BLASTX nr result
ID: Cocculus23_contig00029755
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00029755
(303 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006584061.1| PREDICTED: multiple RNA-binding domain-conta... 82 1e-13
ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-conta... 80 3e-13
ref|XP_004508368.1| PREDICTED: glycine-rich RNA-binding protein ... 78 1e-12
ref|XP_006850782.1| hypothetical protein AMTR_s00025p00095750 [A... 75 1e-11
ref|XP_007154133.1| hypothetical protein PHAVU_003G093200g [Phas... 73 5e-11
ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chro... 71 2e-10
ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chro... 70 4e-10
emb|CBI26179.3| unnamed protein product [Vitis vinifera] 67 3e-09
gb|EYU43838.1| hypothetical protein MIMGU_mgv1a014975mg [Mimulus... 64 2e-08
ref|XP_006419805.1| hypothetical protein CICLE_v10006073mg [Citr... 59 9e-07
>ref|XP_006584061.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 157
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 303 ERRSGESLGFAYVWFDWEESAEMATKEMNGRFFGGRFIAVTIARPESHTSQVRATPYKF 127
+R SG+SLGFAY+WF EESA++A +EMNG+FF GRFI VTIA+P S S R T YKF
Sbjct: 99 DRESGQSLGFAYIWFVKEESAQLAVQEMNGKFFDGRFIYVTIAKPGSSKSSKRTTAYKF 157
>ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform X1 [Glycine max]
Length = 160
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 303 ERRSGESLGFAYVWFDWEESAEMATKEMNGRFFGGRFIAVTIARPESHTSQVRATPYKF 127
++ SG+SLGFAY+WF EESA++A EMNG+FF GRFI VTIA+P S S RAT YKF
Sbjct: 102 DKESGQSLGFAYIWFVKEESAQLAVLEMNGKFFYGRFIYVTIAKPGSSKSSKRATAYKF 160
>ref|XP_004508368.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Cicer arietinum]
Length = 162
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = -1
Query: 303 ERRSGESLGFAYVWFDWEESAEMATKEMNGRFFGGRFIAVTIARPESHTSQVRATPYKF 127
++ SG+SLGFAY+ FD EESA++A KEMNG+FF GRFI V+IA+P S S R T YKF
Sbjct: 104 DKESGQSLGFAYISFDKEESAQLAAKEMNGKFFDGRFIYVSIAKPGSSKSWKRTTAYKF 162
>ref|XP_006850782.1| hypothetical protein AMTR_s00025p00095750 [Amborella trichopoda]
gi|548854453|gb|ERN12363.1| hypothetical protein
AMTR_s00025p00095750 [Amborella trichopoda]
Length = 121
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/59 (54%), Positives = 48/59 (81%)
Frame = -1
Query: 303 ERRSGESLGFAYVWFDWEESAEMATKEMNGRFFGGRFIAVTIARPESHTSQVRATPYKF 127
+R S +SLGFAY+WF EE A++A K+M+G+FF GRF+ VT+A PE+ +++ +ATPY+F
Sbjct: 63 DRASKQSLGFAYIWFTCEEDAKLAVKKMDGKFFDGRFVHVTMAWPETLSNKRKATPYRF 121
>ref|XP_007154133.1| hypothetical protein PHAVU_003G093200g [Phaseolus vulgaris]
gi|561027487|gb|ESW26127.1| hypothetical protein
PHAVU_003G093200g [Phaseolus vulgaris]
Length = 161
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = -1
Query: 303 ERRSGESLGFAYVWFDWEESAEMATKEMNGRFFGGRFIAVTIARPESHTSQVRATPYKF 127
+ SG+SLGFA++WF EESA++A +EMNG+FF GRFI VTIA+P S T YKF
Sbjct: 103 DEESGQSLGFAFIWFVKEESAQLAIQEMNGKFFDGRFIYVTIAKPGSSKKLKGTTAYKF 161
>ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like [Solanum lycopersicum]
Length = 168
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = -1
Query: 303 ERRSGESLGFAYVWFDWEESAEMATKEMNGRFFGGRFIAVTIARPESHTSQVRATPYKF 127
+++S ESLGFAY+WF ESA+ A +EMNG+F GRFI V +A+P S V++ PYKF
Sbjct: 110 DKKSKESLGFAYIWFPDNESAQSAIREMNGKFLDGRFIQVQMAKPGSCKPNVKSMPYKF 168
>ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X1 [Solanum tuberosum]
Length = 168
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = -1
Query: 303 ERRSGESLGFAYVWFDWEESAEMATKEMNGRFFGGRFIAVTIARPESHTSQVRATPYKF 127
+++S ESLGFAY+WF ESA+ A +EMNG+F GRFI V +A+P S ++ PYKF
Sbjct: 110 DKKSKESLGFAYIWFPDNESAQAAVQEMNGKFLDGRFIQVQMAKPGSCKLNIKTMPYKF 168
>emb|CBI26179.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -1
Query: 294 SGESLGFAYVWFDWEESAEMATKEMNGRFFGGRFIAVTIARPESHTSQVRATPYKF 127
S + LGFA+ WF EESA++A K M+G+FF GRF+ V IA+P V+A PYKF
Sbjct: 101 SSQPLGFAFAWFTTEESAQLAVKMMDGKFFHGRFVFVKIAKPGPSKRHVKAAPYKF 156
>gb|EYU43838.1| hypothetical protein MIMGU_mgv1a014975mg [Mimulus guttatus]
Length = 172
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1
Query: 303 ERRSGESLGFAYVWFDWEESAEMATKEMNGRFFGGRFIAVTIARPESHTSQVRATPYKF 127
++++ + LGFAYVWF E+ A+ A EMNG FF GRFI V A+P S ++ +PYKF
Sbjct: 114 DKKTKQPLGFAYVWFAREDHAQAAVDEMNGHFFEGRFIRVAFAKPGSCKARSEPSPYKF 172
>ref|XP_006419805.1| hypothetical protein CICLE_v10006073mg [Citrus clementina]
gi|568872263|ref|XP_006489291.1| PREDICTED:
polyadenylate-binding protein RBP47C'-like isoform X1
[Citrus sinensis] gi|557521678|gb|ESR33045.1|
hypothetical protein CICLE_v10006073mg [Citrus
clementina]
Length = 167
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = -1
Query: 303 ERRSGESLGFAYVWFDWEESAEMATKEMNGRFFGGRFIAVTIARPESHTSQVRATPYKF 127
E+ S + LG A+VWF +ESA++A + MNG+FF GRFI V IA ++ R T YKF
Sbjct: 109 EKLSKQPLGSAFVWFSRKESADLAVENMNGKFFYGRFILVKIAEAGLSKNRGRRTRYKF 167