BLASTX nr result
ID: Cocculus23_contig00028895
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00028895
(375 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007034826.1| Rna-directed dna methylation 1 isoform 1 [Th... 94 2e-17
ref|XP_002311634.1| hypothetical protein POPTR_0008s15560g [Popu... 93 3e-17
ref|XP_004298016.1| PREDICTED: protein RDM1-like [Fragaria vesca... 89 6e-16
gb|EXB51132.1| hypothetical protein L484_009096 [Morus notabilis] 89 8e-16
ref|XP_007223423.1| hypothetical protein PRUPE_ppa010153mg [Prun... 86 5e-15
ref|XP_004294547.1| PREDICTED: protein RDM1-like [Fragaria vesca... 86 7e-15
ref|XP_002517093.1| conserved hypothetical protein [Ricinus comm... 84 2e-14
ref|XP_002883375.1| predicted protein [Arabidopsis lyrata subsp.... 84 3e-14
ref|XP_002279112.2| PREDICTED: protein RDM1 [Vitis vinifera] 82 6e-14
emb|CBI26288.3| unnamed protein product [Vitis vinifera] 82 6e-14
ref|XP_006419997.1| hypothetical protein CICLE_v10005993mg [Citr... 82 8e-14
ref|XP_006419996.1| hypothetical protein CICLE_v10005993mg [Citr... 82 8e-14
ref|XP_004511455.1| PREDICTED: uncharacterized protein LOC101512... 82 1e-13
ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucu... 82 1e-13
ref|XP_006489435.1| PREDICTED: protein RDM1-like [Citrus sinensis] 81 1e-13
ref|XP_006298700.1| hypothetical protein CARUB_v10014795mg [Caps... 81 1e-13
pdb|1VK5|A Chain A, X-Ray Structure Of Gene Product From Arabido... 81 1e-13
ref|NP_188907.2| RNA-directed DNA methylation 1 protein [Arabido... 81 1e-13
ref|XP_004511382.1| PREDICTED: protein RDM1-like isoform X6 [Cic... 79 8e-13
ref|XP_004511381.1| PREDICTED: protein RDM1-like isoform X5 [Cic... 79 8e-13
>ref|XP_007034826.1| Rna-directed dna methylation 1 isoform 1 [Theobroma cacao]
gi|508713855|gb|EOY05752.1| Rna-directed dna methylation
1 isoform 1 [Theobroma cacao]
Length = 176
Score = 94.0 bits (232), Expect = 2e-17
Identities = 36/48 (75%), Positives = 45/48 (93%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
++HPCKAEAT+WL+E++HR T+SHHH+AKLWQ DPMHHAFVD IFPK+
Sbjct: 129 VIHPCKAEATVWLVEELHRCTSSHHHMAKLWQSDPMHHAFVDSIFPKL 176
>ref|XP_002311634.1| hypothetical protein POPTR_0008s15560g [Populus trichocarpa]
gi|566184159|ref|XP_006379848.1| hypothetical protein
POPTR_0008s15560g [Populus trichocarpa]
gi|222851454|gb|EEE89001.1| hypothetical protein
POPTR_0008s15560g [Populus trichocarpa]
gi|550333149|gb|ERP57645.1| hypothetical protein
POPTR_0008s15560g [Populus trichocarpa]
Length = 175
Score = 93.2 bits (230), Expect = 3e-17
Identities = 37/48 (77%), Positives = 45/48 (93%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
++HPCKAEATIWL+E+VHR T+SHHH+AK+WQ DPMHHAFVD IFPK+
Sbjct: 128 MIHPCKAEATIWLVEEVHRRTSSHHHVAKIWQSDPMHHAFVDSIFPKL 175
>ref|XP_004298016.1| PREDICTED: protein RDM1-like [Fragaria vesca subsp. vesca]
Length = 167
Score = 89.0 bits (219), Expect = 6e-16
Identities = 37/51 (72%), Positives = 45/51 (88%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI*NS 223
I+HPCKAEATIWLIE+VHR T+SHHH+A +W DPMHHAFVD IFP++ +S
Sbjct: 116 IIHPCKAEATIWLIEEVHRNTSSHHHVANMWLADPMHHAFVDSIFPQLDSS 166
>gb|EXB51132.1| hypothetical protein L484_009096 [Morus notabilis]
Length = 184
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/48 (77%), Positives = 44/48 (91%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
I+HP KAEATIWL+E+VHR TTSH+H+AKLW LDPMHHAFVD IFP++
Sbjct: 137 IVHPSKAEATIWLLEEVHRRTTSHYHIAKLWLLDPMHHAFVDSIFPQL 184
>ref|XP_007223423.1| hypothetical protein PRUPE_ppa010153mg [Prunus persica]
gi|462420359|gb|EMJ24622.1| hypothetical protein
PRUPE_ppa010153mg [Prunus persica]
Length = 261
Score = 85.9 bits (211), Expect = 5e-15
Identities = 35/48 (72%), Positives = 43/48 (89%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
I+HPCKAEATIWL+E+VHR T+SH+H+A LW DPMHHAFVD IFP++
Sbjct: 210 IIHPCKAEATIWLMEEVHRHTSSHYHIANLWLSDPMHHAFVDSIFPQL 257
>ref|XP_004294547.1| PREDICTED: protein RDM1-like [Fragaria vesca subsp. vesca]
Length = 167
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/51 (70%), Positives = 44/51 (86%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI*NS 223
I+HP KAE TIWLIE+VHR T+SHHH+A +W LDPMHHAFVD IFP++ +S
Sbjct: 116 IIHPSKAEVTIWLIEEVHRNTSSHHHVANMWLLDPMHHAFVDSIFPQLDSS 166
>ref|XP_002517093.1| conserved hypothetical protein [Ricinus communis]
gi|223543728|gb|EEF45256.1| conserved hypothetical
protein [Ricinus communis]
Length = 175
Score = 84.0 bits (206), Expect = 2e-14
Identities = 32/48 (66%), Positives = 43/48 (89%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
++HPCKAEA++WL+E++HR T+S H++AKLW LDPMHHAFVD IFP +
Sbjct: 128 VIHPCKAEASVWLVEEIHRCTSSPHYVAKLWLLDPMHHAFVDSIFPPL 175
>ref|XP_002883375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329215|gb|EFH59634.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 83.6 bits (205), Expect = 3e-14
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
I HP KAEATIWL+E++HR+T+SH H+A LW DPM+H+F+DPIFPKI
Sbjct: 116 IFHPSKAEATIWLVEEIHRITSSHLHIASLWGSDPMYHSFIDPIFPKI 163
>ref|XP_002279112.2| PREDICTED: protein RDM1 [Vitis vinifera]
Length = 137
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
I+HP KAEA+IWLIE+VHR TTS HH+AKLW DPMH+AFVD IFP+I
Sbjct: 90 IIHPSKAEASIWLIEEVHRQTTSPHHMAKLWLSDPMHYAFVDSIFPQI 137
>emb|CBI26288.3| unnamed protein product [Vitis vinifera]
Length = 174
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
I+HP KAEA+IWLIE+VHR TTS HH+AKLW DPMH+AFVD IFP+I
Sbjct: 127 IIHPSKAEASIWLIEEVHRQTTSPHHMAKLWLSDPMHYAFVDSIFPQI 174
>ref|XP_006419997.1| hypothetical protein CICLE_v10005993mg [Citrus clementina]
gi|557521870|gb|ESR33237.1| hypothetical protein
CICLE_v10005993mg [Citrus clementina]
Length = 162
Score = 82.0 bits (201), Expect = 8e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPI 244
I+HPCKAEAT+WLIE+VHRLT+ HHHLAKLW DPMH+ F+D I
Sbjct: 100 IVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 143
>ref|XP_006419996.1| hypothetical protein CICLE_v10005993mg [Citrus clementina]
gi|557521869|gb|ESR33236.1| hypothetical protein
CICLE_v10005993mg [Citrus clementina]
Length = 187
Score = 82.0 bits (201), Expect = 8e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPI 244
I+HPCKAEAT+WLIE+VHRLT+ HHHLAKLW DPMH+ F+D I
Sbjct: 125 IVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
>ref|XP_004511455.1| PREDICTED: uncharacterized protein LOC101512373 [Cicer arietinum]
Length = 350
Score = 81.6 bits (200), Expect = 1e-13
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
I+HPCKAEATIWL+EQ+HR T+SH H+A LW++DPM++ FVD IFP I
Sbjct: 299 IIHPCKAEATIWLMEQIHRQTSSHFHIANLWKVDPMYNGFVDSIFPTI 346
>ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus]
gi|449432682|ref|XP_004134128.1| PREDICTED: protein
RDM1-like isoform 2 [Cucumis sativus]
gi|449504162|ref|XP_004162269.1| PREDICTED: protein
RDM1-like isoform 1 [Cucumis sativus]
gi|449504166|ref|XP_004162270.1| PREDICTED: protein
RDM1-like isoform 2 [Cucumis sativus]
Length = 174
Score = 81.6 bits (200), Expect = 1e-13
Identities = 31/48 (64%), Positives = 42/48 (87%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
++HP KAEAT+WL+E++HR T+SHHH+AKLW DPMH A+VD IFP++
Sbjct: 127 VIHPSKAEATVWLVEEIHRRTSSHHHVAKLWLSDPMHQAYVDSIFPQL 174
>ref|XP_006489435.1| PREDICTED: protein RDM1-like [Citrus sinensis]
Length = 187
Score = 81.3 bits (199), Expect = 1e-13
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPI 244
++HPCKAEAT+WLIE+VHRLT+ HHHLAKLW DPMH+ F+D I
Sbjct: 125 LVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
>ref|XP_006298700.1| hypothetical protein CARUB_v10014795mg [Capsella rubella]
gi|482567409|gb|EOA31598.1| hypothetical protein
CARUB_v10014795mg [Capsella rubella]
Length = 165
Score = 81.3 bits (199), Expect = 1e-13
Identities = 31/47 (65%), Positives = 42/47 (89%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPK 235
I+HP KAEATIWL+E++HR+T+SH H+A LW DPM+H+F+DPIFP+
Sbjct: 118 IIHPSKAEATIWLVEEIHRITSSHLHIAHLWSSDPMYHSFIDPIFPE 164
>pdb|1VK5|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At3g22680 gi|150261463|pdb|2Q3T|A Chain A, Ensemble
Refinement Of The Protein Crystal Structure Of Gene
Product From Arabidopsis Thaliana At3g22680
Length = 157
Score = 81.3 bits (199), Expect = 1e-13
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPK 235
I+HP KAEATIWL+E++HRLT SH H+A LW+ DPM+H+F+DPIFP+
Sbjct: 110 IIHPTKAEATIWLVEEIHRLTPSHLHMALLWRSDPMYHSFIDPIFPE 156
>ref|NP_188907.2| RNA-directed DNA methylation 1 protein [Arabidopsis thaliana]
gi|73921107|sp|Q9LUJ3.1|RDM1_ARATH RecName: Full=Protein
RDM1; AltName: Full=Protein RNA-directed DNA methylation
1 gi|9279686|dbj|BAB01243.1| unnamed protein product
[Arabidopsis thaliana] gi|332643143|gb|AEE76664.1|
RNA-directed DNA methylation 1 protein [Arabidopsis
thaliana]
Length = 163
Score = 81.3 bits (199), Expect = 1e-13
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPK 235
I+HP KAEATIWL+E++HRLT SH H+A LW+ DPM+H+F+DPIFP+
Sbjct: 116 IIHPTKAEATIWLVEEIHRLTPSHLHMALLWRSDPMYHSFIDPIFPE 162
>ref|XP_004511382.1| PREDICTED: protein RDM1-like isoform X6 [Cicer arietinum]
gi|502159068|ref|XP_004511383.1| PREDICTED: protein
RDM1-like isoform X7 [Cicer arietinum]
Length = 160
Score = 78.6 bits (192), Expect = 8e-13
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
I+HP KAEAT+WLIE++HR T+SH H+A LW+ DPM+H FVD IFP +
Sbjct: 109 IIHPSKAEATVWLIEEIHRQTSSHFHIANLWKTDPMYHGFVDSIFPTL 156
>ref|XP_004511381.1| PREDICTED: protein RDM1-like isoform X5 [Cicer arietinum]
Length = 167
Score = 78.6 bits (192), Expect = 8e-13
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = -1
Query: 375 IMHPCKAEATIWLIEQVHRLTTSHHHLAKLWQLDPMHHAFVDPIFPKI 232
I+HP KAEAT+WLIE++HR T+SH H+A LW+ DPM+H FVD IFP +
Sbjct: 116 IIHPSKAEATVWLIEEIHRQTSSHFHIANLWKTDPMYHGFVDSIFPTL 163