BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00028846
         (713 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40382.3| unnamed protein product [Vitis vinifera]               85   2e-14
ref|XP_002274925.1| PREDICTED: protein PAIR1-like [Vitis vinifera]     85   2e-14
ref|XP_007051794.1| Recombination initiation defects 3, putative...    73   8e-11
ref|XP_007051795.1| Recombination initiation defects 3, putative...    70   9e-10
ref|XP_002302589.2| hypothetical protein POPTR_0002s16140g [Popu...    63   1e-07
ref|XP_002320800.1| hypothetical protein POPTR_0014s08050g [Popu...    58   3e-06

>emb|CBI40382.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 49/96 (51%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
 Frame = +2

Query: 65  PICPSKTCTQKTLTPKIETANEGWVKPKAAFFSDRKQCVKHKQEEIPLIEQDGEWRVIID 244
           P+ P+K C Q TL PKIE  +   V+ + A F DR    + KQ  +  +E++ E RVIID
Sbjct: 244 PVLPTKVCMQATLPPKIEMGSWNSVQRERATFPDRNSNRQPKQNGVSPLERERECRVIID 303

Query: 245 SDEE--GGFSCLLEGRETGIGSNLVEEVKGEAERIL 346
           SDEE  GGFSCLL+ +E+  G++LVEEVK E ERIL
Sbjct: 304 SDEEIDGGFSCLLQEKES--GNHLVEEVKEETERIL 337


>ref|XP_002274925.1| PREDICTED: protein PAIR1-like [Vitis vinifera]
          Length = 378

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 49/96 (51%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
 Frame = +2

Query: 65  PICPSKTCTQKTLTPKIETANEGWVKPKAAFFSDRKQCVKHKQEEIPLIEQDGEWRVIID 244
           P+ P+K C Q TL PKIE  +   V+ + A F DR    + KQ  +  +E++ E RVIID
Sbjct: 268 PVLPTKVCMQATLPPKIEMGSWNSVQRERATFPDRNSNRQPKQNGVSPLERERECRVIID 327

Query: 245 SDEE--GGFSCLLEGRETGIGSNLVEEVKGEAERIL 346
           SDEE  GGFSCLL+ +E+  G++LVEEVK E ERIL
Sbjct: 328 SDEEIDGGFSCLLQEKES--GNHLVEEVKEETERIL 361


>ref|XP_007051794.1| Recombination initiation defects 3, putative isoform 1 [Theobroma
           cacao] gi|590722082|ref|XP_007051797.1| Recombination
           initiation defects 3, putative isoform 1 [Theobroma
           cacao] gi|508704055|gb|EOX95951.1| Recombination
           initiation defects 3, putative isoform 1 [Theobroma
           cacao] gi|508704058|gb|EOX95954.1| Recombination
           initiation defects 3, putative isoform 1 [Theobroma
           cacao]
          Length = 401

 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = +2

Query: 74  PSKTCTQKTLTPKIETANEGWVKPKAAFFSDRKQCVKHKQEEIPLIEQDGEWRVIIDSDE 253
           P K   Q TL PK+ET     VK K +  ++R  C ++K++ +  IEQ+ ++R++I+SDE
Sbjct: 293 PPKVYEQPTLAPKVETGGWKSVKMKQSTINERAFCKENKRKGVSSIEQE-KYRILIESDE 351

Query: 254 E--GGFSCLLEGRETGIGSNLVEEVKGEAERIL 346
           E  GGFSCLL+ +E    ++L++E K E ERIL
Sbjct: 352 EMDGGFSCLLDDKERNRTNSLIKEAKEETERIL 384


>ref|XP_007051795.1| Recombination initiation defects 3, putative isoform 2 [Theobroma
           cacao] gi|590722079|ref|XP_007051796.1| Recombination
           initiation defects 3, putative isoform 2 [Theobroma
           cacao] gi|590722085|ref|XP_007051798.1| Recombination
           initiation defects 3, putative isoform 2 [Theobroma
           cacao] gi|508704056|gb|EOX95952.1| Recombination
           initiation defects 3, putative isoform 2 [Theobroma
           cacao] gi|508704057|gb|EOX95953.1| Recombination
           initiation defects 3, putative isoform 2 [Theobroma
           cacao] gi|508704059|gb|EOX95955.1| Recombination
           initiation defects 3, putative isoform 2 [Theobroma
           cacao]
          Length = 402

 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
 Frame = +2

Query: 74  PSKTCTQKTLTPKIETANEGWVKPKAAFFSDRKQCVKHKQEEIPLIEQDGEWRVIIDSDE 253
           P K   Q TL PK+ET     VK K +  ++R  C ++K++ +  IEQ+ ++R++I+SDE
Sbjct: 293 PPKVYEQPTLAPKVETGGWKSVKMKQSTINERAFCKENKRKGVSSIEQE-KYRILIESDE 351

Query: 254 E--GGFSCLLEGRETGIGSN-LVEEVKGEAERIL 346
           E  GGFSCLL+ +E    +N L++E K E ERIL
Sbjct: 352 EMDGGFSCLLDDKERKDRTNSLIKEAKEETERIL 385


>ref|XP_002302589.2| hypothetical protein POPTR_0002s16140g [Populus trichocarpa]
           gi|118481861|gb|ABK92867.1| unknown [Populus
           trichocarpa] gi|550345129|gb|EEE81862.2| hypothetical
           protein POPTR_0002s16140g [Populus trichocarpa]
          Length = 405

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = +2

Query: 62  SPICPSKTCTQKTLTPKIETANEGWVKPKAAFFSDRKQCVKHKQEEIPLIEQDGEWRVII 241
           +P  P K      + PK+ET     VK +   F+      + K+ ++   +Q+ + RVII
Sbjct: 292 NPALPPKVSVHAKIVPKMETGGWKSVKVEQRSFTRAASLREQKRNKVSSDQQEKQSRVII 351

Query: 242 DSDE--EGGFSCLLEGRETGIGSNLVEEVKGEAERIL 346
           DSDE  EGGFSCL++ +ETGI + +++  K E  RIL
Sbjct: 352 DSDEEIEGGFSCLIDVKETGIRNPILDVSKEETARIL 388


>ref|XP_002320800.1| hypothetical protein POPTR_0014s08050g [Populus trichocarpa]
           gi|222861573|gb|EEE99115.1| hypothetical protein
           POPTR_0014s08050g [Populus trichocarpa]
          Length = 354

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
 Frame = +2

Query: 62  SPICPSKTCTQKTLTPKIETANEGWVKPKAAFFSDRKQCVKHKQEEIPLIEQDGEWRVII 241
           +P    K   Q    P +E      VK K   F+      + K+  +   +Q+ + RVII
Sbjct: 241 NPTLLPKVAGQAETVPMVEMGGWKSVKVKQHTFTQAASLREQKRTRVSSDQQEEQSRVII 300

Query: 242 DSDEE--GGFSCLLEGRETGIGSNLVEEVKGEAERIL 346
           DSDEE  GGFSCLL+ +ETGI + ++ E K +  RIL
Sbjct: 301 DSDEEIDGGFSCLLDVKETGIRNPIIGESKEDTARIL 337