLLPCPLENGPP 357
           KH+ +  C SS  S+   T  A  A  S  DAG   ++S S+ +PKY RLLPCP    PP
Sbjct: 42  KHAPSWGCRSSHNSN---TALAGEAEFSTTDAGNLTATSSSDSFPKYDRLLPCPSHKNPP 98

Query: 358 RVEHLVVTETGRVLDYICKTLDLP 429
           R+EHLV++E G VL+ ICK LDLP
Sbjct: 99  RIEHLVISEGGPVLELICKALDLP 122


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Glycine max]
          Length = 478

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
 Frame = +1

Query: 184 KHSKNLSCCSSFGSSNHRTCYASRA--SVEDAGTALSSSVSNGYPKYSRLLPCPLENGPP 357
           KH+ +  C SS  S+   T  A  A  S  DAG   ++S S+ +PKY RLLPCP    PP
Sbjct: 42  KHAPSWGCRSSHNSN---TALAGEAEFSTTDAGNLTATSSSDSFPKYDRLLPCPSHKNPP 98

Query: 358 RVEHLVVTETGRVLDYICKTLDLP 429
           R+EHLV++E G VL+ ICK LDLP
Sbjct: 99  RIEHLVISEGGPVLELICKALDLP 122


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
           lycopersicum]
          Length = 448

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 45/92 (48%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
 Frame = +1

Query: 163 SALVVKKKHSKNL---SCCSSFGSSNHRTCYASRASVEDAGTALSSSVSNGYPKYSRLLP 333
           S L+  K H K L   SC  SF       C  S A + D  +   +  SNG+ +Y RL+P
Sbjct: 10  SRLLKNKNHYKRLALSSCSKSF-------CCQSTA-LSDINSTSHTVSSNGHLRYGRLMP 61

Query: 334 CPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
           CPL+N PPRVEHLVVT+ G V++YICK LDLP
Sbjct: 62  CPLQNSPPRVEHLVVTKEGPVVEYICKALDLP 93


>ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
           gi|561020966|gb|ESW19737.1| hypothetical protein
           PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +1

Query: 133 ASIALVRALTSALVVKKKH-SKNLS--CCSSFGSSNHRTCYASRASVEDAGTALSSSVSN 303
           A+ A+ R+   +    + H +KN    CC S  +S       S  S  DA    ++S SN
Sbjct: 21  ATPAVARSFRMSRAALRNHQNKNAPSWCCRSSYNSYTAIAAESEFSKTDAENLTATSSSN 80

Query: 304 GYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
             PKY RLLPCPL   PPRVEHLVV+E G VL++ICK L+LP
Sbjct: 81  SLPKYDRLLPCPLHKTPPRVEHLVVSEGGPVLEHICKALELP 122


>ref|XP_006597578.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X2 [Glycine max]
          Length = 390

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 43/99 (43%), Positives = 56/99 (56%)
 Frame = +1

Query: 133 ASIALVRALTSALVVKKKHSKNLSCCSSFGSSNHRTCYASRASVEDAGTALSSSVSNGYP 312
           A+   VR   +ALV  +       CC S  +SN      +     DAG   ++S S+ + 
Sbjct: 24  AAARAVRISRAALVNNRNKHPPSWCCRSSHNSNTALAGEAEFLTTDAGILNATSSSDSFR 83

Query: 313 KYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
           KY RLLPCP    PPR+EHLVV+E G VL++ICK LDLP
Sbjct: 84  KYDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLP 122


>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Glycine max]
          Length = 478

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 43/99 (43%), Positives = 56/99 (56%)
 Frame = +1

Query: 133 ASIALVRALTSALVVKKKHSKNLSCCSSFGSSNHRTCYASRASVEDAGTALSSSVSNGYP 312
           A+   VR   +ALV  +       CC S  +SN      +     DAG   ++S S+ + 
Sbjct: 24  AAARAVRISRAALVNNRNKHPPSWCCRSSHNSNTALAGEAEFLTTDAGILNATSSSDSFR 83

Query: 313 KYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
           KY RLLPCP    PPR+EHLVV+E G VL++ICK LDLP
Sbjct: 84  KYDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLP 122


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 477

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 56/120 (46%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
 Frame = +1

Query: 88  SLVSSLGTSNRRNFSASIALVRALT------SALVVKKKHSKNLSCCSSFGSSNHRTCYA 249
           SL S LG S  R+F A + LVR L       S  +   +H K           N R    
Sbjct: 5   SLASLLG-SGCRSFIAPVGLVRTLALTHVGLSEQLRSYQHVKVAWFSKKLKKKNKRVACE 63

Query: 250 SRASVEDAGTALSSSVSNGYPKYSRLLPCPLENGPPRVEHLVVTETGRVLDYICKTLDLP 429
           S        TA SS    GYP Y+RLLPCP +NGPPRVEHLVV+E G VL+YICK LDLP
Sbjct: 64  SLKEEVTYPTAASSVY--GYP-YTRLLPCPSQNGPPRVEHLVVSEGGPVLEYICKKLDLP 120