BLASTX nr result
ID: Cocculus23_contig00029739
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00029739
(386 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006488995.1| PREDICTED: putative ribonuclease H protein A... 73 3e-15
ref|XP_007210228.1| hypothetical protein PRUPE_ppa015539mg [Prun... 71 9e-15
ref|XP_007224193.1| hypothetical protein PRUPE_ppa017155mg, part... 69 3e-14
ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756... 66 2e-13
ref|XP_007203701.1| hypothetical protein PRUPE_ppa020995mg, part... 70 3e-13
ref|XP_007217321.1| hypothetical protein PRUPE_ppa019733mg [Prun... 80 3e-13
ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prun... 80 3e-13
ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, part... 61 6e-13
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam... 79 9e-13
ref|XP_007225095.1| hypothetical protein PRUPE_ppa016563mg, part... 78 1e-12
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam... 77 3e-12
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 73 4e-11
ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prun... 72 6e-11
ref|XP_007212800.1| hypothetical protein PRUPE_ppa020180mg [Prun... 72 1e-10
ref|XP_007207773.1| hypothetical protein PRUPE_ppa026368mg, part... 72 1e-10
ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prun... 71 2e-10
ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302... 69 5e-10
gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indi... 69 9e-10
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S... 68 1e-09
ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [S... 68 1e-09
>ref|XP_006488995.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 434
Score = 72.8 bits (177), Expect(3) = 3e-15
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = -2
Query: 283 RAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKASIF 110
+ IHW SWK +C+ K +GG+GF L FN+AL+ KQ WR+LH PD+L A LKA F
Sbjct: 16 KRSIHWSSWKRLCQAKTKGGLGFIDLSCFNQALIAKQEWRILHNPDSLMAKILKAKYF 73
Score = 33.5 bits (75), Expect(3) = 3e-15
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 131 VLKGKYFPTETFWEAKHRLGASQTSQSILWARELLQKGM 15
+LK KYF F +AK S +SILW R LL++G+
Sbjct: 67 ILKAKYFKGAGFMDAKLGSNPSFVWRSILWGRYLLKEGL 105
Score = 20.8 bits (42), Expect(3) = 3e-15
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = -3
Query: 309 KFWWGNT 289
+FWWG+T
Sbjct: 7 RFWWGST 13
>ref|XP_007210228.1| hypothetical protein PRUPE_ppa015539mg [Prunus persica]
gi|462405963|gb|EMJ11427.1| hypothetical protein
PRUPE_ppa015539mg [Prunus persica]
Length = 787
Score = 70.9 bits (172), Expect(2) = 9e-15
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = -2
Query: 346 QIHYVIYHFYDFQILVGKYFERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAW 167
+I V+ H++ G+ + IHWLSW +C K++GG+GFR L FN ALL KQ W
Sbjct: 412 EIQQVMAHYW-----WGEQDGQRKIHWLSWNKLCLPKQEGGLGFRNLYAFNMALLAKQLW 466
Query: 166 RLLHQPDALTALFLKASIF 110
RL+ P++L A LKA F
Sbjct: 467 RLIQTPNSLVARILKARYF 485
Score = 34.7 bits (78), Expect(2) = 9e-15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 131 VLKGKYFPTETFWEAKHRLGASQTSQSILWARELLQKGMRWRI 3
+LK +YF + EA+ S QS+ AR L++KG RWRI
Sbjct: 479 ILKARYFKNCSILEAQIGHSPSYIWQSLCKARVLIEKGSRWRI 521
>ref|XP_007224193.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
gi|462421129|gb|EMJ25392.1| hypothetical protein
PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 68.9 bits (167), Expect(2) = 3e-14
Identities = 30/55 (54%), Positives = 37/55 (67%)
Frame = -2
Query: 274 IHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKASIF 110
IHWLSW +C K++GG+GFR L FN LL KQ WRL+ P++L A LKA F
Sbjct: 649 IHWLSWNKLCLPKQEGGLGFRNLYAFNMVLLAKQLWRLIQTPNSLVARILKARYF 703
Score = 34.7 bits (78), Expect(2) = 3e-14
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 131 VLKGKYFPTETFWEAKHRLGASQTSQSILWARELLQKGMRWRI 3
+LK +YF + EA+ S QS+ AR L++KG RWRI
Sbjct: 697 ILKARYFKNCSILEAQIGHSPSYIWQSLCKARVLIEKGSRWRI 739
>ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756955 [Setaria italica]
Length = 1203
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = -2
Query: 286 ERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKASIF 110
E +HW W MC K +GGMGFR L+ FN A+L KQAWRLL +P++L A L+A +
Sbjct: 698 EHRRMHWQEWWKMCLPKDKGGMGFRDLQSFNLAMLAKQAWRLLCEPESLCARVLRARYY 756
Score = 35.0 bits (79), Expect(2) = 2e-13
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -1
Query: 131 VLKGKYFPTETFWEAKHRLGASQTSQSILWARELLQKGMRWRI 3
VL+ +Y+P +A+++ G+S T QSIL E + G WR+
Sbjct: 750 VLRARYYPNGKLLQARNKNGSSFTWQSILAGLECFKHGYIWRV 792
>ref|XP_007203701.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
gi|462399232|gb|EMJ04900.1| hypothetical protein
PRUPE_ppa020995mg, partial [Prunus persica]
Length = 1367
Score = 70.5 bits (171), Expect(2) = 3e-13
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -2
Query: 274 IHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKASIF 110
IHWLSW +C K++GG+GFR L FN ALL KQ WRL+ P++L A LKA F
Sbjct: 1085 IHWLSWNKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVARILKARYF 1139
Score = 30.0 bits (66), Expect(2) = 3e-13
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 131 VLKGKYFPTETFWEAKHRLGASQTSQSILWARELLQKGMRWRI 3
+LK +YF + EA+ S QS+ AR L++K +WRI
Sbjct: 1133 ILKARYFKNCSILEAQIGHSPSYIWQSLCKARVLIEKESQWRI 1175
>ref|XP_007217321.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
gi|462413471|gb|EMJ18520.1| hypothetical protein
PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = -2
Query: 298 GKYFERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKA 119
G+ E IHW+ W+ +CK K +GGMGFR L+ FN A+L KQ WRL+H P +L + LKA
Sbjct: 766 GQQGENRKIHWMRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKA 825
Query: 118 SIFLQKHF 95
F Q +F
Sbjct: 826 KYFPQTNF 833
>ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
gi|462398983|gb|EMJ04651.1| hypothetical protein
PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = -2
Query: 298 GKYFERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKA 119
G+ E IHW+ W+ +CK K +GGMGFR L+ FN A+L KQ WRL+H P +L + LKA
Sbjct: 1246 GQQGENRKIHWMRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKA 1305
Query: 118 SIFLQKHF 95
F Q +F
Sbjct: 1306 KYFPQTNF 1313
>ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, partial [Prunus persica]
gi|462395001|gb|EMJ00800.1| hypothetical protein
PRUPE_ppa023095mg, partial [Prunus persica]
Length = 933
Score = 60.8 bits (146), Expect(2) = 6e-13
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = -2
Query: 298 GKYFERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKA 119
G+ + +HW++W + + K +GGMGFR L FN ALL KQ WR+L +P +L LK
Sbjct: 410 GQIGDNRKLHWINWDTLGQPKHEGGMGFRNLHKFNLALLAKQCWRILIEPQSLWVKVLKG 469
Query: 118 SIF 110
F
Sbjct: 470 RYF 472
Score = 38.5 bits (88), Expect(2) = 6e-13
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -1
Query: 131 VLKGKYFPTETFWEAKHRLGASQTSQSILWARELLQKGMRWRI 3
VLKG+YFP +F EAK S S+L R++L +G W++
Sbjct: 466 VLKGRYFPNVSFLEAKKSGRTSWAWASLLEGRDILLRGAHWQV 508
>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 78.6 bits (192), Expect = 9e-13
Identities = 36/64 (56%), Positives = 42/64 (65%)
Frame = -2
Query: 286 ERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKASIFL 107
E IHW SWK +CK+K QGGMGFR L+ FN ALL KQ WRL+ +P +L A KA F
Sbjct: 81 ETRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFP 140
Query: 106 QKHF 95
Q F
Sbjct: 141 QTSF 144
>ref|XP_007225095.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
gi|462422031|gb|EMJ26294.1| hypothetical protein
PRUPE_ppa016563mg, partial [Prunus persica]
Length = 925
Score = 78.2 bits (191), Expect = 1e-12
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = -2
Query: 298 GKYFERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKA 119
G+ E IHW+ W+ +CK K +GGMGFR L+ FN A+L KQ WRL+H P +L + LKA
Sbjct: 397 GQQGENRKIHWMRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKA 456
Query: 118 SIFLQKHF 95
F +F
Sbjct: 457 KYFPHTNF 464
>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/68 (52%), Positives = 43/68 (63%)
Frame = -2
Query: 298 GKYFERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKA 119
G+ E IHW SWK +CK+K +GGMGFR L+ FN ALL KQ WRL +P +L A KA
Sbjct: 77 GQKEETRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKA 136
Query: 118 SIFLQKHF 95
F Q F
Sbjct: 137 RYFPQTSF 144
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 73.2 bits (178), Expect = 4e-11
Identities = 32/56 (57%), Positives = 39/56 (69%)
Frame = -2
Query: 277 GIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKASIF 110
GIHW W +C +K+ GG+GFR L FN+ALLGKQ WRL+ PD+L A LKA F
Sbjct: 1122 GIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYF 1177
>ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
gi|462424248|gb|EMJ28511.1| hypothetical protein
PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/64 (50%), Positives = 39/64 (60%)
Frame = -2
Query: 286 ERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKASIFL 107
E IHW++W +C K +GG+GFR L FN ALL KQ WRLL PD+L LKA F
Sbjct: 477 ENKKIHWMAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLVTKVLKAKYFP 536
Query: 106 QKHF 95
+ F
Sbjct: 537 TRSF 540
>ref|XP_007212800.1| hypothetical protein PRUPE_ppa020180mg [Prunus persica]
gi|462408665|gb|EMJ13999.1| hypothetical protein
PRUPE_ppa020180mg [Prunus persica]
Length = 1072
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = -2
Query: 286 ERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKA 119
++ GIHW+ W+ +CK+K GG+GFR LE FN+ALL KQ WR+L P++L A +A
Sbjct: 785 DKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRA 840
>ref|XP_007207773.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
gi|462403415|gb|EMJ08972.1| hypothetical protein
PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = -2
Query: 286 ERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKA 119
++ GIHW+ W+ +CK+K GG+GFR LE FN+ALL KQ WR+L P++L A +A
Sbjct: 535 DKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRA 590
>ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
gi|462398875|gb|EMJ04543.1| hypothetical protein
PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -2
Query: 274 IHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKASIF 110
IHWLSW +C K++GG+GFR L FN ALL KQ WRL+ P++L A LKA F
Sbjct: 1199 IHWLSWNKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVACILKARYF 1253
>ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302635 [Fragaria vesca
subsp. vesca]
Length = 913
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -2
Query: 298 GKYFERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKA 119
GK + GIHW W +C+ K++GG+GFR LEGFN+ALL K WR++ PD++ L A
Sbjct: 387 GKKGNKRGIHWCKWDLLCRNKKEGGLGFRDLEGFNQALLAKTVWRIVLHPDSIINRVLHA 446
>gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indica Group]
Length = 961
Score = 68.6 bits (166), Expect = 9e-10
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = -2
Query: 274 IHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKASIF 110
+HW+SW+ + K K QGG+GFR L+ FN+ALL +QAWRL+ P +L A LKA F
Sbjct: 576 VHWISWQQLIKPKGQGGIGFRDLKLFNQALLARQAWRLIQYPSSLCAQVLKAKYF 630
>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
gi|241922442|gb|EER95586.1| hypothetical protein
SORBIDRAFT_01g048580 [Sorghum bicolor]
Length = 517
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Frame = -2
Query: 316 DFQILVGKYF-----ERAGIHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQ 152
D +VG+Y+ + IHWLSW+ + +K++GG+GFR L FN A+L +QAWR+L +
Sbjct: 241 DLSSMVGRYWWSEQDKTNKIHWLSWEKLTLSKKRGGLGFRDLYHFNLAMLARQAWRILIE 300
Query: 151 PDALTALFLKASIF 110
PD L LKA F
Sbjct: 301 PDTLCGRVLKARYF 314
>ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [Sorghum bicolor]
gi|241917195|gb|EER90339.1| hypothetical protein
SORBIDRAFT_10g029210 [Sorghum bicolor]
Length = 240
Score = 68.2 bits (165), Expect = 1e-09
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = -2
Query: 274 IHWLSWKGMCKTKRQGGMGFRILEGFNKALLGKQAWRLLHQPDALTALFLKASIF 110
+HW+SW MC+ K +GG+GFR L FN A+L +QAWRLL PD+L LKA +
Sbjct: 80 MHWISWDTMCRRKEEGGLGFRDLHLFNLAMLARQAWRLLMTPDSLCGQVLKAKYY 134