BLASTX nr result

ID: Cocculus23_contig00029636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00029636
         (523 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446681.1| hypothetical protein SORBIDRAFT_06g020470 [S...    57   2e-06

>ref|XP_002446681.1| hypothetical protein SORBIDRAFT_06g020470 [Sorghum bicolor]
            gi|241937864|gb|EES11009.1| hypothetical protein
            SORBIDRAFT_06g020470 [Sorghum bicolor]
          Length = 855

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/116 (37%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
 Frame = -2

Query: 348  RSYGTLSGSSIQDDSRKRSQLRGHSPKLDEINHEIQVLSIQDLQ------AAKTQSSLQS 187
            RS  T + S   D +R       +S  + E  H    +   DLQ        K Q  L S
Sbjct: 722  RSTLTSNRSMTDDLTRTCRSETNYSKGVSEHGH-FDSIQEPDLQPNCFSRTLKLQKKLLS 780

Query: 186  PDGSHKICLRVQPQDKFELTIP*KPPFETYFCANSPYILCSSSNTLGN-SSRDADL 22
               +H ICLR+QP +K +  +P K  F+TYFCA  PY  CS SN+    SSRD DL
Sbjct: 781  SGAAHTICLRIQPHNKMDF-LP-KKEFDTYFCAYEPYEQCSRSNSRATYSSRDDDL 834


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