BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00029589
         (466 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ73425.1| hypothetical protein RF2, partial (chloroplast) [...    77   2e-12
gb|AEZ48748.1| hypothetical chloroplast RF2, partial [Phormium t...    77   2e-12
gb|AEX93974.1| hypothetical chloroplast RF21 (chloroplast) [Ozir...    77   2e-12
gb|AEX93969.1| hypothetical chloroplast RF21 (chloroplast) [Phor...    77   2e-12
gb|AFJ80093.1| hypothetical protein RF2, partial (chloroplast) [...    76   4e-12
ref|YP_001294396.1| hypothetical chloroplast RF2 [Dioscorea elep...    76   4e-12
ref|YP_009026481.1| Ycf2 (chloroplast) [Dendrobium officinale] g...    76   6e-12
ref|YP_008081939.1| Ycf2 (chloroplast) [Cymbidium mannii] gi|511...    76   6e-12
ref|YP_008081861.1| Ycf2 (chloroplast) [Cymbidium tracyanum] gi|...    76   6e-12
gb|AGK25548.1| Ycf2 (chloroplast) [Cymbidium mannii] gi|48266232...    76   6e-12
ref|YP_008081783.1| Ycf2 (chloroplast) [Cymbidium tortisepalum] ...    76   6e-12
ref|YP_008081705.1| Ycf2 (chloroplast) [Cymbidium sinense] gi|51...    76   6e-12
ref|YP_008081627.1| Ycf2 (chloroplast) [Cymbidium aloifolium] gi...    76   6e-12
ref|YP_006503733.1| hypothetical chloroplast RF21 (chloroplast) ...    76   6e-12
gb|AFJ80098.1| hypothetical protein RF2, partial (chloroplast) [...    76   6e-12
gb|AFJ80097.1| hypothetical protein RF2, partial (chloroplast) [...    76   6e-12
gb|AFJ80096.1| hypothetical protein RF2, partial (chloroplast) [...    76   6e-12
gb|AFJ80095.1| hypothetical protein RF2, partial (chloroplast) [...    76   6e-12
gb|AFJ80094.1| hypothetical protein RF2, partial (chloroplast) [...    76   6e-12
gb|AFJ80092.1| hypothetical protein RF2, partial (chloroplast) [...    76   6e-12

>gb|AFJ73425.1| hypothetical protein RF2, partial (chloroplast) [Apostasia sp.
           G244]
          Length = 496

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = -3

Query: 443 LKIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
           LKID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 330 LKIDRFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYLSLGLL 373


>gb|AEZ48748.1| hypothetical chloroplast RF2, partial [Phormium tenax]
          Length = 2285

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KIDQFDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1709 KIDQFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYLSLGLL 1751


>gb|AEX93974.1| hypothetical chloroplast RF21 (chloroplast) [Oziroe biflora]
          Length = 2260

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KIDQFDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1689 KIDQFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYLSLGLL 1731


>gb|AEX93969.1| hypothetical chloroplast RF21 (chloroplast) [Phormium tenax]
          Length = 2278

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KIDQFDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1702 KIDQFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYLSLGLL 1744


>gb|AFJ80093.1| hypothetical protein RF2, partial (chloroplast) [Cypripedium
           margaritaceum]
          Length = 490

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = -3

Query: 440 KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALIWFCQ 300
           KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L   C+
Sbjct: 330 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLSRDCE 376


>ref|YP_001294396.1| hypothetical chloroplast RF2 [Dioscorea elephantipes]
            gi|149390416|ref|YP_001294415.1| hypothetical chloroplast
            RF2 [Dioscorea elephantipes]
            gi|205412894|sp|A6MMQ1.1|YCF2_DIOEL RecName: Full=Protein
            Ycf2 gi|148668089|gb|ABR01473.1| hypothetical chloroplast
            RF2 [Dioscorea elephantipes] gi|148668108|gb|ABR01492.1|
            hypothetical chloroplast RF2 [Dioscorea elephantipes]
          Length = 2260

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KIDQFDIT+QFE +KA+SPCIIWIPNI DL VNESNYLS+ L+
Sbjct: 1686 KIDQFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYLSIGLL 1728


>ref|YP_009026481.1| Ycf2 (chloroplast) [Dendrobium officinale]
            gi|618750354|ref|YP_009026491.1| Ycf2 (chloroplast)
            [Dendrobium officinale] gi|507474363|gb|AGM48239.1| Ycf2
            (chloroplast) [Dendrobium officinale]
            gi|507474372|gb|AGM48248.1| Ycf2 (chloroplast)
            [Dendrobium officinale]
          Length = 2289

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1711 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 1753


>ref|YP_008081939.1| Ycf2 (chloroplast) [Cymbidium mannii]
            gi|511943551|ref|YP_008081928.1| Ycf2 (chloroplast)
            [Cymbidium mannii] gi|482662560|gb|AGK25782.1| Ycf2
            (chloroplast) [Cymbidium mannii]
            gi|482662561|gb|AGK25783.1| Ycf2 (chloroplast) [Cymbidium
            mannii]
          Length = 2289

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1709 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 1751


>ref|YP_008081861.1| Ycf2 (chloroplast) [Cymbidium tracyanum]
            gi|511943450|ref|YP_008081850.1| Ycf2 (chloroplast)
            [Cymbidium tracyanum] gi|482662402|gb|AGK25626.1| Ycf2
            (chloroplast) [Cymbidium tracyanum]
            gi|482662403|gb|AGK25627.1| Ycf2 (chloroplast) [Cymbidium
            tracyanum]
          Length = 2282

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1702 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 1744


>gb|AGK25548.1| Ycf2 (chloroplast) [Cymbidium mannii] gi|482662324|gb|AGK25549.1|
            Ycf2 (chloroplast) [Cymbidium mannii]
          Length = 2251

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1671 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 1713


>ref|YP_008081783.1| Ycf2 (chloroplast) [Cymbidium tortisepalum]
            gi|512721398|ref|YP_008081772.1| Ycf2 (chloroplast)
            [Cymbidium tortisepalum] gi|482662165|gb|AGK25392.1| Ycf2
            (chloroplast) [Cymbidium tortisepalum]
            gi|482662166|gb|AGK25393.1| Ycf2 (chloroplast) [Cymbidium
            tortisepalum] gi|482662244|gb|AGK25470.1| Ycf2
            (chloroplast) [Cymbidium tortisepalum]
            gi|482662245|gb|AGK25471.1| Ycf2 (chloroplast) [Cymbidium
            tortisepalum] gi|482662481|gb|AGK25704.1| Ycf2
            (chloroplast) [Cymbidium tortisepalum]
            gi|482662482|gb|AGK25705.1| Ycf2 (chloroplast) [Cymbidium
            tortisepalum]
          Length = 2285

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1705 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 1747


>ref|YP_008081705.1| Ycf2 (chloroplast) [Cymbidium sinense]
            gi|511943337|ref|YP_008081694.1| Ycf2 (chloroplast)
            [Cymbidium sinense] gi|482662086|gb|AGK25314.1| Ycf2
            (chloroplast) [Cymbidium sinense]
            gi|482662087|gb|AGK25315.1| Ycf2 (chloroplast) [Cymbidium
            sinense]
          Length = 2288

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1708 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 1750


>ref|YP_008081627.1| Ycf2 (chloroplast) [Cymbidium aloifolium]
            gi|520850487|ref|YP_008081616.1| Ycf2 (chloroplast)
            [Cymbidium aloifolium] gi|482662007|gb|AGK25236.1| Ycf2
            (chloroplast) [Cymbidium aloifolium]
            gi|482662008|gb|AGK25237.1| Ycf2 (chloroplast) [Cymbidium
            aloifolium]
          Length = 2289

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1709 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 1751


>ref|YP_006503733.1| hypothetical chloroplast RF21 (chloroplast) [Erycina pusilla]
            gi|395001724|ref|YP_006503740.1| hypothetical chloroplast
            RF21 (chloroplast) [Erycina pusilla]
            gi|339431345|gb|AEJ72539.1| hypothetical chloroplast RF21
            (chloroplast) [Erycina pusilla]
            gi|339431353|gb|AEJ72547.1| hypothetical chloroplast RF21
            (chloroplast) [Erycina pusilla]
          Length = 2225

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440  KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
            KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 1645 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 1687


>gb|AFJ80098.1| hypothetical protein RF2, partial (chloroplast) [Cypripedium
           irapeanum] gi|387569786|gb|AFJ80099.1| hypothetical
           protein RF2, partial (chloroplast) [Cypripedium molle]
          Length = 493

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440 KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
           KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 328 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 370


>gb|AFJ80097.1| hypothetical protein RF2, partial (chloroplast) [Cypripedium
           subtropicum]
          Length = 495

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440 KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
           KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 330 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 372


>gb|AFJ80096.1| hypothetical protein RF2, partial (chloroplast) [Cypripedium
           debile]
          Length = 485

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440 KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
           KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 320 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 362


>gb|AFJ80095.1| hypothetical protein RF2, partial (chloroplast) [Cypripedium
           acaule]
          Length = 504

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440 KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
           KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 339 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 381


>gb|AFJ80094.1| hypothetical protein RF2, partial (chloroplast) [Cypripedium
           palangshanense]
          Length = 494

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440 KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
           KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 329 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 371


>gb|AFJ80092.1| hypothetical protein RF2, partial (chloroplast) [Cypripedium
           californicum]
          Length = 496

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 440 KIDQFDITIQFEFSKAISPCIIWIPNIQDLSVNESNYLSLALI 312
           KID+FDIT+QFE +KA+SPCIIWIPNI DL VNESNYLSL L+
Sbjct: 331 KIDRFDITLQFELAKAMSPCIIWIPNIHDLHVNESNYLSLGLL 373